Heatmap: Cluster_267 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g008870.2.1 (Solyc01g008870.2)
1.53 - - - - 1.25 - - - - - - - -2.2 - - - - - - - -2.22 - -2.83 - 3.92 -0.35 -0.95 1.69 - - 0.03 - 2.89
Solyc01g095720.3.1 (Solyc01g095720.3)
-0.43 -1.19 -0.45 2.24 -0.82 -0.64 0.41 -3.28 1.15 1.05 -2.55 -3.68 1.02 -0.87 2.29 1.61 1.64 - - -2.68 -0.91 -3.5 -5.38 -0.56 -0.12 1.17 -3.39 -2.83 -1.17 -3.92 -4.08 -2.74 -3.04 -0.3
Solyc01g097470.3.1 (Solyc01g097470.3)
3.57 -4.05 -3.36 -4.05 -1.14 0.07 -3.65 -0.03 0.15 -0.59 -4.39 -3.1 -3.29 -4.26 -3.71 -4.97 -2.94 -8.01 - -0.23 2.39 -4.47 -7.18 -1.73 -0.33 1.22 -5.23 -4.72 -3.79 -4.52 -5.27 -4.49 -2.08 2.8
Solyc01g099160.3.1 (Solyc01g099160.3)
2.7 -6.92 -0.17 -3.4 -0.46 -1.54 -1.1 -4.02 0.35 1.85 -1.11 -1.43 -1.05 -1.95 1.86 1.82 0.99 -9.33 -11.5 1.89 -2.04 -2.15 -1.87 -1.33 -1.88 1.06 -4.15 -3.86 -3.43 -4.1 -3.36 -2.19 -2.45 0.41
Solyc01g106340.3.1 (Solyc01g106340.3)
0.46 -1.78 -0.46 -0.48 -0.66 -2.53 0.09 -2.33 -0.55 -1.54 -1.31 -2.06 -1.16 -1.19 -0.98 -1.55 -1.29 -8.05 -8.72 -1.55 2.03 -0.23 0.54 1.63 2.23 2.07 0.58 0.35 0.02 -0.58 -0.41 -1.61 -3.79 -0.52
Solyc01g109180.3.1 (Solyc01g109180.3)
-4.94 - -2.89 -6.31 0.15 0.08 1.03 0.5 1.35 -0.08 -0.9 -0.91 -5.14 -3.48 2.29 0.76 1.08 - - -1.86 0.95 -0.37 -0.28 1.45 1.74 -0.06 -0.14 -0.49 -0.37 -2.39 -1.07 -4.09 -0.34 -3.37
Solyc02g071920.3.1 (Solyc02g071920.3)
0.55 0.15 0.84 0.71 -1.42 -0.06 -0.91 -0.97 -0.89 -1.12 -1.77 -0.75 -1.56 -0.55 2.14 1.55 1.97 -5.22 -7.23 -1.65 1.52 -1.51 -1.43 0.0 0.07 -0.45 -0.23 -0.29 -0.15 -2.25 -1.78 -3.1 -1.68 0.31
Solyc02g089150.3.1 (Solyc02g089150.3)
-1.95 -7.36 -3.29 -4.03 -4.86 -1.83 -5.73 -1.51 -1.18 -0.92 -2.93 -2.48 -0.39 0.03 0.37 -0.53 -0.67 -8.66 -9.32 2.06 0.56 -2.44 -2.19 -1.15 -0.44 3.77 -0.04 0.53 1.32 -1.36 -1.87 -1.09 -4.77 -2.36
Solyc03g019710.3.1 (Solyc03g019710.3)
2.51 - - - -6.09 -0.15 -7.28 -4.63 -0.03 0.22 -4.3 -7.22 - -5.53 0.24 -1.54 -1.36 - - 0.76 -0.3 -8.09 - -5.95 -6.45 4.35 -6.86 -8.07 -4.97 -5.68 -4.25 -5.5 -5.44 -2.47
Solyc03g020035.1.1 (Solyc03g020035.1)
0.99 - - - - -1.65 - - 2.07 - - - - - - - - - - - -0.0 - - - - 4.63 - - - - - - -0.23 -0.23
Solyc03g034370.1.1 (Solyc03g034370.1)
1.22 -8.35 0.71 -4.12 -0.69 0.0 -2.62 -0.72 0.59 0.31 -3.53 -2.93 -8.4 - -2.46 -4.17 -3.08 - - -1.7 2.66 -0.24 -1.48 0.77 1.83 -3.96 -3.46 -2.04 0.48 -1.66 -1.01 0.76 0.58 2.43
