Heatmap: Cluster_45 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
-0.0 -1.92 -1.19 -0.69 -1.0 0.3 0.87 0.95 0.81 -0.09 -0.2 -0.04 -0.61
-1.67 -4.91 -0.39 -0.26 -0.54 -0.46 0.96 1.13 0.17 0.23 0.43 0.35 -0.76
-0.16 -1.85 -0.22 0.03 -0.18 0.37 0.6 0.72 0.59 -0.16 -0.09 -0.14 -1.44
-0.35 -1.64 -1.22 -0.92 -1.09 0.53 1.06 1.17 1.0 -0.93 -0.99 -1.04 0.23
-0.07 -1.64 -0.39 -0.16 -0.2 0.6 0.76 0.62 0.64 -0.27 -0.31 -0.34 -1.07
-0.19 -2.24 -0.78 -1.03 -1.27 0.71 1.15 1.19 1.04 -0.55 -0.58 -0.55 -2.41
-0.49 -0.54 -0.88 -0.64 -0.69 0.64 0.8 0.97 1.05 -0.64 -0.56 -0.7 -0.91
-0.41 -1.23 -0.45 -0.47 -0.56 0.54 0.82 0.88 0.81 -0.5 -0.56 -0.44 -0.43
-0.26 -1.41 -0.8 -0.94 -0.7 0.51 0.84 0.96 0.73 -0.19 -0.1 -0.19 -0.81
-0.34 -1.85 -1.11 -0.86 -0.85 0.22 0.68 0.87 0.61 0.27 0.39 0.38 -1.23
-0.28 -1.66 -1.03 -0.67 -0.55 0.79 0.89 0.91 0.91 -0.49 -0.48 -0.64 -0.6
-0.59 -0.59 -1.26 -1.38 -0.88 0.58 1.01 1.18 0.76 -0.23 -0.18 -0.25 -1.84
-0.85 -2.71 -0.75 -0.99 -0.72 0.57 0.74 0.68 0.9 0.13 0.34 0.31 -1.47
-0.24 -3.97 -1.55 -1.25 -2.03 1.19 1.33 1.45 1.49 -2.67 -2.56 -2.76 -1.9
-0.4 -1.71 -0.56 -0.61 -0.34 0.2 0.49 0.57 0.63 0.4 0.4 0.34 -1.6
-0.08 -0.97 -1.31 -1.0 -1.02 0.76 0.7 0.77 0.94 -0.21 -0.05 -0.15 -1.11
-0.23 -1.25 -0.45 -0.23 -0.35 0.37 0.57 0.5 0.66 -0.08 -0.06 0.01 -0.59
-0.69 -1.78 -1.23 -1.07 -1.32 0.99 1.3 1.55 1.49 -3.3 -3.34 -3.5 -1.65
-0.18 - 0.67 0.6 0.78 0.52 0.9 1.15 0.32 -7.59 -7.59 -7.56 -0.97
-0.98 -3.21 -0.38 0.15 -0.31 0.81 1.03 1.13 0.92 -0.95 -1.19 -1.18 -1.21
-0.34 -1.29 -0.76 -0.53 -0.77 0.66 0.68 0.63 0.5 0.19 0.08 0.09 -0.9
-0.52 - -0.22 0.32 -0.65 -0.37 1.17 1.62 0.45 -0.71 -1.94 -1.07 -0.45
-1.06 -2.38 -1.58 -0.92 -0.63 0.66 0.81 0.83 1.01 0.25 0.13 0.17 -1.86
-0.56 -1.34 -2.88 -2.11 -2.35 0.98 1.44 1.5 1.38 -1.54 -1.48 -1.48 -2.44
-0.52 -2.57 -0.54 -0.29 -0.2 0.39 0.51 0.52 0.57 0.22 0.25 0.24 -0.8
