Heatmap: Cluster_69 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g017600.3.1 (Solyc01g017600.3)
-2.74 - -7.84 - -8.33 1.17 -9.34 0.19 1.22 0.61 2.89 2.2 -2.13 -2.86 -2.64 -2.35 -2.23 -11.04 - -4.99 -6.32 -0.48 0.92 0.76 -3.43 -4.54 -3.3 -2.38 -3.17 -0.87 0.55 -1.92 2.63 -1.61
Solyc01g080260.3.1 (Solyc01g080260.3)
0.53 -1.56 -1.49 0.42 1.28 0.92 - 0.15 0.97 1.7 -0.93 -2.04 -2.77 -2.77 -3.99 -7.7 -7.2 - - -1.5 3.15 -1.18 -1.53 -1.24 -2.21 1.27 -0.72 -0.32 -0.03 -0.4 -0.8 -1.51 -2.14 0.49
Solyc01g099180.3.1 (Solyc01g099180.3)
-3.91 - - - - 1.29 - 0.63 1.17 0.35 1.62 1.53 -3.03 -6.28 -4.71 - -5.23 -3.92 - 3.3 -0.53 -1.19 0.88 0.87 -2.8 -6.12 -1.48 -0.71 -1.23 -1.73 0.37 -2.52 1.02 -2.44
Solyc01g105600.3.1 (Solyc01g105600.3)
-0.44 0.06 -1.55 -1.96 -0.86 0.95 - -1.67 2.05 1.97 -0.44 -0.21 -0.45 1.18 -0.44 -3.9 -2.06 -7.15 -8.35 -2.15 0.35 -2.43 -1.14 -1.48 -2.3 2.33 1.02 0.63 1.01 -1.16 -0.92 -2.25 -1.27 -2.43
Solyc01g108390.3.1 (Solyc01g108390.3)
-1.67 -3.47 -3.08 -3.59 -2.04 1.82 -2.0 2.67 1.4 0.74 -1.14 -1.96 -4.35 -3.88 0.67 -1.54 -0.88 -7.82 - -6.7 -3.65 0.62 -0.76 -0.46 -0.3 -6.11 -0.73 -0.55 -0.82 0.91 0.71 0.96 1.83 -0.38
Solyc01g109230.3.1 (Solyc01g109230.3)
1.61 -6.54 -1.79 -5.51 1.1 1.1 -6.11 0.2 0.7 1.54 -0.04 0.62 -4.94 -4.66 0.2 0.32 -0.09 - - -2.95 -1.24 -0.38 -0.82 -0.22 -1.14 0.93 0.07 0.02 -0.1 0.07 -0.23 0.19 0.34 1.22
Solyc01g109330.3.1 (Solyc01g109330.3)
-1.31 -3.12 0.45 -0.2 -1.14 -0.58 - -1.18 1.58 2.09 -2.01 -2.05 -3.3 0.15 -0.74 -2.09 -1.57 -8.85 - -1.42 1.98 -1.68 -1.26 -1.32 -1.75 1.72 1.47 1.35 1.37 -0.22 -0.59 -1.44 -2.71 -0.81
Solyc02g077550.3.1 (Solyc02g077550.3)
-0.36 1.48 0.25 1.14 -1.84 0.05 - -1.85 0.79 1.5 -1.88 -1.36 -1.15 -0.18 -2.26 -2.67 -5.6 - - -3.42 -1.18 -1.11 -0.01 -0.69 -1.99 1.06 1.81 1.56 1.78 -1.08 -0.19 -1.36 -0.68 0.41
Solyc02g084410.3.1 (Solyc02g084410.3)
-2.87 - - - -5.9 1.57 -7.09 -0.68 1.97 0.6 1.91 2.0 -1.67 -1.93 -3.32 -2.81 -3.15 - - -2.6 -4.33 -0.65 1.31 0.85 -1.26 -9.53 -1.35 -1.5 -1.74 -2.4 -0.69 -4.26 3.03 -0.9
Solyc02g085400.3.1 (Solyc02g085400.3)
-3.49 -5.47 -1.33 -3.33 -6.56 0.9 -5.03 0.54 2.19 1.28 1.98 1.28 -1.94 -2.33 -3.04 -4.64 -3.54 - - -1.1 -1.77 -0.19 1.78 1.1 -3.19 -7.14 -3.15 -2.58 -2.83 -1.52 0.31 -2.88 2.63 -1.67
Solyc03g005280.3.1 (Solyc03g005280.3)
-4.09 - - -6.57 -5.47 1.66 -5.73 0.95 1.71 1.3 1.58 1.45 -2.42 -3.64 -3.73 -3.61 -3.11 - -7.58 -0.58 2.26 -2.38 0.63 0.83 -4.04 -2.05 -4.15 -2.92 -2.73 -3.6 -0.25 -3.15 2.52 -1.25
