Heatmap: Cluster_58 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene	Vegetative Sporophyte	Adult Sporophyte	Leaf (0 mg/L NH4NO3)	Leaf (30 mg/L NH4NO3)	Leaf (90 mg/L NH4NO3)	Sporophyte; w/o NH4NO3, w/o cyanobacteria	Sporophyte; w/o NH4NO3, w cyanobacteria	Sporophyte; w NH4NO3, w cyanobacteria	Sporophyte; w NH4NO3, w/o cyanobacteria	Root Tip, D-3 6h mock treated	Root Tip, D-3 6h 0.1 uM IAA treated	Root Tip, D-3 6h 0.5 uM trans-zeatin treated	Microsporocarp
Azfi_s0001.g000185	0.28	2.54	18.16	16.59	21.49	0.33	0.74	0.69	0.33	2.63	1.66	2.82	0.81
Azfi_s0003.g007954	0.44	0.0	5.24	4.35	5.89	0.73	0.53	0.91	0.94	0.0	0.15	0.45	0.0
Azfi_s0003.g007959 (CHS)	6.07	42.12	81.87	67.24	134.4	17.1	6.71	10.71	11.64	7.73	7.1	6.45	8.75
Azfi_s0004.g008352 (RLP56)	0.8	1.42	4.03	1.99	5.64	0.82	1.32	0.59	1.13	2.3	1.95	2.13	0.36
Azfi_s0006.g010071	3.13	0.0	765.07	646.12	1208.43	6.71	5.03	0.0	6.73	0.0	0.0	0.0	0.0
Azfi_s0007.g010611	1.24	1.04	11.91	21.15	25.11	0.06	0.4	0.28	0.11	0.37	0.33	0.48	6.19
Azfi_s0008.g011497	6.73	2.24	203.59	151.95	245.42	2.86	7.63	5.48	4.92	15.88	27.22	22.13	13.68
Azfi_s0011.g012516 (FRO6)	0.09	1.11	392.7	765.25	738.87	0.16	1.32	0.15	0.22	43.61	50.5	63.95	0.0
Azfi_s0012.g013049	5.29	1.22	70.1	66.18	68.58	6.43	6.12	5.88	6.6	3.39	3.38	3.43	10.06
Azfi_s0014.g013551 (CAM4)	0.0	0.0	1258.78	951.89	914.98	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0017.g014524	0.0	0.0	0.33	0.27	0.58	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0019.g015238 (OMT1)	0.0	0.0	3.07	1.22	5.79	0.0	0.0	0.0	0.0	0.2	0.29	0.19	0.0
Azfi_s0021.g015775	22.54	0.41	459.01	529.43	616.98	3.28	7.87	1.0	0.64	100.33	116.03	122.24	0.0
Azfi_s0021.g015882 (MYB97)	0.8	1.03	7.56	7.72	13.22	0.54	0.59	0.58	0.35	2.38	2.55	2.54	2.97
Azfi_s0025.g021322	0.0	0.0	0.04	0.0	0.02	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0025.g023211 (GLT1)	0.0	0.0	0.02	0.0	0.09	0.0	0.0	0.01	0.0	0.0	0.0	0.0	0.0
Azfi_s0034.g025328 (HK3)	0.54	0.2	5.49	5.18	11.54	0.41	0.32	0.25	0.48	0.83	0.98	1.06	1.75
Azfi_s0037.g026025 (PP2C5)	0.68	1.39	21.17	31.06	43.54	0.9	1.22	1.82	2.47	2.25	0.69	1.14	0.0
Azfi_s0038.g026130 (GLR2.9)	0.0	0.02	2.26	2.78	2.96	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0038.g026158 (GLR2)	0.39	0.21	17.75	14.66	17.05	0.0	0.0	0.25	0.4	0.25	0.0	0.0	0.0
Azfi_s0038.g026322	1.12	0.44	144.25	121.06	103.0	0.23	0.69	1.01	0.0	18.59	24.04	15.01	0.71
Azfi_s0038.g026352	0.81	0.09	9.05	9.41	18.35	7.83	2.77	3.85	6.83	3.25	3.35	3.54	4.29
Azfi_s0040.g026612	6.94	5.63	42.53	34.1	82.21	15.87	6.81	3.65	8.44	5.62	3.46	3.81	7.38
Azfi_s0044.g027551 (MCCA)	0.0	0.0	0.1	0.0	0.07	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0045.g029752	0.0	0.0	2.66	0.0	2.63	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0047.g030274 (CYP98A9)	1.77	1.07	20.95	26.73	32.44	2.75	3.39	4.11	4.31	3.16	3.38	4.1	1.41
Azfi_s0049.g030849	2.5	2.58	26.59	30.01	30.3	5.38	4.88	4.08	7.92	1.03	1.01	0.98	2.45
Azfi_s0051.g031363	0.52	2.49	39.34	61.86	163.85	1.31	0.51	0.84	3.66	8.21	6.03	7.12	22.98
