Heatmap: Cluster_200 (HCCA cluster)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc00g006480.1.1 (Solyc00g006480.1)
3.15 - - 2.49 - - - - - - - - - - - - 3.08 2.53 2.41 - - - - - - - - - - - - - - -
Solyc00g006550.1.1 (Solyc00g006550.1)
5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc00g006560.1.1 (Solyc00g006560.1)
- - - 4.45 - -2.37 - - - - - - - - 3.27 - 1.22 - - - - - - - - - - - - - - - - -
Solyc01g005895.1.1 (Solyc01g005895.1)
1.13 - - - 0.19 -1.15 1.4 -2.39 -0.92 1.91 1.32 0.94 1.81 -0.34 0.12 0.31 -0.17 -3.75 -2.73 -2.21 -1.75 -4.62 -2.59 -2.68 -2.56 -0.84 -2.18 -2.64 -2.16 - -2.33 -2.48 -3.08 3.05
Solyc01g065700.3.1 (Solyc01g065700.3)
0.86 -3.97 1.48 0.2 3.23 -0.98 -12.5 -1.62 -6.52 -4.8 -9.2 -9.81 -5.82 -9.72 -6.1 -5.44 -6.47 - - -12.69 -9.96 -7.97 -7.71 -5.43 -6.24 -8.45 -5.87 -5.02 -6.8 -7.44 -8.21 -6.53 -4.16 4.14
Solyc01g079910.1.1 (Solyc01g079910.1)
2.84 4.3 - -1.11 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.73
Solyc01g094910.3.1 (Solyc01g094910.3)
-6.84 - -8.93 - -5.12 0.56 -10.15 -2.33 1.15 1.63 -8.44 -9.94 -6.8 -10.27 2.65 3.7 2.62 -9.26 - -6.51 -0.42 - - -9.03 -9.92 -3.67 -7.95 -9.14 -7.11 - - -7.04 -1.97 -1.25
Solyc01g097570.2.1 (Solyc01g097570.2)
1.85 -3.71 0.71 -3.13 -2.74 1.57 -1.89 0.84 0.05 0.15 -0.84 -0.04 -3.36 0.55 -1.48 -1.02 -1.55 - - -2.6 -2.55 -3.01 -2.54 -3.27 -3.95 1.12 -3.66 -4.76 -3.44 -6.99 -4.1 -4.44 0.4 3.63
Solyc01g104550.3.1 (Solyc01g104550.3)
2.86 2.63 1.4 2.32 0.67 1.74 -5.18 -1.76 1.74 0.47 - - - -4.94 -3.13 -1.33 -2.59 - - - -1.6 - - -7.13 -7.67 - - - -4.46 - - -6.64 -3.03 0.81
Solyc02g069200.3.1 (Solyc02g069200.3)
-1.24 - - - - -9.53 -6.8 - -2.74 0.37 -0.8 -4.73 1.89 4.32 -4.69 -5.19 -2.74 - - - - -7.46 -7.42 -3.43 -5.43 - -1.03 -2.42 -2.32 -2.57 -1.92 -3.43 - 2.6
Solyc02g080450.1.1 (Solyc02g080450.1)
0.63 -0.52 2.58 3.14 0.65 -0.8 -6.84 -1.53 0.48 0.5 -3.52 -1.91 - - -1.73 -3.44 -1.85 - - -9.6 -4.38 -1.86 -1.31 -1.42 -2.31 - -4.71 -3.17 -2.82 -4.48 -4.08 -3.82 -0.96 3.06
Solyc03g006720.1.1 (Solyc03g006720.1)
-0.1 - - - - - - 1.59 - - - - - - - - - - - - - - - - - - 0.29 - - - - - - 4.85
Solyc03g007290.3.1 (Solyc03g007290.3)
1.42 -1.74 1.81 1.25 -0.87 -0.52 2.19 -2.54 -1.43 -2.6 -5.18 -1.57 -3.22 -4.29 -2.08 -4.27 -3.29 -5.83 -4.64 -1.35 -0.33 -2.78 -3.73 -2.47 -1.92 -2.64 -1.4 -0.6 0.05 -1.55 -2.46 -1.33 -3.95 3.65