-0.93 -2.56 -2.09 -1.26 -1.16 0.03 0.74 1.12 0.31 0.53 0.56 0.56 -0.5
0.17 -3.31 -1.38 -0.5 -0.72 0.71 1.31 1.47 0.94 -2.43 -3.25 -2.66 -0.28
-0.44 -9.8 -0.78 -0.5 -0.27 0.2 0.99 1.05 1.1 -0.35 -0.41 -0.43 -0.98
-0.45 -1.4 -0.73 -0.13 -0.54 0.56 0.81 0.76 0.69 -0.23 -0.23 -0.26 -0.71
-0.49 -2.82 -0.97 -1.24 -1.39 0.37 0.73 0.73 0.76 0.24 0.59 0.47 -1.13
-0.03 -3.14 -1.74 -1.32 -1.17 0.85 1.02 0.91 0.69 -0.16 -0.07 -0.23 -0.44
0.04 -1.41 -1.57 -1.72 -1.4 0.61 0.91 1.13 1.06 -0.39 -0.4 -0.43 -0.71
0.34 - - - - -0.1 2.03 2.26 -0.06 - - - -0.04
-0.2 -2.58 -1.13 -0.81 -0.89 0.41 0.78 0.92 0.92 -0.29 -0.17 -0.27 0.06
-0.18 -1.81 -2.89 -2.83 -2.96 0.97 0.9 0.8 1.16 -0.06 -0.11 -0.05 -0.36
-0.37 -2.37 -0.61 -0.72 -0.55 0.41 0.87 0.95 0.85 -0.82 -0.49 -0.54 0.29
-0.82 -2.42 -2.63 -3.33 - 0.65 0.98 1.45 0.57 0.32 0.12 0.71 -1.94
-0.48 -1.42 -1.49 -1.67 -1.47 -0.02 1.11 1.39 1.5 -0.57 -0.46 -0.39 -2.99
0.22 -1.38 -2.59 -2.94 -2.25 0.54 1.27 1.54 1.18 -1.62 -1.28 -1.4 -0.34
-0.39 -1.86 -0.19 -0.01 -0.13 -0.1 0.61 0.79 0.86 -0.28 -0.17 -0.17 -0.78
-0.4 -2.1 -0.82 -0.4 -0.46 0.6 0.94 0.97 0.96 -0.37 -0.49 -0.46 -1.34
-0.3 -1.16 -1.77 -2.49 -1.92 0.83 1.0 1.2 1.34 -0.62 -0.86 -0.32 -1.34
0.11 -2.95 - - - 1.18 1.29 1.66 1.3 - - - 0.53
-0.26 -2.48 -0.22 0.01 -0.11 0.07 0.61 0.74 0.63 -0.18 -0.1 -0.08 -0.65
-0.12 -1.43 -0.85 -1.94 -1.32 1.14 1.38 1.54 1.19 -2.89 -2.99 -2.92 -3.06
-0.54 -4.6 -1.3 -1.96 -0.54 0.95 0.95 1.03 0.48 0.15 0.18 0.14 -1.77
-0.2 -1.5 -1.18 -1.42 -0.67 0.25 0.9 1.24 0.89 -0.15 -0.18 -0.14 -1.44
-0.53 -4.66 -0.29 -0.46 -0.45 0.11 0.81 0.91 1.05 -0.25 -0.01 -0.05 -1.24
-0.37 -2.6 -1.34 -1.21 -0.86 0.61 0.6 0.6 0.74 0.29 0.44 0.4 -0.86
-0.27 -3.58 -0.74 -0.76 -0.87 0.37 0.95 1.08 0.8 -0.55 -0.41 -0.52 0.2
-0.41 -3.0 0.07 0.29 -0.18 0.43 0.63 0.75 0.84 -0.48 -0.48 -0.58 -0.98
-0.37 -3.09 - - - 1.27 1.12 0.85 1.24 -0.15 0.06 -0.03 -1.18
