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Heatmap: Cluster_3 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
30.52 6.82 5.75 11.75 12.55 54.42 54.18 83.65 62.79 0.03 0.06 0.0 107.18
8.2 4.6 2.71 4.55 5.37 17.49 12.69 13.15 13.18 5.04 4.2 3.79 26.05
33.97 7.35 41.28 42.79 44.41 50.1 62.06 56.46 61.73 34.17 36.8 32.14 43.6
16.93 6.4 7.85 10.81 9.23 16.11 14.04 15.01 29.19 9.55 10.42 9.24 34.35
11.71 0.8 34.19 43.82 30.17 23.94 20.29 18.55 21.16 17.58 21.83 22.09 120.55
46.14 8.17 14.78 16.44 17.37 60.48 65.07 66.32 61.62 38.1 40.05 36.32 79.14
30.93 6.59 46.4 38.14 32.95 66.79 65.49 61.66 61.37 19.75 23.52 23.4 63.43
25.8 6.5 20.47 32.02 27.79 39.05 45.55 51.14 48.44 22.98 22.29 25.52 51.27
55.08 15.48 46.67 49.75 51.02 93.69 111.2 110.45 114.4 52.6 58.77 58.78 90.76
23.79 2.05 0.0 0.0 0.0 18.93 153.83 141.66 147.59 14.23 12.22 10.89 216.99
72.92 26.05 79.96 42.86 44.55 81.49 83.22 72.67 142.94 33.26 30.45 29.51 148.21
2.55 0.68 0.84 2.07 1.66 2.28 3.31 4.14 5.22 2.79 2.23 2.43 6.2
50.8 10.71 20.52 21.55 18.93 80.99 89.32 86.2 90.06 16.01 17.19 16.46 159.76
15.16 11.42 7.31 11.24 10.22 17.9 20.5 19.4 23.13 11.7 10.43 11.4 19.01
16.98 4.88 7.03 11.75 10.02 28.82 33.04 38.64 27.1 9.2 8.28 9.9 39.19
11.67 7.89 13.38 12.23 15.79 24.97 24.96 25.06 24.13 11.89 10.95 11.57 17.28
1.02 0.45 1.05 1.38 1.23 0.71 1.62 1.56 1.54 0.49 0.43 0.58 5.51
13.72 6.95 7.36 13.14 7.49 22.17 21.53 18.75 22.89 5.61 6.29 7.24 20.33
10.62 3.74 12.11 13.5 14.74 25.36 23.9 21.66 26.6 11.11 10.17 9.7 45.5
57.29 5.47 44.54 31.44 42.8 82.54 97.0 102.84 94.64 40.39 43.91 41.95 162.88
6.69 0.35 0.0 0.0 0.0 17.4 11.85 14.84 9.2 1.04 1.48 0.77 13.97
885.44 186.85 467.46 542.13 414.8 1602.32 1719.02 1796.34 1618.37 718.7 781.4 754.59 2641.94
45.33 26.29 10.21 12.79 13.83 60.99 54.7 47.85 64.65 34.2 30.37 32.17 64.72
17.16 7.13 18.01 21.48 22.55 27.32 25.98 23.45 32.2 9.54 9.66 9.91 34.01
82.51 10.67 69.96 58.35 66.11 58.31 54.37 49.47 62.94 58.13 58.56 58.57 324.57
65.37 7.52 30.33 19.96 30.57 77.45 90.66 100.64 92.88 51.62 46.93 51.73 136.3
28.83 1.9 17.72 9.71 13.06 63.14 58.7 50.55 53.17 14.39 15.64 16.91 41.61
34.75 6.65 32.28 31.42 29.14 47.09 58.51 65.27 59.46 27.25 28.54 28.32 57.02
19.16 5.24 12.76 12.01 13.84 36.04 32.47 25.86 40.33 14.79 14.56 14.2 50.01
6.43 0.56 3.41 4.28 4.27 10.5 10.75 10.65 9.95 4.75 4.72 4.99 12.19
15.41 3.35 3.4 14.1 6.56 23.4 17.69 11.97 15.66 4.6 4.86 4.88 35.93
11.03 1.7 5.39 7.82 7.37 16.03 15.1 14.46 17.83 7.71 7.01 6.55 23.65
10.22 3.59 5.81 6.07 6.26 15.19 15.35 14.01 17.23 8.6 8.87 8.86 36.64
7.02 3.7 3.09 3.25 2.38 12.46 11.12 8.9 14.4 7.16 7.78 7.69 14.38
4.81 0.0 10.37 10.08 12.32 7.34 9.14 11.86 10.44 5.38 6.02 7.22 44.66
29.26 3.63 32.35 39.28 36.67 28.67 30.2 33.25 33.32 43.3 48.58 44.61 148.95
5.77 0.92 4.34 6.91 6.25 11.71 13.09 10.43 14.72 3.89 3.65 3.56 9.21
33.65 3.16 37.32 38.21 42.56 48.61 47.64 44.95 51.08 43.79 43.19 45.45 151.94
