Heatmap: Cluster_268 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00126200 (evm_27.TU.AmTr_v1.0_scaffold00001.101)
1.0 1.0 0.57 0.11 0.27 0.0 0.08 0.08 0.12 0.12 0.94 0.97 0.79 0.5 0.54 0.33 0.74 0.89 0.66 0.65 0.51 0.54
AMTR_s00002p00270740 (evm_27.TU.AmTr_v1.0_scaffold00002.597)
1.0 0.97 0.05 0.11 0.11 0.0 0.0 0.0 0.0 0.0 0.7 0.44 0.59 0.35 0.21 0.13 0.31 0.25 0.17 0.2 0.22 0.17
AMTR_s00003p00264590 (evm_27.TU.AmTr_v1.0_scaffold00003.362)
0.0 1.0 0.67 0.12 0.09 0.02 0.06 0.0 0.11 0.09 0.77 0.57 0.48 0.42 0.29 0.38 0.52 0.53 0.48 0.41 0.27 0.45
AMTR_s00004p00111480 (evm_27.TU.AmTr_v1.0_scaffold00004.91)
0.64 0.37 0.17 0.11 0.19 0.0 0.06 0.04 0.1 0.09 0.75 1.0 0.4 0.31 0.41 0.48 0.61 0.47 0.44 0.4 0.49 0.37
AMTR_s00009p00263810 (evm_27.TU.AmTr_v1.0_scaffold00009.362)
0.4 1.0 0.7 0.08 0.32 0.02 0.09 0.09 0.12 0.11 0.93 0.87 0.8 0.52 0.46 0.62 0.73 0.59 0.52 0.6 0.33 0.7
AMTR_s00013p00201840 (evm_27.TU.AmTr_v1.0_scaffold00013.138)
1.0 0.49 0.27 0.01 0.23 0.0 0.3 0.0 0.21 0.21 0.62 0.5 0.55 0.38 0.34 0.48 0.54 0.35 0.43 0.49 0.45 0.46
AMTR_s00013p00202390 (evm_27.TU.AmTr_v1.0_scaffold00013.140)
1.0 0.54 0.26 0.01 0.26 0.08 0.07 0.0 0.07 0.09 0.67 0.44 0.89 0.48 0.49 0.33 0.73 0.48 0.62 0.78 0.36 0.5
AMTR_s00016p00258810 (evm_27.TU.AmTr_v1.0_scaffold00016.359)
0.93 0.33 0.5 0.01 0.35 0.08 0.24 0.12 0.17 0.2 0.94 0.7 0.63 0.53 0.55 0.52 1.0 0.46 0.49 0.65 0.28 0.61
AMTR_s00017p00058220 (evm_27.TU.AmTr_v1.0_scaffold00017.19)
0.77 1.0 0.21 0.11 0.03 0.0 0.0 0.0 0.01 0.01 0.52 0.59 0.46 0.28 0.18 0.19 0.46 0.48 0.33 0.28 0.31 0.41
AMTR_s00021p00231460 (evm_27.TU.AmTr_v1.0_scaffold00021.228)
0.85 0.46 0.09 0.11 0.33 0.26 0.16 0.08 0.29 0.24 0.67 0.72 0.48 0.4 0.43 0.14 1.0 0.62 0.54 0.36 0.66 0.51
AMTR_s00028p00234070 (evm_27.TU.AmTr_v1.0_scaffold00028.115)
1.0 0.14 0.54 0.1 0.38 0.05 0.15 0.07 0.16 0.16 0.91 0.84 0.65 0.58 0.44 0.84 0.8 0.65 0.6 0.59 0.46 0.54
AMTR_s00029p00247460 (evm_27.TU.AmTr_v1.0_scaffold00029.446)
1.0 0.71 0.43 0.14 0.13 0.01 0.04 0.02 0.03 0.03 0.68 0.46 0.36 0.14 0.22 0.22 0.36 0.42 0.37 0.38 0.15 0.27
AMTR_s00035p00224680 (evm_27.TU.AmTr_v1.0_scaffold00035.51)
0.89 0.57 1.0 0.18 0.46 0.02 0.07 0.04 0.37 0.17 0.75 0.6 0.66 0.48 0.53 0.78 0.74 0.55 0.48 0.6 0.59 0.65
AMTR_s00038p00015530 (evm_27.TU.AmTr_v1.0_scaffold00038.2)
0.35 0.2 0.28 0.02 0.21 0.19 0.02 0.0 0.05 0.03 1.0 0.67 0.33 0.14 0.22 0.29 0.57 0.41 0.5 0.48 0.2 0.35