-0.37 -1.19 -0.54 -0.34 -0.37 0.55 0.79 0.81 0.67 -0.52 -0.36 -0.44 -0.35
-0.16 -1.63 -1.12 -1.51 -1.11 0.78 0.81 0.87 0.74 -0.14 -0.02 0.0 -0.64
0.03 -2.01 -0.04 -0.09 0.05 0.01 0.69 0.95 0.14 -0.75 -0.68 -0.6 0.31
-0.46 -2.1 -1.54 -1.26 -1.3 0.2 1.17 1.4 0.97 -0.58 -0.38 -0.39 -0.58
-0.83 -2.19 -0.54 -0.45 -0.78 0.39 0.82 0.88 0.86 -0.14 -0.11 -0.19 -0.38
-0.52 -2.86 -0.28 -0.22 -0.1 0.31 0.72 0.99 0.86 -0.32 -0.22 -0.26 -1.45
-0.11 -1.48 -2.77 -2.75 -2.93 0.67 0.93 1.0 1.08 -0.13 0.0 -0.11 -0.28
-0.81 -1.82 -0.26 -0.08 -0.11 0.24 0.61 0.71 0.88 -0.23 -0.04 -0.11 -1.01
-0.42 -2.98 -0.67 -0.61 -0.77 0.16 1.03 1.44 1.33 -1.25 -0.94 -1.21 -1.03
-0.34 -1.53 -0.1 -0.06 -0.42 0.83 1.03 1.04 0.98 -1.91 -1.82 -1.78 -0.91
-0.27 - -0.07 -0.2 -0.39 -0.25 0.92 1.22 0.3 0.25 -0.01 0.05 -4.05
-0.83 -1.66 -1.23 -1.0 -1.18 0.97 1.11 1.25 1.45 -1.57 -1.38 -1.44 -1.18
-0.54 -3.21 -1.94 -0.79 -1.61 0.81 1.13 1.33 1.35 -1.61 -1.64 -1.91 0.15
-0.49 - -1.24 -1.54 -2.03 0.22 1.05 1.26 0.76 -0.48 -0.22 -0.21 0.59
-0.06 -2.08 -1.05 -0.86 -0.8 0.27 0.91 1.11 0.71 -0.29 -0.22 -0.32 -0.25
-0.38 -0.76 -0.43 0.08 -0.23 0.39 0.91 1.23 0.74 -1.31 -1.33 -1.35 -0.76
-1.07 -10.8 -11.99 -11.65 -13.1 0.53 1.57 2.16 0.95 -1.24 -1.65 -1.42 -0.77
0.35 -1.93 -0.25 -0.89 -0.68 0.12 0.89 1.19 0.35 -0.37 -0.13 -0.35 -1.04
-0.66 -4.39 - -3.99 -3.68 0.15 0.52 0.68 0.61 0.93 0.87 1.1 -0.7
0.05 -7.35 -1.46 -2.11 -1.49 1.07 1.26 1.42 0.85 -0.91 -0.82 -0.45 -2.3
-0.68 -4.8 -0.27 -0.01 -0.13 0.11 0.63 0.77 0.63 -0.13 0.04 -0.06 -0.28
-0.55 -4.62 -0.16 -0.03 0.18 0.23 0.73 0.83 0.94 -0.48 -0.33 -0.37 -1.13
0.07 -1.85 -3.29 -3.29 -3.54 0.65 0.95 1.28 0.8 0.01 0.09 0.02 -0.65
-0.59 -1.39 -1.31 -0.77 -1.18 0.21 1.13 1.41 0.85 -1.01 -1.15 -1.12 0.4
-0.2 -2.95 -0.78 -0.39 -0.64 0.74 1.16 1.15 0.77 -1.32 -1.25 -1.46 -0.0
-0.27 -2.35 -0.34 -0.67 -0.46 0.33 0.6 0.51 0.71 0.01 0.28 0.13 -0.57
