Heatmap: Cluster_296 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc00g136260.1.1 (Solyc00g136260.1)
-2.1 -9.51 -2.18 -5.15 -0.46 -0.21 -5.93 -0.48 -2.58 0.36 1.46 0.08 -3.17 -6.68 -2.6 -2.62 -2.59 -10.44 - 0.48 2.32 0.29 -1.19 0.23 0.84 1.19 0.88 1.18 1.13 0.97 0.45 0.12 0.16 -2.39
Solyc00g265510.2.1 (Solyc00g265510.2)
-8.5 - - - - -14.72 - - -11.5 -6.77 -8.77 -8.45 -9.18 -6.99 - - - - -12.97 -2.46 5.04 -6.74 - -8.58 -3.22 -4.75 -8.4 -5.4 -2.78 -5.64 -6.48 -1.55 - -2.28
Solyc01g005030.3.1 (Solyc01g005030.3)
-0.3 -1.66 -0.94 -1.87 -1.07 -0.87 -0.13 -1.47 -0.21 0.51 -1.33 -1.5 -0.72 -0.74 -0.33 -0.34 -0.21 2.11 2.21 0.77 0.59 -0.62 -1.03 -0.84 -0.82 1.43 -0.27 -0.27 -0.05 -0.46 -0.5 -0.41 -1.86 -0.23
Solyc01g091420.2.1 (Solyc01g091420.2)
-0.78 -3.33 -0.39 -1.55 -1.34 -1.88 -1.53 -2.0 -1.54 -2.92 -3.52 -2.58 -2.63 1.09 -4.33 -6.45 -6.36 - - 1.44 3.57 -1.61 -1.9 -1.85 -1.94 0.11 1.26 1.43 1.87 -0.09 -0.87 -1.47 -4.64 -1.12
Solyc01g101060.3.1 (Solyc01g101060.3)
1.71 -0.98 -0.64 -2.67 -0.37 -0.35 0.54 -1.37 -0.82 0.7 0.85 -0.42 0.8 -0.38 -0.58 -0.83 -0.74 -7.2 -7.56 -0.42 2.13 -0.84 -1.08 -0.98 -0.56 0.74 -1.95 -1.52 -0.86 -1.11 -1.12 0.18 0.12 1.86
Solyc02g014730.3.1 (Solyc02g014730.3)
2.55 - -5.97 -6.3 -2.69 -4.36 -5.19 - 1.6 -0.83 -2.71 -6.52 2.25 1.58 -4.25 - -3.44 - - -3.74 1.66 -6.12 -6.25 -5.06 -5.43 -3.76 -1.89 -3.73 -5.49 -5.09 -3.65 -7.52 -6.23 3.63
Solyc02g031920.3.1 (Solyc02g031920.3)
-4.93 - - - -0.92 4.54 -8.88 0.9 1.85 -0.12 - - -6.64 - - -4.03 -5.58 - - -3.71 0.63 -7.9 - -7.69 -7.38 -0.11 - -8.32 -8.12 - -6.14 -7.59 0.15 -
Solyc02g031930.2.1 (Solyc02g031930.2)
- - - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc02g031940.2.1 (Solyc02g031940.2)
- - - - - -2.7 - -5.33 -2.17 -3.69 - - - - - - - - - 0.89 4.7 -3.85 - -6.87 -1.07 2.0 - -9.01 -0.51 - - -1.4 -6.84 -
Solyc02g031950.3.1 (Solyc02g031950.3)
-5.51 - - - -5.66 -3.83 - -5.82 -7.02 -7.64 -11.39 -11.43 -10.82 -7.45 -5.34 -5.93 -5.95 - -13.22 2.52 4.36 -4.48 - -7.09 -0.72 2.46 - -6.23 -0.08 -9.31 -6.96 -1.22 -6.35 -9.94
Solyc02g086290.1.1 (Solyc02g086290.1)
0.71 -5.11 - -5.07 1.13 -2.04 -2.57 -2.98 -1.35 -0.15 -2.43 -4.62 -2.13 -0.82 -4.34 -3.8 - -4.95 -5.61 -0.01 3.34 -0.16 -3.25 -1.25 0.1 1.43 -1.27 -0.57 0.12 -0.58 -0.72 1.96 -2.24 1.71
Solyc02g089480.1.1 (Solyc02g089480.1)