Solyc03g119810.1.1 (Solyc03g119810.1)
2.73 -7.13 2.1 -1.68 0.79 -0.8 -5.1 -3.28 -2.04 0.06 -0.4 0.44 -2.48 -2.82 -2.31 -1.05 -2.41 -7.4 -7.67 0.48 -0.12 -3.78 -5.05 -3.9 -3.38 -3.45 -4.12 -4.12 -3.46 -3.19 -3.69 -1.12 -1.53 3.56
Solyc04g014220.1.1 (Solyc04g014220.1)
-0.08 -3.26 1.61 0.48 0.52 -1.52 -0.16 -2.09 0.75 1.01 -0.59 -0.03 1.55 2.05 -1.42 -2.85 -1.5 -4.49 -4.85 -2.89 0.02 -0.74 -0.48 -0.42 -1.05 -2.14 0.16 -0.39 -0.23 -0.81 -0.84 -0.2 -3.18 1.79
Solyc04g014510.3.1 (Solyc04g014510.3)
1.99 -1.09 2.28 0.8 1.28 -2.25 -8.86 -1.75 -0.92 -1.02 -4.9 -6.15 -6.47 -7.67 2.04 2.26 2.56 -12.68 -11.98 -6.28 -4.76 -4.89 -9.77 -7.39 -6.93 -6.23 -9.1 -7.73 -6.35 -5.39 -5.03 -2.89 -3.04 1.88
Solyc04g016020.1.1 (Solyc04g016020.1)
4.04 2.76 - 1.52 - -1.7 - 1.65 -0.86 - - - -1.02 - - - - - - - - - - -3.23 - - - - - - - - - 1.72
Solyc04g016173.1.1 (Solyc04g016173.1)
4.24 - - - 0.97 0.7 - - - - - - - - - - - - - - - - - 1.28 0.42 - 2.31 - 1.48 - - - - -
Solyc04g056620.2.1 (Solyc04g056620.2)
4.32 3.14 - -2.65 - - - - - - - -3.78 - -3.79 - - - - - - - - - - - - - - - - - - - 2.31
Solyc05g006790.2.1 (Solyc05g006790.2)
4.44 - -2.57 - -2.92 -1.32 -3.18 - - - -3.54 -0.38 -3.75 -2.4 - -3.54 -4.87 - - -2.39 -3.65 -3.28 - -4.8 -3.44 - 0.87 0.17 -5.64 -1.97 -1.81 -4.08 - 2.63
Solyc05g055050.2.1 (Solyc05g055050.2)
-3.91 -2.84 -4.3 -1.3 - -2.01 -0.6 -3.23 2.83 1.05 -2.7 -4.68 -2.46 - 2.87 2.39 2.11 -2.5 - - -4.51 -1.33 -3.24 -1.64 -2.22 - -1.85 -0.22 -0.63 -0.37 -0.23 -0.6 -4.56 -0.97
Solyc05g055970.3.1 (Solyc05g055970.3)
0.47 -2.81 4.07 1.46 1.65 -0.05 -3.08 -0.52 -1.29 -1.47 -2.37 -2.21 -4.79 -4.69 -2.07 -1.97 -3.46 -0.06 -1.56 -4.72 -2.34 -2.27 -3.36 -2.23 -2.95 -2.43 -2.02 -2.89 -2.93 -1.39 -2.46 -1.18 -4.08 1.11
Solyc06g030590.2.1 (Solyc06g030590.2)
0.25 4.13 0.74 2.91 -1.86 -4.71 -3.24 - -0.84 -0.63 -0.42 -0.45 -1.53 -5.82 - - -5.79 - - -6.73 - - -0.25 -1.66 -2.62 -3.77 -5.56 -6.66 -5.56 - - - - 0.27
Solyc06g061080.3.1 (Solyc06g061080.3)
2.09 -3.09 -2.61 - 1.72 -0.63 0.69 -2.41 0.99 1.53 0.38 1.71 -4.0 -3.39 -2.99 -4.7 -2.36 - - 0.6 -0.47 -2.48 -1.41 -2.36 -2.49 1.87 -1.16 -1.62 -2.01 -1.91 -2.67 0.45 -2.81 1.99
Solyc06g066710.1.1 (Solyc06g066710.1)
2.21 -1.42 -1.2 -0.81 -0.16 -0.57 1.02 0.53 2.39 -0.84 -4.22 -3.07 -0.07 -3.05 -2.51 -3.49 -4.27 -2.93 - - - -3.98 - -3.26 -3.62 - -3.81 -4.54 -3.49 - -3.78 -4.81 0.66 3.74