Solyc03g112030.2.1 (Solyc03g112030.2)
1.23 -6.09 -3.07 -5.05 -0.66 -0.2 -0.43 -1.53 1.5 -1.11 -3.04 -0.54 -6.27 -3.48 -2.96 -3.57 -4.01 - - -1.49 2.08 -0.2 0.3 -0.37 -1.02 3.35 -0.61 -1.12 -1.76 -0.53 0.27 -0.71 -3.63 1.18
Solyc03g116240.3.1 (Solyc03g116240.3)
- - - - - -1.12 - - - - 0.18 - - - - - - 3.44 3.92 1.78 - 1.59 - - - - - - - - - - - -
Solyc03g117840.3.1 (Solyc03g117840.3)
-0.28 -6.45 1.17 -3.39 -0.25 -0.6 -2.91 -1.57 0.05 0.86 0.08 -0.56 -1.76 -0.46 0.56 1.43 1.34 -5.65 -6.82 -1.45 1.5 0.34 -0.44 0.24 0.59 -1.77 -1.26 -0.75 0.19 -0.52 -0.49 0.85 -1.83 1.43
Solyc04g016470.3.1 (Solyc04g016470.3)
-2.08 - - - -3.34 -3.81 -8.78 -9.52 -2.45 -2.33 -6.15 -6.67 - -10.64 -4.96 -7.12 -4.57 -5.72 -7.56 1.74 0.66 -6.51 -3.32 -3.27 -3.78 4.66 -0.35 -0.81 -0.3 -5.47 -5.94 -3.43 - -1.99
Solyc05g024195.1.1 (Solyc05g024195.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc06g009770.1.1 (Solyc06g009770.1)
-3.23 - -0.15 -2.94 -0.91 0.45 -3.32 0.04 -0.17 -1.02 -6.76 -3.3 -7.39 -6.82 -0.04 -2.45 -2.61 - -9.56 -0.4 3.6 -0.73 -3.3 2.45 2.55 -1.01 -3.39 -3.33 -3.42 -4.41 -2.05 -4.25 -0.34 -2.34
Solyc06g061280.3.1 (Solyc06g061280.3)
1.54 1.02 0.93 0.7 2.06 -0.24 -5.26 -3.53 0.15 -0.18 -1.81 -1.17 -2.98 -4.76 -0.55 -1.91 0.59 - - -0.31 1.65 -6.36 -6.91 -4.01 -4.38 1.25 -3.94 -2.82 -2.75 -4.7 -4.82 -2.35 0.75 2.66
Solyc06g066230.3.1 (Solyc06g066230.3)
3.59 - - - - -0.49 - - -4.43 - - -0.84 - - - - - - -3.65 -1.83 -3.18 - - -2.88 -2.33 3.76 - -5.9 -0.41 - -5.38 -1.23 - 2.33
Solyc06g067900.2.1 (Solyc06g067900.2)
-1.3 1.61 -0.2 3.6 -4.08 1.0 -0.8 -1.15 -0.33 0.33 -0.68 -1.43 -1.79 -2.7 -0.97 0.6 0.46 0.59 0.47 - - -1.74 -3.66 -1.74 - 0.57 -0.96 -3.5 -1.88 -2.48 -1.05 -2.43 - -0.31
Solyc06g069850.3.1 (Solyc06g069850.3)
-0.45 -7.48 -6.98 - -0.75 0.35 0.04 -1.01 0.72 0.13 -0.23 0.18 0.48 0.23 0.19 1.0 0.72 - - -0.58 2.88 -1.88 -3.2 0.17 0.78 1.48 -0.88 -0.63 0.12 -2.33 -2.4 -2.8 -0.81 -1.51
Solyc06g071690.3.1 (Solyc06g071690.3)
0.67 -4.65 -1.81 -5.65 0.05 -0.49 - -1.28 1.6 0.52 -1.19 -1.61 -1.89 -3.0 -0.17 -2.02 -1.33 - - -1.25 1.68 -0.8 -1.29 -0.44 -0.61 0.41 1.73 1.1 1.59 0.52 0.09 0.3 -2.57 1.62
Solyc06g074260.3.1 (Solyc06g074260.3)
-4.69 -11.13 -10.23 - -2.05 -0.6 0.28 -1.16 2.18 0.45 0.31 -0.24 -2.92 -3.06 1.31 -0.62 -0.04 -8.62 -7.33 -0.96 2.51 -0.94 -2.31 1.28 2.73 -3.64 -3.01 -2.35 -1.9 -2.15 -1.3 -1.79 0.55 -5.11