1.8 -0.61 1.32 -1.01 1.61 1.29 - 0.12 0.34 0.32 -1.42 -0.86 - -5.42 -1.25 -1.91 -0.96 - - -0.73 1.56 -0.12 -2.27 -1.18 -1.74 -0.85 -1.18 -1.34 -2.37 -0.26 -0.3 0.23 -1.59 2.45
Solyc02g092330.3.1 (Solyc02g092330.3)
-0.89 -0.99 1.34 0.98 -0.17 -0.21 -1.09 -0.21 -0.41 0.14 -2.09 -1.69 -1.1 -0.88 0.11 -0.08 -0.08 0.04 1.25 -0.28 -1.02 0.12 -0.19 0.0 0.11 0.44 0.44 0.37 0.27 0.27 0.02 0.06 -0.05 -0.42
Solyc03g031830.2.1 (Solyc03g031830.2)
-0.47 -1.39 -1.14 -0.52 0.3 -0.49 0.21 -0.92 -0.28 -0.06 -0.57 -0.72 0.08 -0.22 -1.44 -3.1 -2.27 -8.47 -9.57 -0.52 1.25 1.03 -0.12 0.55 1.08 -0.18 0.07 0.57 0.99 0.99 0.77 1.47 -1.7 -0.63
Solyc03g034105.1.1 (Solyc03g034105.1)
- - - 0.02 - 1.06 - - - - - - - - - - - 4.04 - -0.49 3.63 -1.39 - - - - - -1.89 - -0.56 - - - -
Solyc03g097580.3.1 (Solyc03g097580.3)
-3.86 -9.29 -0.27 -5.03 -8.97 -3.37 - -4.01 -1.97 0.24 -1.2 -2.7 -1.68 -3.65 2.01 2.13 2.46 -11.1 - -2.96 2.77 -0.94 -1.52 -0.86 -1.6 -2.59 0.86 0.54 -0.93 0.7 0.34 -0.39 -3.63 -2.5
Solyc03g116225.1.1 (Solyc03g116225.1)
-6.74 - - - - -9.57 -12.07 -10.2 -5.84 -7.51 -9.22 -8.58 -8.73 -8.32 - - - - - 2.59 3.29 0.35 -1.3 -0.72 -0.47 -1.84 0.63 1.74 2.16 1.01 0.33 1.13 -12.74 -13.47
Solyc03g116230.3.1 (Solyc03g116230.3)
- - - -12.45 -10.78 -10.2 - -9.75 -3.91 -8.57 -6.47 -7.42 -8.88 -9.33 -8.61 - -12.06 - - 3.43 4.47 -2.87 -9.93 -4.5 -4.13 -5.94 -8.57 -3.59 -2.96 -2.27 -2.85 -2.87 - -
Solyc03g117055.1.1 (Solyc03g117055.1)
0.36 -0.09 -0.67 0.52 0.21 0.13 -1.14 -0.96 -0.39 -0.08 0.62 0.38 -0.29 -0.37 0.12 0.17 -0.17 -3.11 -2.1 0.15 1.58 -0.15 -1.21 -0.56 0.08 -0.31 -1.99 -0.54 0.23 -0.13 -0.3 1.02 -0.73 1.29
Solyc03g119510.3.1 (Solyc03g119510.3)
0.33 -1.38 - -3.01 -3.29 -2.27 -2.12 -2.12 -2.03 0.29 0.16 -0.21 0.47 -1.37 -0.3 0.12 0.44 - - -1.92 -2.95 1.01 0.57 0.51 0.98 -1.7 0.9 1.25 1.11 1.58 1.33 1.55 -2.48 -1.43
Solyc04g007767.1.1 (Solyc04g007767.1)
-2.91 - - - -4.93 -0.33 - -2.22 -2.64 - - - -5.15 -5.35 - - - - - 0.61 3.26 0.74 -5.86 -0.32 2.56 2.23 -6.13 -0.05 2.36 -2.9 -1.19 0.72 -2.86 -
Solyc04g007770.3.1 (Solyc04g007770.3)
-10.39 - - - - -11.44 - - -6.69 - -9.83 -10.61 -8.67 -9.31 -13.52 - -14.08 - - 2.25 3.66 -1.21 -8.24 -1.53 1.56 3.42 - -2.57 0.49 -5.29 -3.35 -1.1 - -
Solyc04g077220.3.1 (Solyc04g077220.3)