Solyc06g067950.3.1 (Solyc06g067950.3)
1.05 0.36 1.47 -0.38 1.86 -0.26 -0.18 0.64 -0.35 0.06 -1.41 -2.57 -3.25 -4.0 -0.53 -1.47 -0.99 -9.34 -10.72 -1.48 -1.2 0.13 -0.11 -0.26 -0.16 -0.4 -1.14 -0.78 -0.47 0.19 0.11 0.91 -1.42 2.2
Solyc07g007240.3.1 (Solyc07g007240.3)
4.03 -6.01 -5.82 -8.69 -2.54 0.69 -8.66 -2.91 -2.64 0.65 -8.21 -6.47 -7.87 -8.79 2.98 -3.25 0.74 -8.45 -7.53 -7.76 -8.1 -9.27 -8.92 -7.45 -8.49 -10.67 -9.36 -9.02 -7.8 - -5.76 -7.51 -2.98 2.04
Solyc07g043200.2.1 (Solyc07g043200.2)
1.56 -2.04 -2.21 -1.73 - -7.57 - - -3.43 -3.62 - - - - 3.31 3.25 3.27 -5.62 -7.75 -2.46 - - - - - -0.95 - - -7.83 - - - - -1.5
Solyc07g045060.1.1 (Solyc07g045060.1)
4.25 -1.39 -0.25 1.4 - -4.58 - - - - - - - - - - - - - - - - - - - - - - - - - - -1.61 3.43
Solyc08g007540.3.1 (Solyc08g007540.3)
-1.1 -4.54 0.22 0.04 0.16 -0.19 -0.51 -3.4 -0.81 -1.31 -2.68 -2.89 -1.41 -2.43 2.22 3.27 2.9 -5.54 -7.52 -2.7 -1.77 -2.53 -2.3 -2.35 -2.8 -1.57 -1.8 -1.89 -1.95 -2.48 -2.25 -2.85 -3.98 1.0
Solyc08g067690.2.1 (Solyc08g067690.2)
4.08 - 0.17 - -2.61 2.42 - - - - - - 0.64 -1.65 -0.77 - - - - - - - -4.8 - - - - -4.17 - - - - -5.09 2.98
Solyc08g067700.1.1 (Solyc08g067700.1)
4.82 - 1.06 - - -3.04 - -2.49 - - - - -2.56 - - - - - - - - - - - - - - - - - - - - 1.7
Solyc08g075600.2.1 (Solyc08g075600.2)
-0.11 - - - 1.22 1.76 - 1.35 0.5 2.41 - - 4.02 0.93 - - - - - - - - - - - - - - - - - - - -
Solyc08g079950.1.1 (Solyc08g079950.1)
5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc08g079960.1.1 (Solyc08g079960.1)
4.27 - - - - - - - 3.87 - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc08g081090.1.1 (Solyc08g081090.1)
3.83 - 0.97 - -0.47 - - - 1.01 - - -0.25 3.74 -0.18 - - - - - - - - - - - - - - - - - - - -
Solyc09g014540.2.1 (Solyc09g014540.2)
3.86 - - - 3.84 0.24 - - 0.91 - - - - - - - - - - - - -3.29 - - - - - - - - - - - 0.95
Solyc09g090010.3.1 (Solyc09g090010.3)
4.68 1.39 - 0.37 -3.96 -9.83 - - - - - - -6.67 - - - - - - -7.37 - - - - - - - -8.96 -8.1 - - - - 2.13
Solyc10g005550.2.1 (Solyc10g005550.2)
1.14 -1.67 - - - -0.52 - - - -0.77 -2.77 0.02 - 0.97 - - 3.89 - - 0.52 0.94 - -2.22 -1.46 -3.4 - -2.17 - -3.26 - -0.7 -2.0 0.07 2.57
Solyc10g049280.2.1 (Solyc10g049280.2)
3.08 - 1.12 -3.51 -9.64 -7.62 -0.81 -6.92 -6.1 -1.27 -4.58 - -8.5 - 0.75 3.28 3.1 - - - - - - -10.62 - - -9.92 - -7.71 - - - - 1.18
Solyc10g074830.1.1 (Solyc10g074830.1)