Solyc06g084170.3.1 (Solyc06g084170.3)
2.8 - -3.22 -3.76 -2.74 -0.75 -8.2 -3.61 -1.71 -0.19 -5.94 -4.6 - - -1.84 -3.48 -2.35 0.84 0.26 -0.35 0.34 -7.22 - -7.38 -4.1 2.02 - -6.93 -3.03 - -7.54 -3.05 1.06 3.67
Solyc07g009500.2.1 (Solyc07g009500.2)
4.49 - - - -6.4 -1.97 - - -9.48 -4.39 - -9.22 -8.17 -9.02 -3.89 -2.97 -3.41 - - -0.42 -2.14 -6.27 - -6.44 -2.54 2.67 - -9.5 -4.42 -8.3 -6.95 -0.93 - 1.47
Solyc07g018190.3.1 (Solyc07g018190.3)
0.16 - - - 0.37 1.29 -6.51 -0.49 -0.34 0.96 -1.66 -3.0 1.37 -0.26 2.02 1.64 1.02 - - -1.64 0.4 -1.68 -0.8 -0.04 0.47 1.34 0.36 0.44 0.09 -1.43 -1.63 -1.81 -2.23 -1.69
Solyc07g037940.2.1 (Solyc07g037940.2)
- - - - - -0.39 - - - - 2.5 - - - - - 1.09 1.14 3.23 0.97 2.7 - - - - - - - 1.54 - - 1.3 - -
Solyc07g039553.1.1 (Solyc07g039553.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc07g045430.3.1 (Solyc07g045430.3)
4.22 -4.78 -2.25 -2.86 -5.48 0.79 - -3.07 -0.41 -0.29 -3.56 - - - -1.15 - -4.56 -3.47 - 2.92 -1.16 -5.85 - -3.81 -2.12 -2.31 -5.61 -7.23 -4.86 -4.55 -3.41 -4.36 -3.64 1.03
Solyc07g049440.3.1 (Solyc07g049440.3)
-6.47 -10.26 - - -2.11 0.96 -4.02 0.16 1.31 -0.27 -4.98 -4.9 - - 1.89 0.42 1.31 -11.1 - 1.73 0.65 -6.83 -10.49 -1.21 0.37 3.46 -10.87 -7.72 -6.38 -8.39 -7.88 -8.04 1.0 -4.34
Solyc07g056700.1.1 (Solyc07g056700.1)
-6.23 - -4.18 - - - - - -3.18 -2.65 -6.15 - -6.87 0.28 -5.76 -4.88 - - - -2.07 -2.57 -0.64 -0.41 -1.3 0.14 2.34 3.42 2.22 1.59 0.82 1.66 -0.48 - -
Solyc07g065930.3.1 (Solyc07g065930.3)
0.84 -2.48 -0.01 -2.21 -0.13 0.71 -1.91 -0.33 1.02 0.42 -0.83 -1.46 -1.46 -0.35 -0.32 -0.5 -0.48 -3.26 -4.05 -1.02 0.82 -0.21 -0.77 -0.19 -0.17 0.87 0.42 0.58 0.77 0.12 -0.15 0.16 -0.94 1.97
Solyc08g014355.1.1 (Solyc08g014355.1)
- - - - - -1.41 - - 2.46 - - - - - - - - - - 0.64 3.06 -1.07 - - -2.05 1.87 -0.97 2.22 2.84 - 0.26 -1.52 - -
Solyc08g067260.3.1 (Solyc08g067260.3)
-4.53 -10.65 -8.73 -10.03 1.13 0.85 0.31 0.54 1.41 0.36 0.51 -0.49 -0.43 -1.05 0.56 0.22 0.48 -11.6 -12.31 -0.03 0.34 -0.89 0.13 0.63 0.3 2.05 -0.35 -0.29 -0.56 -1.59 -0.92 -3.22 0.81 -2.79
Solyc08g076720.3.1 (Solyc08g076720.3)
-3.12 -2.39 -4.15 -3.13 0.6 0.48 -0.09 0.05 0.74 0.73 -1.44 -2.04 -0.92 -0.85 1.61 2.15 1.24 -8.6 -8.26 -1.2 1.34 -1.37 -1.79 0.97 1.29 1.77 -1.66 -1.3 -1.29 -2.25 -1.9 -2.0 -1.7 -3.02