3.24 - -0.52 -4.27 -0.04 -0.62 - -3.25 -3.7 -1.25 -8.28 -1.79 -6.97 -4.36 -2.87 -6.38 -3.47 -6.68 - 0.46 2.21 -2.14 -7.19 -3.51 -2.15 2.95 -3.87 -2.5 -0.61 -1.82 -2.61 0.39 -2.27 1.93
Solyc05g006920.3.1 (Solyc05g006920.3)
-1.39 0.86 -5.18 -1.3 -0.21 -0.31 -6.05 -2.01 -0.74 0.68 -1.96 -1.5 0.33 0.4 -2.41 -2.88 -2.07 - - -0.01 1.3 1.01 -1.67 -0.56 -0.17 -0.94 0.39 0.8 1.23 1.41 0.94 2.2 -0.25 -2.35
Solyc05g013950.1.1 (Solyc05g013950.1)
- - - - - -1.06 -0.14 - - - -0.92 - - - - - - - - 1.41 4.64 - - - - 0.57 -0.38 -2.11 -1.96 0.44 - - -1.17 -
Solyc05g018657.1.1 (Solyc05g018657.1)
0.61 -3.59 -1.9 -1.35 0.36 -0.65 -1.71 -2.49 -1.05 0.02 0.39 0.19 1.15 0.6 0.16 -0.25 -0.62 -5.67 -4.55 -0.28 1.13 0.42 -0.18 0.43 0.78 0.9 -0.17 0.29 0.66 0.24 -0.04 0.87 -3.91 0.1
Solyc05g052360.2.1 (Solyc05g052360.2)
1.51 - -0.44 - -0.94 -3.16 -2.28 -6.8 -3.2 -2.62 -3.51 -4.93 -2.85 -3.52 -3.08 -3.71 -3.0 - - -2.67 3.98 -7.85 -7.14 -6.55 -8.49 -2.07 -4.76 -4.4 -3.85 - -7.63 -6.21 -6.12 3.61
Solyc05g053620.3.1 (Solyc05g053620.3)
1.17 0.42 1.25 -1.2 -0.77 -5.9 -7.02 -9.55 -2.12 2.57 -4.68 -2.46 -3.46 -0.24 -1.16 0.28 0.49 -10.41 - 0.39 2.64 -2.37 -3.28 -1.79 -0.9 -0.26 -2.42 -0.46 1.58 -2.22 -2.75 -0.93 -10.35 1.21
Solyc06g036231.1.1 (Solyc06g036231.1)
1.7 -0.05 - - - 1.46 - - - 2.34 - -1.14 2.06 -0.99 - - -0.67 - - 1.8 2.64 - - -2.26 - 1.83 -1.0 -0.11 -0.85 - - -0.43 - -
Solyc06g036232.1.1 (Solyc06g036232.1)
- - - 0.95 - 0.5 -0.78 - 1.8 - - - 2.52 0.8 - - - - - 1.69 2.46 - - - - 3.23 -0.04 - - - - - - -
Solyc06g036234.1.1 (Solyc06g036234.1)
-1.59 -3.39 -2.11 - -3.7 -1.82 -3.28 - -0.29 - - - 1.91 -0.66 - - - - - 2.96 2.65 - - -6.1 -5.13 3.67 -2.48 -3.15 -2.81 - -2.0 -3.06 - -
Solyc06g036236.1.1 (Solyc06g036236.1)
- - - - -0.4 0.11 -1.78 - -1.31 0.37 - - 2.25 0.13 - - - - - 2.71 3.47 - - -4.03 - 2.47 -1.25 -2.54 -2.37 - -3.28 -2.66 - -
Solyc06g036238.1.1 (Solyc06g036238.1)
-5.0 - -1.67 - -4.03 -1.82 -2.78 - -0.18 0.17 -3.79 -4.42 2.34 1.84 - - - -3.92 - 2.48 2.07 -4.77 - -5.82 -5.32 3.55 -2.09 -2.14 -2.76 -5.12 -4.8 -4.48 - -4.43
Solyc06g048430.3.1 (Solyc06g048430.3)
-1.33 -4.03 -5.12 - -2.75 -2.39 -0.45 -2.74 -1.48 -0.63 -3.64 -3.6 -1.11 -2.32 0.55 0.38 -0.08 -5.22 -5.97 -1.29 4.19 -0.68 -3.1 -1.86 -0.39 -0.18 -1.76 -0.06 0.33 -0.55 -1.08 0.44 -5.67 -1.41
Solyc06g054327.1.1 (Solyc06g054327.1)