19.19 1.2 7.46 9.52 15.65 25.35 32.89 33.42 29.48 28.0 27.96 29.23 47.45
2.57 0.28 0.51 0.96 1.14 2.62 3.84 4.95 4.53 0.47 0.54 0.56 4.6
422.51 32.24 528.82 489.6 607.94 723.05 908.53 857.05 768.38 421.13 488.26 472.08 518.69
35.59 0.0 0.0 0.0 0.0 155.47 58.36 66.19 57.82 23.53 36.51 28.09 140.02
2.8 1.22 0.03 0.0 0.03 3.03 2.81 2.44 2.72 2.67 2.78 2.85 5.94
1.79 1.37 2.43 3.33 3.54 3.97 3.56 3.96 4.34 1.53 1.97 1.82 11.31
2.22 0.18 0.63 0.0 0.0 2.26 1.84 1.69 2.25 2.16 2.37 3.1 9.72
4.83 1.13 3.39 5.68 5.01 5.15 7.08 7.94 7.34 2.29 2.71 3.26 5.99
14.52 5.2 9.7 13.48 11.71 16.59 21.74 24.48 21.91 10.92 11.92 13.08 25.24
32.98 26.86 24.07 28.76 28.21 41.96 51.97 58.28 53.74 27.29 24.46 23.14 85.04
27.54 8.4 40.2 40.37 26.24 38.88 43.45 47.01 47.51 24.83 25.68 26.08 38.26
18.05 9.92 11.66 11.9 9.1 33.95 33.16 32.55 40.35 5.28 5.32 6.55 42.1
9.05 8.19 6.41 6.14 9.44 17.98 15.38 13.21 17.13 13.25 13.34 14.64 20.79
14.68 0.0 0.0 2.9 0.0 32.66 26.64 31.29 30.16 1.39 4.05 3.68 29.61
20.36 1.92 26.19 25.37 22.55 24.58 25.16 24.84 33.17 14.22 16.68 13.08 52.12
21.6 8.67 9.31 6.42 8.9 49.04 38.24 27.52 48.55 11.77 11.13 12.31 100.0
12.47 1.4 6.81 16.8 9.27 7.55 9.51 7.62 7.54 11.06 9.22 10.01 51.54
235.03 88.56 164.83 189.08 236.01 404.99 322.97 304.87 383.75 126.82 143.8 145.69 352.16
21.93 23.04 18.08 18.25 22.43 26.29 22.98 18.94 23.48 45.64 49.87 42.91 196.93
20.96 7.0 5.16 11.84 7.4 12.15 38.22 35.83 57.5 12.79 12.24 13.62 71.76
177.06 41.44 11.5 7.21 10.32 797.95 729.68 482.42 363.35 2.49 3.22 1.9 853.05
17.22 3.86 7.92 13.45 7.64 39.44 39.59 33.08 46.46 21.44 19.71 22.64 70.28
23.9 8.67 37.82 33.16 42.1 31.22 27.06 20.63 28.87 24.87 25.73 22.81 141.99
28.87 7.46 18.16 20.23 23.11 60.48 71.47 64.02 71.92 44.97 41.04 44.96 43.8
23.94 12.0 20.42 21.77 27.3 22.61 23.49 19.76 25.98 37.58 36.68 41.57 80.77
0.45 0.0 0.0 0.0 0.0 5.23 1.99 2.21 0.0 0.0 0.0 0.0 5.45
148.36 4.82 91.87 186.63 85.19 181.04 332.08 332.21 360.98 125.11 138.89 127.32 440.23
5.23 0.11 0.0 0.0 0.0 12.53 5.29 7.65 12.97 8.52 7.76 10.72 19.75
11.06 2.76 6.85 11.59 8.68 12.72 13.72 14.03 17.51 8.65 8.81 9.4 22.83
257.8 46.67 229.05 271.68 269.66 392.0 404.13 380.47 417.34 241.45 251.56 238.5 461.13
22.97 9.03 21.29 22.29 26.76 43.19 45.22 50.47 52.82 39.58 44.36 39.35 85.07
27.15 22.15 21.88 31.51 32.67 60.07 66.53 59.98 51.28 33.5 35.81 33.57 39.8
49.07 9.69 11.9 12.91 11.32 68.69 68.92 67.42 79.78 60.19 53.79 55.91 107.4
23.24 0.0 11.54 10.62 27.36 30.77 70.28 59.48 30.46 7.81 0.0 0.0 156.85
20.03 7.98 17.21 26.97 18.6 25.8 26.29 31.66 32.63 20.31 20.3 21.04 51.35
4.77 3.27 1.3 1.97 1.55 4.96 5.5 5.91 6.21 3.1 2.41 3.13 5.38
8.87 5.93 7.46 9.43 7.55 13.5 16.88 15.9 17.66 10.87 10.34 9.91 12.98
5.84 1.07 0.0 0.0 0.0 4.83 6.14 6.39 6.74 6.93 5.89 7.55 11.92
45.1 65.37 37.56 31.08 39.66 107.82 118.95 133.96 129.0 25.42 26.09 27.5 193.23
3.12 1.22 2.2 2.63 2.52 5.09 6.05 5.54 6.16 3.15 3.07 3.6 4.33

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)