AMTR_s00039p00209870 (evm_27.TU.AmTr_v1.0_scaffold00039.178)
0.37 0.35 0.08 0.24 0.22 0.0 0.0 0.0 0.03 0.01 1.0 0.89 0.63 0.16 0.34 0.48 0.68 0.55 0.45 0.47 0.42 0.44
AMTR_s00040p00235870 (evm_27.TU.AmTr_v1.0_scaffold00040.305)
0.52 0.42 0.92 0.15 0.4 0.03 0.17 0.0 0.16 0.18 1.0 0.5 0.41 0.58 0.33 0.23 0.8 0.4 0.41 0.43 0.35 0.42
AMTR_s00042p00019010 (evm_27.TU.AmTr_v1.0_scaffold00042.2)
0.43 0.6 0.91 0.05 0.09 0.01 0.0 0.0 0.03 0.02 1.0 0.72 0.91 0.62 0.51 0.41 0.92 0.37 0.34 0.61 0.39 0.59
AMTR_s00044p00141950 (evm_27.TU.AmTr_v1.0_scaffold00044.138)
0.39 0.31 0.6 0.19 0.31 0.01 0.17 0.11 0.12 0.14 1.0 0.58 0.53 0.34 0.25 0.46 0.52 0.47 0.47 0.5 0.17 0.38
AMTR_s00048p00165750 (evm_27.TU.AmTr_v1.0_scaffold00048.120)
1.0 0.12 0.5 0.14 0.35 0.15 0.44 0.07 0.29 0.28 0.86 0.81 0.64 0.55 0.42 0.68 0.87 0.56 0.52 0.68 0.49 0.45
AMTR_s00053p00084490 (evm_27.TU.AmTr_v1.0_scaffold00053.42)
1.0 0.82 0.85 0.26 0.47 0.1 0.05 0.0 0.02 0.03 0.77 0.64 0.52 0.24 0.63 0.43 0.89 0.49 0.4 0.47 0.21 0.69
AMTR_s00056p00165600 (evm_27.TU.AmTr_v1.0_scaffold00056.145)
0.69 0.54 0.41 0.11 0.28 0.13 0.15 0.04 0.2 0.19 1.0 0.88 0.5 0.53 0.48 0.48 0.77 0.61 0.67 0.64 0.51 0.35
AMTR_s00060p00051530 (evm_27.TU.AmTr_v1.0_scaffold00060.13)
0.75 0.42 0.33 0.08 0.11 0.0 0.19 0.11 0.26 0.24 1.0 0.79 0.99 0.7 0.35 0.51 0.96 0.71 0.6 0.44 0.6 0.66
AMTR_s00060p00054700 (evm_27.TU.AmTr_v1.0_scaffold00060.14)
1.0 0.95 0.61 0.13 0.18 0.08 0.13 0.0 0.1 0.11 0.76 0.65 0.63 0.34 0.38 0.45 0.68 0.51 0.5 0.53 0.21 0.49
AMTR_s00060p00199420 (evm_27.TU.AmTr_v1.0_scaffold00060.143)
0.74 0.34 0.91 0.02 0.6 0.01 0.16 0.22 0.32 0.31 0.64 0.46 0.7 0.6 0.64 0.54 1.0 0.53 0.41 0.51 0.53 0.64
AMTR_s00066p00181890 (evm_27.TU.AmTr_v1.0_scaffold00066.226)
0.7 0.46 0.0 0.16 0.25 0.0 0.0 0.0 0.0 0.0 0.99 0.85 0.47 0.38 0.25 0.58 0.83 0.86 1.0 0.37 0.59 0.63
AMTR_s00066p00197320 (evm_27.TU.AmTr_v1.0_scaffold00066.259)
1.0 0.4 0.05 0.01 0.33 0.01 0.18 0.1 0.18 0.18 0.77 0.58 0.97 0.55 0.26 0.52 0.83 0.45 0.52 0.51 0.35 0.79
AMTR_s00068p00169260 (evm_27.TU.AmTr_v1.0_scaffold00068.123)
1.0 0.03 0.6 0.06 0.16 0.01 0.01 0.0 0.07 0.03 0.51 0.53 0.7 0.6 0.3 0.46 0.77 0.67 0.6 0.53 0.33 0.46
AMTR_s00068p00203870 (evm_27.TU.AmTr_v1.0_scaffold00068.178)
0.72 0.0 0.26 0.01 0.21 0.19 0.1 0.0 0.16 0.11 0.87 0.88 0.78 0.48 0.27 0.57 0.89 0.89 1.0 0.46 0.49 0.63
AMTR_s00069p00188190 (evm_27.TU.AmTr_v1.0_scaffold00069.189)
0.8 0.94 0.0 0.01 0.11 0.02 0.09 0.0 0.12 0.1 1.0 0.92 0.67 0.7 0.17 0.77 0.88 0.81 0.68 0.53 0.7 0.73