Azfi_s0053.g031689 (HOG1)	0.0	0.0	0.26	0.23	0.25	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0053.g031915 (GAPCP-1)	0.0	0.03	0.12	0.15	0.35	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0053.g032178 (CAT2)	0.0	0.0	0.04	0.0	0.03	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0056.g034184 (TBL10)	0.57	0.07	8.97	11.57	23.84	0.11	0.3	0.07	0.22	4.05	3.87	4.31	0.35
Azfi_s0060.g034791	0.0	0.0	0.0	0.2	0.31	0.0	0.0	0.0	0.16	0.0	0.0	0.0	0.0
Azfi_s0062.g035225	52.68	46.4	225.55	321.0	426.92	30.51	58.83	41.95	27.53	89.03	78.73	74.96	9.99
Azfi_s0064.g035423	2.38	1.41	31.75	39.58	64.75	0.99	1.56	0.76	0.84	3.59	5.01	5.04	1.8
Azfi_s0073.g037113	0.17	0.16	2.6	2.11	2.8	0.0	0.0	0.0	0.0	0.0	0.47	0.12	0.0
Azfi_s0085.g039615	0.0	0.0	0.08	0.09	0.08	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0085.g039642 (NAGS2)	0.0	0.0	0.0	0.1	0.24	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0090.g042713 (PTR1)	1.4	0.45	54.41	48.19	43.95	0.76	1.01	0.88	0.4	8.87	9.84	8.63	1.97
Azfi_s0098.g043953 (PEN3)	0.05	0.0	0.37	0.76	2.01	0.14	0.13	0.26	0.2	0.32	0.14	0.3	0.39
Azfi_s0099.g044011 (ORF02)	0.75	3.09	449.67	364.27	351.87	1.29	1.31	1.3	1.9	65.85	54.61	72.56	1.97
Azfi_s0103.g044651	78.24	82.46	1504.72	1251.02	1317.99	16.27	28.77	35.09	29.19	220.0	130.74	163.94	17.84
Azfi_s0103.g044681 (BW52)	0.12	0.4	13.55	10.96	22.87	0.29	0.11	0.1	0.43	0.91	0.54	0.36	0.0
Azfi_s0109.g045399	0.04	0.15	3.28	2.08	4.81	0.0	0.03	0.0	0.0	0.0	0.11	0.06	0.82
Azfi_s0109.g045410	0.31	1.49	35.46	32.5	25.5	0.3	0.96	0.07	0.04	4.13	6.01	5.79	0.48
Azfi_s0116.g046349	3.04	0.0	42.47	29.94	42.2	1.68	3.48	2.18	0.99	4.94	6.5	4.94	11.03
Azfi_s0117.g046579	1.51	4.29	4991.97	4503.3	6163.76	0.5	0.19	0.0	0.0	21.69	28.79	22.32	0.0
Azfi_s0120.g046809	1.7	16.09	105.24	168.89	163.02	0.04	0.67	0.75	0.08	16.48	23.44	39.86	0.64
Azfi_s0121.g046895	16.47	6.6	78.41	75.62	78.64	25.38	20.28	18.58	22.75	12.12	14.02	13.03	5.14
Azfi_s0129.g048922 (LAC11)	20.07	25.84	144.58	277.54	220.43	1.35	5.69	3.28	4.56	62.23	22.12	50.74	16.42
Azfi_s0129.g048993	45.22	74.81	205.09	356.68	452.92	9.03	9.25	6.09	13.38	43.31	49.61	63.86	50.31
Azfi_s0132.g049186 (GLUR3)	0.08	0.0	2.82	5.1	13.85	0.22	0.07	0.04	0.03	0.19	0.17	0.43	0.19
Azfi_s0134.g049408	2.19	3.12	25.47	25.04	24.46	1.72	1.9	1.39	1.45	1.8	1.56	2.12	0.96
Azfi_s0135.g050012	0.0	0.0	0.0	0.09	0.28	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0145.g051696 (XTH5)	26.35	16.98	127.14	159.62	254.32	2.39	6.76	1.14	2.06	52.2	57.93	56.42	8.26
Azfi_s0145.g051698	3.42	0.93	39.04	50.34	69.24	0.22	0.73	0.14	0.21	0.58	0.71	0.95	4.29
Azfi_s0176.g056011	18.47	28.47	316.02	475.25	553.59	3.44	7.8	6.72	8.52	82.94	96.46	90.68	4.24
Azfi_s0176.g056044	83.12	0.44	568.81	1082.27	1251.61	55.62	55.26	40.19	80.32	49.64	63.06	50.08	22.92
Azfi_s0201.g057604 (emb1075)	0.01	0.0	2.89	3.51	9.84	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.21
Azfi_s0205.g057784 (PME2)	0.09	2.13	101.34	83.49	128.47	0.05	0.05	0.03	0.0	0.12	0.06	0.18	0.3