0.07 - - - - 1.83 1.68 1.25 1.49 - - - -
-0.32 -3.12 -1.21 -0.95 -0.99 0.46 1.0 1.1 1.22 -0.94 -0.73 -0.8 0.15
-0.22 -0.96 -1.16 -0.69 -0.58 0.3 1.0 1.29 0.89 -1.01 -0.96 -0.89 -0.28
-0.67 -3.17 -0.45 -0.56 -0.25 -0.26 0.47 0.7 0.2 0.32 0.59 0.6 -0.4
-0.13 -1.39 -1.98 -1.34 -1.59 0.43 0.96 1.09 0.85 -0.18 -0.09 -0.16 -0.34
0.2 -2.38 -2.69 -2.16 -2.03 1.22 1.51 1.73 1.02 - - - -1.02
-0.3 -1.65 -0.57 -0.62 -0.51 0.49 0.87 0.85 0.77 -0.48 -0.31 -0.36 -0.32
-0.93 -10.53 - - - 0.02 1.0 1.32 0.23 0.7 0.61 0.59 0.16
-0.37 -1.86 -2.17 -0.98 -0.89 0.97 1.19 1.33 0.98 -0.73 -0.79 -0.5 -4.25
0.16 -1.0 -1.63 -1.35 -1.09 0.83 1.25 1.3 0.94 -1.38 -1.48 -1.35 -0.93
-0.43 -2.23 -0.71 -1.01 -1.08 0.37 0.68 0.9 0.68 0.13 0.24 0.15 -0.47
-0.18 -0.95 -5.21 -6.89 -3.61 0.78 1.45 1.94 1.6 -7.06 -7.12 -8.08 -2.54
-0.57 -3.03 -1.63 -1.27 -1.56 0.78 1.01 0.92 0.92 -0.14 0.01 -0.07 -0.4
-0.28 -3.85 -0.98 -1.48 -1.36 1.12 1.36 1.41 1.52 -2.72 -2.72 -2.83 -2.95
-0.07 -3.02 -1.24 -1.46 -1.41 0.72 1.42 1.93 1.15 -3.29 -3.12 -2.76 -4.53
0.18 -3.21 -1.87 -1.88 -1.51 0.7 1.07 1.12 1.0 -0.23 -0.09 -0.43 -1.25
-0.78 -4.94 -1.85 -1.42 -1.67 0.79 1.35 1.71 1.07 -1.17 -1.03 -1.23 -1.29
-0.55 -2.53 -0.58 -0.09 -0.48 0.87 1.07 1.08 1.01 -0.88 -0.9 -1.01 -2.46
-0.09 -1.85 -0.38 -0.59 -0.62 0.46 0.68 0.6 0.5 -0.08 -0.04 -0.08 -0.1
0.01 -2.24 -0.69 -0.51 -0.72 0.17 1.04 1.26 0.71 -0.76 -0.59 -0.65 -0.41
-0.2 -3.6 0.76 -0.18 0.24 0.47 1.01 1.36 0.6 -2.35 -2.4 -2.17 -2.21
0.07 -1.2 -0.95 -0.71 -0.68 0.54 0.83 0.83 0.78 -0.34 -0.33 -0.23 -0.75
-0.3 -0.79 -1.02 -1.18 -0.97 0.65 0.72 0.75 0.88 -0.2 -0.21 -0.11 -0.37
0.2 -1.85 -0.58 -0.61 -0.02 0.2 0.71 0.92 -0.28 -0.06 -0.13 -0.03 -0.14
-0.19 -3.68 -0.22 -0.52 -0.25 0.34 1.22 1.31 0.97 -2.13 -2.17 -1.71 -0.19
-2.13 - -6.21 - - 0.84 1.6 2.19 1.43 -2.48 -2.32 -2.6 -2.81
-2.04 -2.7 -2.25 -1.74 -1.09 0.94 1.52 1.46 1.85 -3.1 -2.93 -2.8 -3.51