AMTR_s00071p00096930 (evm_27.TU.AmTr_v1.0_scaffold00071.72)
0.66 0.03 0.0 0.08 0.15 0.0 0.01 0.0 0.0 0.0 0.92 0.7 0.75 0.28 0.22 0.34 1.0 0.66 0.98 0.69 0.41 0.49
AMTR_s00077p00181870 (evm_27.TU.AmTr_v1.0_scaffold00077.206)
1.0 0.46 0.36 0.11 0.17 0.01 0.11 0.02 0.14 0.12 0.81 0.66 0.69 0.53 0.41 0.51 0.78 0.45 0.63 0.6 0.26 0.53
AMTR_s00095p00110450 (evm_27.TU.AmTr_v1.0_scaffold00095.67)
0.95 0.35 0.37 0.19 0.35 0.0 0.02 0.0 0.03 0.03 1.0 0.82 0.73 0.53 0.22 0.55 0.79 0.76 0.62 0.47 0.42 0.51
AMTR_s00096p00135790 (evm_27.TU.AmTr_v1.0_scaffold00096.86)
0.75 0.0 0.21 0.02 0.24 0.0 0.03 0.03 0.03 0.04 1.0 0.73 0.57 0.42 0.23 0.43 0.81 0.8 0.66 0.4 0.39 0.49
AMTR_s00106p00026610 (evm_27.TU.AmTr_v1.0_scaffold00106.8)
0.95 0.34 0.32 0.36 0.39 0.08 0.15 0.07 0.25 0.21 1.0 0.85 0.76 0.78 0.45 0.62 0.9 0.7 0.66 0.62 0.75 0.39
AMTR_s00111p00111440 (evm_27.TU.AmTr_v1.0_scaffold00111.85)
0.79 0.64 0.45 0.12 0.18 0.0 0.09 0.0 0.1 0.11 0.73 0.73 0.62 0.5 0.34 0.82 1.0 0.8 0.51 0.62 0.36 0.59
AMTR_s00119p00108550 (evm_27.TU.AmTr_v1.0_scaffold00119.84)
0.92 0.0 0.47 0.01 0.28 0.0 0.02 0.0 0.05 0.05 1.0 0.79 0.8 0.63 0.44 0.7 0.78 0.61 0.77 0.43 0.41 0.58
AMTR_s00119p00129000 (evm_27.TU.AmTr_v1.0_scaffold00119.102)
0.63 0.35 0.41 0.17 0.22 0.0 0.02 0.0 0.03 0.03 1.0 0.73 0.4 0.27 0.21 0.55 0.74 0.51 0.52 0.37 0.3 0.34
AMTR_s00138p00017550 (evm_27.TU.AmTr_v1.0_scaffold00138.3)
0.63 1.0 0.96 0.04 0.21 0.01 0.05 0.07 0.09 0.09 0.9 0.86 0.63 0.52 0.24 0.35 0.67 0.84 0.76 0.44 0.45 0.51
AMTR_s00148p00070260 (evm_27.TU.AmTr_v1.0_scaffold00148.44)
0.88 0.51 1.0 0.13 0.38 0.01 0.06 0.0 0.1 0.11 0.98 0.84 0.73 0.42 0.5 0.73 0.98 0.67 0.72 0.61 0.58 0.58
AMTR_s00168p00030500 (evm_27.TU.AmTr_v1.0_scaffold00168.8)
0.68 0.8 1.0 0.06 0.53 0.13 0.4 0.19 0.38 0.38 0.75 0.69 0.7 0.53 0.55 0.49 0.78 0.54 0.51 0.68 0.37 0.61
AMTR_s00171p00062290 (evm_27.TU.AmTr_v1.0_scaffold00171.46)
0.56 0.0 0.66 0.13 0.25 0.0 0.04 0.01 0.04 0.04 1.0 0.61 0.39 0.34 0.26 0.42 0.47 0.48 0.5 0.36 0.33 0.23
AMTR_s00177p00032620 (evm_27.TU.AmTr_v1.0_scaffold00177.11)
0.61 0.31 0.46 0.1 0.31 0.0 0.03 0.03 0.08 0.08 0.96 1.0 0.71 0.39 0.48 0.66 0.82 0.66 0.51 0.45 0.41 0.52
AMTR_s00185p00050380 (evm_27.TU.AmTr_v1.0_scaffold00185.20)
1.0 0.96 0.02 0.05 0.42 0.01 0.13 0.0 0.19 0.23 0.95 0.9 0.7 0.42 0.57 0.25 0.95 0.72 0.7 0.54 0.52 0.63

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)