Azfi_s0206.g057843 (LOX1)	0.0	0.0	29.9	27.03	56.14	0.0	0.0	0.0	0.0	0.83	0.61	0.96	0.0
Azfi_s0225.g058905	10.7	0.74	31.93	36.36	46.98	5.05	5.97	4.83	5.51	11.61	16.37	16.38	3.01
Azfi_s0226.g058991	6.82	3.41	53.84	55.65	55.82	7.63	6.48	5.85	6.11	13.63	15.09	16.7	6.05
Azfi_s0241.g059763 (LAC4)	48.5	27.17	396.09	423.35	383.19	8.54	19.4	17.55	16.38	59.27	51.9	53.11	21.94
Azfi_s0274.g061354	0.12	0.81	2.96	3.2	7.13	0.03	0.05	0.0	0.0	0.22	0.03	0.1	0.0
Azfi_s0274.g061355 (SD2-5)	0.03	0.4	1.64	1.21	4.6	0.0	0.03	0.0	0.0	1.16	0.56	0.73	0.0
Azfi_s0291.g063345	0.22	8.81	8.76	17.26	22.51	1.38	1.16	1.53	0.66	1.96	0.9	1.61	3.36
Azfi_s0293.g063473	0.0	0.0	0.99	0.0	1.95	0.0	0.0	0.0	0.0	0.0	0.31	0.0	0.0
Azfi_s0318.g064387	1.02	4.44	24.88	38.88	112.96	1.02	1.45	0.66	1.04	5.16	2.6	3.81	0.0
Azfi_s0329.g065317 (RING)	0.14	0.07	1.59	1.89	3.91	0.4	0.3	0.22	0.55	0.64	0.55	0.87	0.43
Azfi_s0334.g065488	0.11	2.62	2.27	5.96	7.68	0.46	0.2	0.54	0.23	0.38	0.12	0.14	0.13
Azfi_s0334.g065497	0.22	0.11	5.43	11.14	13.13	1.48	1.1	1.49	0.74	0.89	0.77	0.54	0.0
Azfi_s0447.g070685 (RCD3)	0.13	2.07	16.5	6.96	28.17	0.2	0.12	0.06	0.0	4.43	2.83	3.0	1.77
Azfi_s0456.g071364	0.0	0.0	4.36	1.67	2.7	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0456.g071474 (ACLA-2)	0.0	0.0	0.06	0.0	0.12	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0465.g072454	0.0	0.0	0.28	0.0	0.27	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0468.g072851 (PAO5)	14.64	42.53	252.7	142.21	229.44	19.12	21.62	31.93	38.96	56.91	45.43	47.12	25.47
Azfi_s0475.g073008	0.0	0.0	1.39	0.0	0.66	0.0	0.0	0.19	0.0	0.2	0.0	0.1	0.0
Azfi_s0514.g074944	0.0	0.0	6.41	0.0	12.65	0.0	2.23	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0516.g074982	0.05	0.0	3.42	3.37	10.55	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0523.g075283	0.12	0.13	1.49	1.48	4.45	0.0	0.0	0.0	0.0	0.06	0.17	0.24	0.0
Azfi_s0566.g077503	0.02	0.0	1.5	0.33	0.64	0.24	0.0	0.0	0.35	0.11	0.09	0.52	0.0
Azfi_s0635.g080369 (ARA3)	0.0	0.0	0.36	0.46	0.56	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0648.g080905	0.02	0.0	101.3	187.17	619.12	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0648.g080906	0.0	0.06	1.05	0.23	1.46	0.0	0.04	0.06	0.0	0.06	0.0	0.18	0.0
Azfi_s0679.g081953 (SYP23)	0.0	0.0	0.0	0.16	0.4	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0679.g081971 (DIS1)	0.0	0.0	0.11	0.27	0.21	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0707.g082852 (BIP)	0.0	0.0	0.15	0.1	0.24	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0712.g083070 (PER1)	0.0	0.0	0.17	0.0	0.34	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0748.g085056	0.0	0.0	0.09	0.0	0.18	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0759.g085591	0.0	0.0	0.14	0.06	0.13	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0772.g086217 (GAPCP-2)	0.0	0.0	1.05	0.37	2.95	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0829.g088349	0.0	0.0	0.05	0.06	0.05	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0857.g089744 (YKT62)	0.0	0.0	0.66	0.66	0.43	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0870.g090592	26.22	10.06	242.17	396.11	355.53	4.47	13.62	25.15	22.93	64.63	82.86	91.57	106.89