0.01 -0.13 2.36 4.68 - - - - -1.65 - - - - -5.21 - - - - - - -4.22 - -5.1 -6.07 - - -5.4 -6.09 -5.52 - - - -4.72 -0.4
Solyc10g079660.2.1 (Solyc10g079660.2)
2.39 3.09 1.97 0.91 -1.51 -2.54 - - - -2.03 - - - - - - - - - - - - - - - -1.14 - - - - - - - 3.72
Solyc10g079680.2.1 (Solyc10g079680.2)
2.33 0.98 - -0.92 - 1.95 - - - - - - - - - - -0.51 - - - -1.91 - - - - - - - -3.02 - - - -0.21 4.37
Solyc10g080050.2.1 (Solyc10g080050.2)
2.81 -3.32 2.2 2.71 -1.8 -1.41 -1.16 -6.45 -3.69 -4.1 -3.02 -1.89 -1.33 -1.76 - -2.13 -2.99 - - -4.99 - -6.62 - -8.86 -6.46 - - -7.08 -5.93 -6.56 -4.27 -5.68 -8.17 3.69
Solyc10g081780.2.1 (Solyc10g081780.2)
3.97 1.1 1.67 1.16 -0.37 - - - - - - - - - - - - - - - -0.97 - - -2.9 -2.7 - - -2.3 - - - -2.18 - 3.14
Solyc11g018530.2.1 (Solyc11g018530.2)
2.34 -2.39 3.38 -0.85 -5.95 -5.96 - - - -6.39 - - -7.35 -7.26 - -4.67 -7.49 - - - - - - -7.76 - - - - - - - - - 4.14
Solyc11g045520.2.1 (Solyc11g045520.2)
1.68 - -1.67 - -0.6 1.51 -0.34 2.86 1.82 -0.88 -4.44 -5.68 - - - - - - - - - -1.64 -3.97 -3.31 -5.28 - - -7.34 -4.6 -4.32 -2.67 - -1.03 3.76
Solyc12g008440.1.1 (Solyc12g008440.1)
2.57 - -3.67 -3.77 - -5.02 - - 4.32 - - -4.89 - - -1.16 -2.64 -1.22 - - - - - - -6.33 -5.57 - - - -3.3 - - -4.96 - 2.73
Solyc12g011060.2.1 (Solyc12g011060.2)
-1.12 - -3.06 - 4.23 -2.82 - - -2.05 - -2.6 0.17 -2.06 -3.21 -2.42 - -2.76 -3.04 -1.1 -2.94 -3.27 -3.09 - -5.32 - - - -3.98 -3.16 - - - - 3.47
Solyc12g017340.1.1 (Solyc12g017340.1)
3.34 - - - - - - - - - - - - - - - - - - - -2.35 - - - - - - - - - - - - 4.57
Solyc12g017350.2.1 (Solyc12g017350.2)
2.85 - - - - - - - - - - - - - - - - - - -4.85 - - - -7.01 - - -3.23 -7.19 - - - - - 4.74
Solyc12g019140.2.1 (Solyc12g019140.2)
1.72 -1.02 -4.23 4.09 -0.49 0.76 - -1.98 1.34 -1.46 -5.51 - - - -1.7 -2.84 -0.83 - - - - - - - - - - - - -4.9 - - -3.7 2.68
Solyc12g056920.2.1 (Solyc12g056920.2)
0.93 -2.55 2.99 0.44 0.46 -2.7 0.25 -2.7 -1.56 -3.82 - - - - -9.33 - -9.67 - - -4.28 -3.18 0.04 -2.75 -1.17 -1.51 - -0.72 0.28 0.37 0.5 -0.03 0.97 -4.85 3.28
Solyc12g088970.1.1 (Solyc12g088970.1)
0.32 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.03
Solyc12g100300.2.1 (Solyc12g100300.2)
1.24 - 2.27 0.15 - -5.36 -4.79 - 2.54 -4.48 - - -3.8 -2.84 -3.62 - 3.74 -5.34 -5.06 - - - - - - - - -6.63 -4.47 - - - -5.88 2.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.