Heatmap: Cluster_379 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc03g114080.2.1 (Solyc03g114080.2)
1.38 -3.12 3.44 1.57 -0.85 0.03 -2.12 -1.91 0.15 0.98 -5.28 -7.01 - - -3.36 -2.27 -1.72 1.87 1.5 -3.18 -3.72 -1.56 -2.13 -1.7 -2.22 -1.43 -5.54 -5.4 -3.01 -4.37 -3.97 -7.07 -2.24 1.63
Solyc06g060600.2.1 (Solyc06g060600.2)
0.12 -2.07 0.96 3.3 -6.75 -4.77 - - -0.66 0.57 -7.0 -9.1 -5.74 -8.08 -0.54 1.52 1.36 2.92 2.02 - - - -8.3 -10.94 -10.71 - -6.5 -6.63 -6.61 - - -8.72 - -0.21

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.