Solyc08g080650.3.1 (Solyc08g080650.3)
2.84 -0.33 -1.41 -0.64 -3.08 1.7 - -6.69 -2.93 -0.03 -0.89 -1.86 -6.35 -7.26 -1.48 -8.2 -4.05 -10.28 -11.87 3.31 2.01 -6.8 -9.93 -6.07 -4.57 1.55 -12.76 -8.96 -6.13 -9.71 -7.94 -3.23 -1.82 0.97
Solyc09g042675.1.1 (Solyc09g042675.1)
- - - - 2.73 - - - - - - - - 2.66 - - - - - - - - - 1.17 - - - 1.77 3.94 - - - - -
Solyc09g065390.1.1 (Solyc09g065390.1)
-1.74 - -4.28 -7.66 1.23 0.67 -7.06 -1.12 -0.48 0.35 1.45 0.97 -1.63 -1.32 0.25 -1.14 0.52 - - 2.53 1.09 -1.12 -3.37 -1.6 -0.37 2.02 -2.11 -0.75 -0.62 -1.09 -1.34 -0.66 0.69 -0.96
Solyc09g090970.3.1 (Solyc09g090970.3)
1.86 -9.66 1.11 -2.84 -2.51 -0.47 -3.4 -4.36 -1.72 0.06 -2.84 -1.48 -4.47 -4.62 1.01 -0.41 0.37 -10.82 -12.03 1.06 1.22 -2.36 -4.71 0.82 1.43 3.11 -6.9 -4.6 -1.61 -6.02 -3.78 -2.09 -2.59 1.29
Solyc09g091000.3.1 (Solyc09g091000.3)
2.77 -10.33 - - -5.23 0.36 -7.67 -7.09 -4.71 -0.52 -2.47 0.33 -3.31 -4.66 2.1 0.34 2.14 -10.11 -10.74 -2.18 0.48 -8.04 -6.69 -1.78 -1.55 2.58 -7.78 -4.32 -0.58 -8.37 -5.95 -0.52 -5.11 1.95
Solyc09g098225.1.1 (Solyc09g098225.1)
0.19 0.39 -0.36 -0.66 -0.51 0.22 0.52 0.35 0.58 0.09 -1.03 -0.5 0.06 -0.18 0.24 0.02 0.33 -4.54 -5.6 -0.47 -1.09 -0.01 0.08 0.07 -0.39 0.62 0.86 0.64 0.55 0.54 0.26 -0.09 -0.98 -0.25
Solyc10g017970.1.1 (Solyc10g017970.1)
-6.5 -11.14 - - - -6.45 - -10.43 -5.49 -1.55 -7.72 -6.52 -2.09 -3.5 -0.3 -7.09 -3.35 - - 2.41 -1.35 -6.35 -13.84 -1.82 -1.37 4.57 -10.82 -5.77 0.57 -9.84 -7.95 -0.49 -10.83 -6.26
Solyc10g054840.2.1 (Solyc10g054840.2)
-0.81 0.12 0.92 0.17 0.61 0.57 -2.41 0.34 0.72 1.63 -7.49 -7.12 - -9.67 1.47 0.24 0.92 -4.34 -4.55 -4.71 0.9 -0.91 -4.6 0.98 1.13 -1.96 -3.59 -1.27 -0.74 -4.03 -2.09 -4.52 2.5 -2.5
Solyc10g075070.2.1 (Solyc10g075070.2)
-3.27 -11.65 -11.6 - 0.18 1.76 -4.75 -1.23 -0.19 0.1 -5.21 -6.08 -8.69 -9.86 -0.78 -1.44 0.14 -11.46 -11.64 2.05 1.46 -1.56 -6.63 0.32 1.81 3.22 -5.41 -5.49 -5.03 -5.81 -2.95 -6.03 1.69 -3.13
Solyc10g075090.2.1 (Solyc10g075090.2)
-5.55 -13.91 -9.88 -14.87 -3.41 -2.79 -6.58 -6.46 -3.26 -3.06 -6.31 -1.41 -10.03 -9.78 0.36 0.47 -0.09 -14.53 -12.87 -0.99 -1.52 1.19 2.45 3.16 3.33 -2.29 -5.08 -3.8 -1.9 -3.16 0.03 -5.99 -3.19 -6.07
Solyc10g078230.2.1 (Solyc10g078230.2)
0.53 - - - 2.15 1.06 -3.59 -0.42 2.67 -0.73 -0.84 3.1 -5.91 -2.09 -1.32 - -3.35 - - 0.42 1.42 -4.06 -3.88 -0.47 -2.6 1.28 - - -6.46 - -4.58 - -2.39 -0.58
