Heatmap: Cluster_526 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc03g025250.3.1 (Solyc03g025250.3)
-3.98 -6.39 - -6.35 - -1.21 0.64 -4.33 1.75 2.55 - -5.94 -4.59 - -2.39 -3.62 -1.91 3.23 3.54 - - -4.14 -4.59 -3.6 -4.4 - -4.35 -3.83 -2.17 -2.78 -4.1 -4.08 - -2.52
Solyc03g025255.1.1 (Solyc03g025255.1)
-4.18 - -5.72 - -5.38 -0.94 0.5 -3.48 0.89 2.18 -6.65 -4.08 -3.64 -6.22 -1.76 -2.07 -1.2 3.52 3.59 - - -3.6 -4.74 -4.4 -6.6 -3.69 -4.89 -3.89 -2.54 -4.57 -3.21 -3.25 -5.94 -3.83

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.