Heatmap: Cluster_564 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc06g064850.2.1 (Solyc06g064850.2)
- - - - -4.65 -7.47 -1.92 - 1.45 -2.23 -5.81 - 0.11 0.47 -4.93 - -4.72 -0.89 -2.17 -4.76 -0.11 1.77 -1.07 0.7 2.12 - 0.4 1.52 1.27 1.5 1.2 2.3 - -
Solyc12g009800.2.1 (Solyc12g009800.2)
-2.5 -9.17 -0.35 -0.52 2.33 -1.03 -9.25 -0.33 -0.21 0.98 -5.35 -6.15 -2.9 -5.03 -2.47 -4.55 -2.83 -4.62 -5.82 -7.36 -2.45 1.15 -0.86 1.29 1.72 -7.19 1.39 1.21 0.39 1.42 1.11 1.17 -2.94 -1.29

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.