-0.12 -3.37 -0.53 -0.3 -0.55 0.6 0.72 0.72 0.74 -0.41 -0.35 -0.33 -0.03
0.11 -4.31 0.03 0.58 0.23 0.3 1.18 1.55 0.13 - -6.32 -7.47 -0.65
-0.29 -0.59 -1.89 -1.58 -1.47 0.55 0.9 1.2 1.02 -0.64 -0.61 -0.56 -0.11
-0.29 -2.31 -1.42 -1.03 -0.94 0.25 0.86 1.08 1.04 -0.24 -0.07 -0.05 -0.6
-0.39 -2.59 -5.09 - - 0.26 0.64 0.72 -0.53 1.24 1.2 1.05 -2.14
-0.04 -1.19 - - - 0.88 1.49 1.76 1.34 -2.49 -2.98 -2.51 -0.9
-0.75 -5.55 -0.79 -0.52 -0.87 1.04 1.16 1.12 1.07 -1.58 -1.37 -1.4 -0.14
0.14 -5.95 0.59 -0.16 -0.12 0.38 0.85 1.16 0.69 -1.83 -1.77 -2.31 -0.27
-1.04 - -1.08 -0.63 -0.78 1.3 1.42 1.6 1.05 -3.1 -2.59 -2.69 -2.83
-1.45 - -1.32 -1.88 -0.87 -0.29 1.18 1.62 -0.58 0.62 0.66 0.41 -2.81
-0.58 -3.04 -0.73 -0.11 -0.5 0.46 0.95 1.03 0.82 -0.48 -0.17 -0.3 -1.18
-0.83 -4.79 - - - 0.54 1.82 2.32 1.09 -8.98 -8.04 - -1.78
-0.09 -2.12 -1.14 -0.49 -0.66 0.48 0.82 0.96 0.71 -0.37 -0.41 -0.41 0.01
-1.15 - -0.55 -0.78 -0.41 -0.2 1.6 1.88 0.22 -1.51 -1.49 -1.72 -0.36
0.03 -1.14 -1.05 -0.91 -1.13 0.39 1.0 1.2 1.17 -0.91 -0.55 -0.69 -1.43
0.02 -3.76 -0.37 -0.22 -0.43 0.66 0.81 0.67 0.89 -0.64 -0.43 -0.37 -0.71
-0.54 -4.55 -1.25 -0.96 -0.75 0.51 1.19 1.09 1.22 -0.37 -0.16 -0.31 -3.49
-0.2 -4.23 - - - 0.41 1.65 2.0 0.76 -1.36 -0.27 -2.23 -1.04
-0.77 -3.5 -0.82 -0.67 -0.43 0.33 0.79 0.9 0.87 0.15 0.19 0.21 -1.79
-0.18 -1.2 -1.17 -0.42 -0.77 0.7 1.11 1.1 0.84 -0.73 -0.6 -0.76 -1.62
-1.25 -0.89 - - - 0.92 1.11 1.83 0.79 -0.44 -0.18 -0.01 -3.49
-0.29 -2.06 -1.23 -1.13 -1.08 0.77 0.89 0.91 1.07 -0.12 -0.04 0.01 -2.71
-0.23 -6.22 -0.32 0.04 -0.09 0.74 0.93 1.09 0.89 -3.61 -2.4 -3.17 0.51
-0.78 -2.76 -3.77 -3.04 -3.15 0.75 1.21 1.38 0.69 -0.15 -0.04 -0.08 -0.09
-1.4 -4.95 -0.24 0.43 0.2 -0.33 1.06 1.24 -0.31 0.14 -0.08 0.03 -2.99
-0.45 -5.94 -1.38 -1.18 -1.13 0.5 1.07 1.22 0.15 0.12 0.06 0.02 -0.17
-0.25 -3.35 -1.4 -0.08 -1.07 -0.27 1.16 1.73 0.64 -0.74 -0.94 -0.76 -0.72