-0.17 -2.74 -3.93 -2.47 -0.45 -0.67 0.38 -0.93 -0.74 1.89 -0.51 -1.11 0.36 0.43 1.18 1.53 1.36 1.59 2.21 -0.64 -2.31 -1.06 -1.16 -1.69 -1.6 -1.2 -1.21 -1.21 -1.28 -1.73 -0.83 -0.67 -3.23 -1.62
Solyc06g059830.2.1 (Solyc06g059830.2)
- - - - - - - - - -0.18 - - -1.33 0.12 - - - - - - 4.64 - -1.64 -1.88 - - 1.58 -1.45 - - 1.08 - - -0.65
Solyc06g072845.1.1 (Solyc06g072845.1)
-6.74 - - - -3.5 -3.79 - -5.75 -3.45 -2.75 -5.43 -4.8 -7.7 -5.8 -1.73 -1.12 -1.42 -12.45 - 1.07 -0.77 0.79 -3.58 0.13 1.62 3.41 -3.31 0.49 1.92 0.55 0.23 2.34 -6.35 -6.14
Solyc06g076420.1.1 (Solyc06g076420.1)
-1.31 - -3.87 -5.36 -3.94 -8.53 -2.09 - - -5.68 -7.34 -9.3 - - - - - -8.98 -7.88 -5.23 4.75 -5.18 - -6.4 -4.65 2.35 - -3.63 -0.34 -4.11 -7.94 -3.49 - -7.62
Solyc07g007990.3.1 (Solyc07g007990.3)
0.95 -4.16 2.25 -0.18 -3.7 -2.53 - -3.74 -1.11 1.47 -1.42 -5.43 0.86 -0.3 1.14 0.69 1.23 - - -2.34 2.09 -1.19 -5.18 -2.84 -3.45 -1.97 -0.13 -1.09 -1.81 -0.8 -0.07 0.15 -3.93 1.95
Solyc07g045340.3.1 (Solyc07g045340.3)
-1.16 -0.92 -0.45 -1.29 -2.2 -1.56 -1.26 -1.67 -1.61 -0.02 -0.67 -0.28 0.07 0.04 -0.62 -0.15 -0.31 2.01 2.63 1.36 -0.35 -1.01 -1.25 -1.46 -1.2 2.06 -1.19 -1.29 -0.86 -0.92 -0.87 -0.61 -2.22 -0.81
Solyc08g047880.1.1 (Solyc08g047880.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc08g077870.3.1 (Solyc08g077870.3)
-2.81 - -2.81 - -3.79 -5.54 - -7.92 -1.14 -0.85 -4.63 -9.23 -2.9 -6.28 -1.8 -2.46 -2.83 -6.99 -5.96 -2.07 4.63 -3.15 -3.32 -0.31 0.24 -1.68 -3.34 0.58 0.92 -3.56 -2.72 -1.54 - -1.95
Solyc08g079730.1.1 (Solyc08g079730.1)
0.84 -7.37 -4.79 -8.6 0.57 -1.71 -8.79 -0.9 -1.41 -0.38 -0.95 -2.84 -4.02 -2.84 -3.31 -5.06 -4.44 - - -2.05 3.11 0.62 -2.05 -0.53 -0.64 -1.38 -0.12 0.43 -0.06 1.12 0.99 1.58 -2.07 2.22
Solyc09g007860.3.1 (Solyc09g007860.3)
0.88 0.23 0.49 -0.84 -0.51 -1.7 -2.0 -5.09 -2.52 -0.33 -5.15 -4.35 -1.33 -1.49 -0.84 0.07 -0.49 1.14 0.66 1.45 2.12 -0.96 -3.44 -1.45 -0.91 0.65 -0.09 0.92 1.55 -0.36 -1.01 0.1 -4.8 0.6
Solyc09g011110.1.1 (Solyc09g011110.1)
1.61 - 1.39 - -4.27 -4.81 - - -1.85 -0.86 -6.74 - - - - - - - - 2.98 3.27 -3.74 - -3.79 -5.23 2.52 -6.07 -5.77 -3.2 -5.81 - -2.0 - 1.82
Solyc09g042717.1.1 (Solyc09g042717.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc09g057515.1.1 (Solyc09g057515.1)
- - - - - - - - - - - - -0.24 - - - - -0.78 -0.93 1.14 4.19 - - - - 1.83 0.05 0.82 1.59 -0.36 - 0.55 - -
Solyc09g072873.1.1 (Solyc09g072873.1)
