Heatmap: Cluster_590 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc02g080790.3.1 (Solyc02g080790.3)
-0.15 -3.93 4.32 -0.54 -6.99 -11.43 -6.66 - -4.15 -5.33 -1.69 -2.07 - -7.64 -3.65 -5.01 -5.01 -10.09 -9.96 - - -1.99 1.57 0.99 0.27 - 1.31 0.33 -1.58 -1.51 -1.99 -5.88 - -0.99
Solyc03g116370.3.1 (Solyc03g116370.3)
-2.12 -1.2 3.87 0.16 -1.9 -2.74 -0.22 -1.06 -0.26 -1.58 -0.27 -1.19 -2.4 -2.44 -0.02 -1.23 -0.72 -0.26 -2.7 -8.96 -3.56 -2.13 1.35 0.69 0.1 - 0.97 0.18 -0.9 -2.05 -1.85 -3.39 -5.44 -2.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.