Solyc10g078235.1.1 (Solyc10g078235.1)
0.24 - - - 1.06 1.8 -0.64 -0.58 3.22 0.27 -2.36 2.52 - -0.93 -4.1 - -2.94 - - -1.22 0.86 -1.14 -2.89 0.77 -2.5 1.61 - -5.55 -4.25 - -1.88 - -1.75 -1.56
Solyc10g079380.2.1 (Solyc10g079380.2)
2.76 -2.23 -0.06 - - 1.07 - - -1.1 1.02 -3.15 0.23 - -1.28 -1.45 - -2.34 - - -0.27 -0.71 - - -3.91 1.05 3.44 - - -2.05 - - -0.96 -1.41 1.88
Solyc10g081190.2.1 (Solyc10g081190.2)
0.72 -2.15 -0.41 -1.4 -1.47 -0.33 -0.12 -1.26 -0.57 0.55 -0.52 -1.01 0.04 0.11 1.22 1.65 1.36 -10.12 -11.05 0.12 -0.05 -0.38 -0.45 -0.48 -0.51 0.86 0.06 -0.11 0.14 -0.21 -0.26 -0.05 0.26 0.41
Solyc10g085500.2.1 (Solyc10g085500.2)
-1.22 -3.93 0.23 -4.85 2.17 0.45 -2.95 -1.06 -0.3 0.39 - -4.34 -7.77 - 1.05 0.27 0.25 - - -0.27 1.33 -3.38 -3.73 1.08 2.19 2.07 -1.4 -0.43 -0.13 -3.87 -3.89 -3.11 0.99 -1.06
Solyc11g007450.2.1 (Solyc11g007450.2)
- - - - - - - - 4.29 - - - - - - - 0.97 - - - 3.03 - - - - - - 1.5 0.62 - - - - -
Solyc12g005730.2.1 (Solyc12g005730.2)
1.27 - -2.56 - -4.65 -2.0 -6.21 - -2.97 -2.85 -3.81 - -5.0 -4.26 -5.2 - - - - 2.35 1.28 -3.18 -3.4 0.37 1.83 3.31 -3.35 -2.18 -0.76 -2.91 -3.91 -0.61 -5.84 2.67
Solyc12g006510.2.1 (Solyc12g006510.2)
-2.58 -2.7 -5.45 -5.64 -2.32 1.16 0.29 0.5 0.68 1.46 -0.25 -1.03 -2.3 -3.96 0.62 -0.5 -0.47 -7.86 -9.05 -1.0 -0.39 0.66 1.07 1.7 1.85 1.16 -0.26 -0.47 -0.63 -0.46 0.51 -1.59 -4.1 -0.22
Solyc12g011410.1.1 (Solyc12g011410.1)
0.9 -3.45 0.82 -0.92 2.0 1.2 -9.09 0.22 0.9 2.29 -3.16 -5.81 -5.9 -8.51 -0.97 0.14 -1.1 - - -6.15 -1.06 -0.8 -3.66 0.13 0.98 -5.98 -2.55 -1.96 -1.69 -0.75 -1.17 -0.24 1.82 1.55
Solyc12g019773.1.1 (Solyc12g019773.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc12g099200.2.1 (Solyc12g099200.2)
0.84 -6.82 -1.59 -5.14 2.09 1.0 -8.63 -1.5 -1.25 1.11 -2.71 -2.71 -4.9 -5.09 0.29 0.12 1.2 - - -0.14 -0.68 0.45 -1.01 -0.25 0.26 1.34 -1.04 -0.63 0.03 0.45 0.4 1.01 0.51 0.53
Solyc12g100250.2.1 (Solyc12g100250.2)
4.18 - 1.29 0.42 - 0.8 - -8.16 - -6.71 -6.49 -1.54 -6.04 -7.24 -4.71 - - -8.82 - -2.52 0.45 -7.93 - -1.57 -2.09 1.74 - -5.64 -0.67 -6.94 -8.22 -1.67 -9.62 1.81
Solyc12g100260.1.1 (Solyc12g100260.1)
2.31 - -0.74 -3.76 -3.29 -0.18 -8.02 -6.14 -3.86 -3.3 -3.56 0.42 -2.35 -3.93 -4.06 - -7.28 - - -0.34 3.01 -6.9 - -0.6 -0.99 2.99 - -4.07 0.44 - - -0.16 -4.78 2.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.