- -2.02 - - -2.72 -4.41 -2.55 -0.67 - 1.05 - - - -3.07 - - -0.32 -2.65 -1.02 3.06 2.32 -3.09 -2.88 -2.66 -0.58 3.61 -1.94 -1.07 -0.45 -1.77 -0.99 -2.16 - -
Solyc09g072877.1.1 (Solyc09g072877.1)
- - - - -0.68 -3.58 - - - 0.43 - - - -4.05 - -0.62 -2.19 1.72 3.98 2.01 0.8 - - -3.26 -2.8 2.45 - - -4.49 - -3.76 -1.6 - -
Solyc09g075210.3.1 (Solyc09g075210.3)
0.02 -1.32 -2.56 -2.84 -1.82 -2.58 -5.51 -5.95 -4.56 -1.32 -4.97 -4.81 -2.66 -2.11 1.74 2.13 1.74 -1.59 -1.11 0.18 2.16 -5.71 -10.81 -5.05 -3.14 3.45 -8.56 -4.11 -1.44 -5.99 -6.52 -2.68 0.19 -0.75
Solyc10g005010.3.1 (Solyc10g005010.3)
2.07 - -3.8 -5.84 1.72 -0.92 -7.3 -1.97 -1.3 -2.24 -7.14 - - - -6.29 - -6.95 -4.27 -4.19 -6.4 2.32 -2.73 -5.39 -5.02 -3.29 -6.64 -6.89 -4.96 -2.22 -3.35 -3.28 -1.18 -3.5 4.21
Solyc10g007030.2.1 (Solyc10g007030.2)
-0.07 -3.1 -0.99 -0.86 -0.82 -0.61 -1.13 -0.84 -1.34 -0.15 -0.51 0.08 0.04 0.17 0.0 0.07 -0.14 -9.13 -10.17 -0.89 0.31 0.96 0.6 0.9 0.67 -0.41 0.5 0.79 0.78 0.9 0.95 0.94 -0.57 -0.37
Solyc10g012100.1.1 (Solyc10g012100.1)
- - - - 1.14 0.29 - - - - - - - - - - - - - - - - - 0.33 -1.58 - - 2.21 4.51 - - - - 0.7
Solyc10g017750.2.1 (Solyc10g017750.2)
- - - - -0.01 1.11 - - - 3.19 - - - - - - - 0.1 - 0.02 4.3 - - - - - - - - - - - - -
Solyc10g081310.2.1 (Solyc10g081310.2)
0.3 0.55 -0.79 -0.01 -1.2 -0.67 -0.08 -0.88 -0.23 0.46 0.22 -0.41 0.13 0.06 -0.3 -0.82 -0.86 -3.85 -4.05 -0.46 -0.24 0.65 0.13 0.28 0.56 0.01 0.48 0.48 0.75 0.65 0.62 1.01 -1.2 -0.19
Solyc11g018710.1.1 (Solyc11g018710.1)
-4.98 - -5.06 -5.31 1.9 -0.96 - -1.0 1.06 0.49 0.59 -0.14 0.0 0.15 -4.14 -4.29 -3.15 - - -0.37 2.93 -0.48 -1.59 -0.66 0.51 -1.55 -0.13 0.83 1.27 0.43 -0.25 0.06 -1.01 -1.81
Solyc11g068630.2.1 (Solyc11g068630.2)
-0.73 - -4.21 - -4.02 -4.13 -5.17 - - - -3.05 -3.64 -4.38 -5.37 - - - - - -3.09 4.96 - - -4.97 -6.11 0.5 - -4.77 -3.01 - - - - -3.96
Solyc11g071360.1.1 (Solyc11g071360.1)
-2.39 - - - 0.36 -2.32 - - - -0.1 0.23 - - -2.93 - - - - - - 4.58 -3.54 - - -1.43 1.46 - - 0.78 - - 0.32 - -4.53
Solyc12g035824.1.1 (Solyc12g035824.1)
- - - - - - - - 4.27 - - - - - - - - - - 3.88 - - - - - - - - - - - - - -
Solyc12g056820.2.1 (Solyc12g056820.2)
- - - - -4.26 -4.01 - - -3.78 -4.02 -5.15 -5.04 2.49 0.98 - - - - - - 4.57 - - -6.31 -5.62 0.94 - -3.05 -2.37 - - -4.62 - -3.49

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.