Azfi_s0898.g091685	0.0	0.0	0.05	0.0	0.1	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0898.g091700 (ADH2)	0.0	0.0	0.06	0.08	0.19	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0901.g091881	0.0	0.0	0.38	0.12	0.26	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s0953.g093877	0.0	0.0	0.1	0.0	0.1	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s1063.g096428	0.0	0.0	0.61	0.27	0.6	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s1070.g096752	0.0	0.0	0.17	0.0	0.49	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s1070.g096819	0.0	0.0	0.48	0.0	0.59	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s1105.g097655 (RCD3)	0.18	0.0	10.44	11.88	8.6	0.05	0.2	0.0	0.0	1.63	2.72	0.29	0.47
Azfi_s1195.g099350	0.0	0.0	0.07	0.0	0.14	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s1197.g099364	3.01	4.4	44.41	58.1	58.02	0.66	1.13	0.7	0.7	13.01	19.37	9.86	0.57
Azfi_s1345.g101888 (R1)	0.0	0.0	0.0	0.04	0.07	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s1459.g103356	0.0	0.02	0.48	0.48	0.4	0.0	0.0	0.06	0.0	0.0	0.0	0.0	0.0
Azfi_s1463.g103412 (RSH2)	0.04	0.25	3.12	1.57	5.33	0.0	0.12	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s1579.g104416	0.08	0.33	2.7	2.03	4.25	0.0	0.17	0.0	0.24	0.73	0.54	0.46	0.0
Azfi_s1631.g104947 (APK3)	0.0	0.0	0.05	0.13	0.11	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s1830.g107248	0.0	0.0	0.06	0.08	0.06	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s2263.g110058 (PGM)	0.0	0.0	0.05	0.06	0.2	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s2263.g110065 (HMG)	0.0	0.0	2.17	0.0	2.71	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s2287.g110208	0.0	0.0	0.1	0.04	0.05	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s2297.g110306 (PDI5)	0.0	0.0	0.26	0.31	0.38	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s2505.g111925 (UBA 2)	0.0	0.0	0.06	0.0	0.03	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s2629.g112458	11.06	1.43	677.01	527.08	484.18	2.63	2.41	0.65	3.82	11.37	17.45	8.35	4.92
Azfi_s2984.g113926	0.0	0.0	26.96	31.34	26.23	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s3052.g114291	0.0	0.0	7.09	6.23	17.49	0.0	1.42	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s3075.g114476	0.88	0.04	11.6	8.64	8.06	0.98	0.87	2.83	0.71	0.59	0.3	0.61	0.76
Azfi_s3314.g115292	38.29	4.97	223.74	225.74	327.5	22.49	18.82	1.99	44.51	7.19	6.35	7.02	8.02
Azfi_s3385.g115530	0.0	0.0	0.04	0.05	0.04	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s3441.g115680	0.0	0.0	0.16	0.07	0.1	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
Azfi_s4125.g118063 (BGLU40)	1.74	0.0	23.94	23.31	18.77	1.11	1.13	1.42	1.72	1.23	0.98	1.78	0.0
Azfi_s4296.g118637 (GSL1)	0.6	0.26	4.99	6.83	8.15	0.53	1.13	0.53	0.0	0.59	0.37	1.48	1.03

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)