Solyc03g006140.3.1 (Solyc03g006140.3)
0.27 -2.86 0.1 -1.01 -0.02 0.21 0.44 -0.42 0.07 0.04 0.04 -0.38 0.16 -0.1 -0.63 -0.88 -0.88 -9.59 -11.59 -0.47 0.36 0.04 0.09 0.11 -0.2 1.1 0.43 0.46 0.56 0.09 0.19 0.17 1.1 0.4
Solyc03g006710.1.1 (Solyc03g006710.1)
-2.47 - 2.04 0.58 -4.87 1.69 - 0.78 0.95 -0.04 0.49 0.17 0.92 2.28 -3.91 -2.91 -3.13 - -6.0 -6.44 -5.48 -0.66 -0.18 -0.34 -4.23 - -5.12 -2.51 -2.21 -0.77 0.03 -2.04 2.43 -0.64
Solyc03g033250.1.1 (Solyc03g033250.1)
0.82 -1.89 - - -0.01 1.99 -4.59 0.91 -1.8 1.38 0.67 1.65 -2.43 -0.45 - - - - - - -2.86 -3.27 - -2.76 -3.5 -0.68 - - -3.84 -1.05 -0.75 -2.34 2.91 2.72
Solyc03g033280.1.1 (Solyc03g033280.1)
1.73 0.51 -3.94 -1.45 -0.6 1.42 -5.83 -1.22 0.57 1.43 1.9 1.7 -1.27 -1.33 -0.46 -4.44 -6.15 - - -5.99 -1.55 -1.5 -1.14 -0.69 -1.74 -3.48 -1.88 -1.99 -2.67 -0.58 -0.44 -0.42 1.55 2.11
Solyc03g113210.3.1 (Solyc03g113210.3)
-4.32 - -4.71 -5.08 -7.01 1.24 -8.45 0.42 1.3 -0.37 1.36 0.53 -2.91 -3.66 -3.99 -4.17 -3.93 -6.99 -3.42 -5.78 -6.22 0.86 1.98 1.25 -1.35 - -3.1 -1.89 -2.02 -0.13 1.23 -1.53 3.24 -2.31
Solyc03g117250.3.1 (Solyc03g117250.3)
-2.91 -7.98 - - -4.47 1.43 -5.89 0.4 1.05 -0.39 2.24 1.81 -1.73 -3.06 -4.67 -6.98 -4.94 -7.46 -7.77 -6.15 -6.32 0.66 2.39 1.65 -1.89 - -1.69 -1.74 -2.05 -0.06 1.09 -1.71 1.69 -0.98
Solyc04g076660.3.1 (Solyc04g076660.3)
0.71 - -0.5 -5.34 -0.59 -0.24 -3.29 -1.37 2.26 -0.03 -0.95 -2.43 -2.08 -3.03 -2.51 -2.45 -2.14 - -6.02 -0.81 2.57 0.08 -0.21 0.57 0.12 2.15 -1.11 -0.43 -0.77 -0.25 0.06 -0.15 -3.18 1.08
Solyc04g082240.1.1 (Solyc04g082240.1)
1.15 -2.94 0.95 3.12 - 1.01 - -0.67 0.54 -3.01 0.25 -0.09 -1.62 - - - -4.02 - - -4.52 - -1.16 0.94 0.22 -2.43 - -3.24 -3.35 -3.35 -2.4 0.42 - 2.78 0.85
Solyc05g014550.1.1 (Solyc05g014550.1)
0.9 - -2.56 -5.33 0.23 1.72 - -0.62 0.49 0.28 1.42 0.83 -2.8 -5.19 -0.95 -2.59 -1.81 -1.95 - -0.54 0.9 -1.01 0.38 -0.02 -1.99 1.21 -1.86 0.44 1.55 -0.86 -0.27 -1.61 1.78 -0.47
Solyc05g017970.1.1 (Solyc05g017970.1)
-1.27 -0.44 -3.63 -2.66 0.02 1.96 -1.31 1.77 -1.41 -0.39 -1.11 -1.51 -2.15 -2.92 -3.25 -4.0 -3.23 - - -4.78 -2.72 0.46 -2.35 -0.37 0.02 -3.28 -1.69 -0.55 -1.02 0.53 0.24 0.17 3.63 -5.43
Solyc05g041150.1.1 (Solyc05g041150.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc06g006110.3.1 (Solyc06g006110.3)
-4.52 - - - - 1.79 -10.56 1.68 1.12 1.58 1.82 1.28 -1.54 -3.71 -3.02 -4.35 -2.98 - - -7.24 -0.0 -1.05 0.39 0.67 -4.4 -1.48 -3.01 -2.64 -3.3 -1.43 0.48 -2.97 2.95 -0.69
Solyc06g008360.3.1 (Solyc06g008360.3)
0.43 -1.4 -2.33 -0.83 -0.61 0.29 -8.96 -1.44 0.32 0.23 1.26 1.07 -3.32 -1.34 0.58 0.71 0.76 - - -2.14 -1.04 -0.64 0.47 -0.15 -0.81 1.27 0.33 0.74 1.02 -0.48 -0.1 -0.67 -0.44 1.28
Solyc06g009150.1.1 (Solyc06g009150.1)
-1.16 -4.69 -1.52 -1.28 -1.74 1.45 -5.14 -0.35 0.03 -0.11 0.89 0.99 -1.81 -3.16 -3.14 - -3.79 - - -2.39 -4.39 -1.72 0.82 0.89 -1.93 -2.46 -2.29 -2.64 -0.91 -2.87 -0.95 -1.23 3.91 -0.15
Solyc06g068040.3.1 (Solyc06g068040.3)
-0.51 - - - -4.27 2.07 -8.53 2.16 0.48 1.18 1.55 1.46 -1.86 -2.4 -4.97 -4.66 -4.35 -7.64 - -6.13 - -0.15 0.81 1.22 -3.09 - -4.4 -2.3 -2.5 -0.31 0.58 -1.86 2.47 -0.02
Solyc06g072350.3.1 (Solyc06g072350.3)
-3.66 - -6.5 -7.75 -2.8 1.75 -7.96 1.38 0.87 0.45 1.86 1.99 -2.0 -3.11 -2.95 -3.32 -2.97 - - -4.98 -12.58 -0.57 0.65 0.64 -3.87 - -2.97 -2.36 -3.21 -0.77 0.69 -2.55 3.19 -1.18
Solyc06g072530.3.1 (Solyc06g072530.3)
-0.15 -5.2 3.06 1.67 -3.38 -5.72 -6.77 -5.88 0.65 -0.09 -1.94 -3.97 -7.77 -4.27 1.89 1.29 1.73 -4.2 -4.05 -0.43 1.34 -4.3 -3.86 -3.7 -4.04 1.41 -0.55 -1.17 -1.76 -2.6 -3.05 -4.64 -5.39 0.01
Solyc07g043240.3.1 (Solyc07g043240.3)
1.77 - -1.2 - 0.83 2.14 -7.32 1.91 1.79 1.0 -0.16 -0.65 -4.44 -5.3 -2.53 -4.42 -7.65 - -8.42 -4.2 0.76 -0.81 -0.46 -0.68 -2.08 1.45 -1.79 -1.79 -2.98 -0.66 -0.14 -1.05 0.73 0.95
Solyc07g063690.1.1 (Solyc07g063690.1)
-4.59 - - - -5.29 2.59 - 0.5 0.97 0.2 1.23 0.6 -2.63 -2.55 -4.16 -5.83 -4.61 - -6.53 -9.71 - 1.51 1.75 1.95 0.36 -6.2 -3.32 -2.41 -1.85 -1.02 0.92 -2.43 2.07 -1.49
Solyc08g077400.2.1 (Solyc08g077400.2)
-2.76 -1.51 -1.22 -4.0 -2.64 0.68 -0.81 1.18 0.61 0.77 2.01 1.12 0.06 0.78 -1.31 -2.55 -1.93 - -4.52 -1.48 0.3 0.18 -0.03 0.51 -1.54 -4.61 -2.26 -1.36 -1.54 -0.86 0.64 -2.16 2.66 -1.98
Solyc08g079200.1.1 (Solyc08g079200.1)
-0.56 -6.34 2.47 3.74 -7.6 -0.24 -9.74 -0.4 -0.2 -1.03 0.62 0.19 -5.61 -7.36 -8.89 -9.36 -7.85 - - -10.88 -10.59 -3.13 -0.9 -0.88 -6.63 - -3.26 -3.87 -4.35 -3.46 -1.22 -6.96 2.68 -1.43
Solyc08g079860.2.1 (Solyc08g079860.2)
-0.3 - - - -4.57 0.9 - 0.9 -1.16 -0.65 -0.11 0.14 -3.68 -3.27 - - - - - -4.03 - -3.59 0.41 -0.05 -4.07 - -3.51 -3.33 -4.04 -3.42 -0.27 -4.31 4.45 -0.73
Solyc08g079880.2.1 (Solyc08g079880.2)
-3.65 - - - -3.85 2.41 - 0.68 1.42 1.03 0.61 2.15 -4.73 -7.28 - - - - - -6.19 -4.75 -3.85 1.3 0.71 -6.11 -2.21 -2.59 -2.79 -2.96 -3.9 -2.41 -6.55 3.45 -3.28
Solyc08g079890.2.1 (Solyc08g079890.2)
-1.47 -6.04 -6.39 -5.91 -1.99 1.47 - -0.58 0.58 0.43 0.51 1.63 -2.69 -1.95 -4.84 - -8.54 - - -2.41 1.3 -2.39 0.69 0.25 -3.27 2.7 -1.3 0.34 1.53 -1.37 -1.85 -2.75 2.04 -1.7
Solyc08g081620.3.1 (Solyc08g081620.3)
-4.51 - - - -10.43 0.9 - -1.59 0.45 -0.0 -0.73 -1.33 -1.4 2.64 -2.42 - -6.25 - - 0.95 1.68 -2.75 -0.72 -0.74 -5.33 3.58 -0.49 -1.42 -5.34 -2.91 0.23 -4.49 -1.13 -2.31
Solyc09g009600.2.1 (Solyc09g009600.2)
0.67 2.84 3.04 2.26 -0.04 -1.06 - -0.37 -0.33 -1.73 -4.62 - -3.21 -4.32 -4.2 - -6.49 - - -1.84 1.65 -4.21 -5.27 -5.67 -7.28 1.77 - -3.7 -3.09 -4.88 -3.56 -5.71 - 0.43
Solyc09g025310.3.1 (Solyc09g025310.3)
0.53 - -3.86 -6.71 -0.06 -0.04 -5.24 -2.41 0.46 0.94 -0.93 0.25 1.71 3.29 -4.13 -4.52 -5.46 -6.68 - -3.17 1.28 -4.23 -2.65 -2.75 -3.66 1.19 -0.06 -0.57 -0.91 -1.53 -1.33 -3.5 -1.21 1.78
Solyc09g072690.1.1 (Solyc09g072690.1)
-4.54 - - - -8.08 1.24 -7.64 0.33 0.87 0.68 2.03 1.25 -2.09 -5.17 -3.49 -3.98 -3.17 - - -7.06 - 1.06 2.03 1.28 -2.16 - -2.73 -1.97 -1.95 -0.13 1.38 -1.25 2.59 -1.18
Solyc09g082760.3.1 (Solyc09g082760.3)
-3.49 - - - -6.98 0.64 -8.23 0.19 -0.12 -0.05 1.65 1.59 -2.52 -4.66 -4.75 -5.68 -4.82 - - -6.45 - 1.29 2.24 1.73 -0.72 - -2.07 -1.24 -1.16 0.43 1.5 -1.53 2.51 -1.34
Solyc10g005670.2.1 (Solyc10g005670.2)
-1.25 -3.22 -0.34 -0.81 0.34 0.75 -1.19 0.35 0.04 0.01 -0.16 -0.32 -0.99 -1.43 -0.78 -0.74 -0.61 -1.93 -0.84 0.01 -0.77 0.81 0.83 0.84 0.57 -0.39 0.34 0.42 0.33 0.65 0.87 0.35 0.58 0.01
Solyc10g018750.2.1 (Solyc10g018750.2)
-2.16 - 1.41 -2.29 - -0.12 - 1.24 1.18 -0.12 -1.68 -3.68 -2.42 2.59 0.76 0.97 0.29 - - -1.64 1.92 - -2.35 -3.56 - 1.47 1.06 0.17 -2.42 - -1.51 - -0.49 0.45
Solyc10g052795.1.1 (Solyc10g052795.1)
- - - - - - - - - - - - - - - - - - 4.48 - - - - - - - - - 3.55 - - - - -
Solyc10g081300.1.1 (Solyc10g081300.1)
0.77 -4.23 0.14 -0.45 0.02 0.62 - -1.01 0.92 0.61 -1.06 -1.6 -3.82 -0.04 -2.76 -4.53 -4.8 - - -2.33 0.23 -1.32 -0.21 -0.4 -1.5 1.64 1.24 1.12 1.53 0.08 -0.39 -0.74 1.22 1.5
Solyc11g044367.1.1 (Solyc11g044367.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc12g005300.2.1 (Solyc12g005300.2)
-0.89 -3.8 -4.48 -9.23 -3.46 1.7 -5.17 0.96 2.07 1.14 2.21 2.07 -1.21 -2.26 -2.36 -3.38 -3.57 - - -4.37 - -2.64 0.89 0.8 -5.39 -0.84 -3.27 -3.5 -4.67 -3.74 -0.28 -6.4 2.36 0.19
Solyc12g094400.2.1 (Solyc12g094400.2)
-1.92 - -4.22 - -0.68 1.73 - -0.33 0.84 -0.34 0.93 -0.06 -5.83 - -3.21 - - - - -3.95 2.64 -1.12 -1.03 -0.59 -2.67 3.35 -5.45 -2.83 -1.09 -2.0 -0.98 -1.65 1.48 -0.64

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.