-0.97 -6.5 -0.02 -0.23 -0.19 0.26 0.4 0.61 0.41 0.03 -0.01 0.26 0.26
-0.13 -32.58 0.26 -0.33 -0.02 0.54 1.24 1.67 0.63 -6.85 - - -0.87
-1.15 -4.77 -0.82 -0.08 -0.26 0.0 0.51 0.79 -0.1 0.58 0.49 0.25 -0.01
-1.13 -8.46 -1.97 -1.79 -1.94 0.55 0.71 0.79 0.77 0.53 0.53 0.57 -0.26
-0.21 -6.21 -4.55 -4.59 -5.37 0.75 1.61 2.23 1.23 - -4.69 - -2.25
-0.62 -8.68 -2.06 -4.54 -2.07 0.3 1.61 1.7 2.02 -2.68 -4.02 -4.97 -
0.42 -6.72 -1.66 -1.23 -1.34 0.78 1.16 1.07 0.8 -0.61 -0.48 -0.2 -1.11
-0.3 -4.69 -0.68 -0.33 -0.34 0.35 0.9 0.93 0.85 -0.15 0.04 -0.04 -2.42
-0.41 -8.05 - - - 1.13 1.54 1.8 0.74 -0.94 -0.8 -1.04 -1.31
-0.76 -3.45 - - - 1.42 1.41 1.24 1.31 -0.44 -1.1 -0.88 -1.4
-1.15 -5.0 -8.83 -10.17 -9.28 -0.71 1.1 1.73 0.43 0.29 0.24 0.28 0.55
-0.42 -4.23 -0.83 -0.32 -0.7 -0.01 0.53 0.79 0.14 0.6 0.61 0.43 -0.79
-0.34 -3.73 -1.24 -0.47 -1.65 0.65 0.87 1.08 0.52 -0.04 -0.15 -0.11 -0.11
-0.65 -7.55 -0.33 0.68 0.16 0.13 1.13 1.68 0.28 -1.86 -1.74 -1.48 -2.3
-0.52 -1.45 - - - 1.52 1.58 1.54 1.63 - - - -3.65
0.16 -10.28 -4.41 - - 0.17 1.47 1.76 0.57 -0.77 -1.04 -1.0 0.58
-0.19 -7.96 -2.41 -3.27 -2.14 0.1 0.61 0.87 -0.72 1.05 0.99 1.06 -1.23
-1.03 -7.05 0.16 0.15 -0.2 -1.23 0.94 1.27 0.16 0.07 0.06 0.18 -1.7
-0.22 -4.77 -0.1 0.71 -0.6 -0.09 1.38 1.41 1.06 - - - -0.7
-0.32 -2.4 -0.66 -0.68 0.22 0.35 0.3 0.59 0.98 -0.09 -0.32 0.04 -0.27
-0.65 - -0.59 -0.43 -0.7 0.56 0.55 0.57 0.72 -0.01 0.09 0.07 0.22
-0.02 -6.5 - - - 0.5 0.81 0.98 0.69 0.77 0.58 0.61 -0.94
-0.38 -6.39 -4.2 - - 0.76 0.83 0.52 0.74 0.67 0.79 0.65 -0.52
-0.15 -1.65 - - - 0.28 1.5 1.77 0.86 -0.46 -0.86 -0.51 -0.91
0.07 - - - - 1.83 1.68 1.25 1.49 - - - -
-0.64 - -0.26 -0.73 -1.02 0.9 1.14 1.67 1.04 -1.59 -1.56 -1.54 -3.21
-0.09 -2.06 -0.72 -0.73 -0.67 0.3 0.87 1.24 0.51 -0.22 -0.19 -0.18 -0.95
-0.59 - - -5.55 - 0.84 1.06 1.48 0.64 -0.07 0.22 -0.04 0.03
-1.87 -6.83 -0.28 0.18 0.33 -0.23 0.32 0.73 0.34 0.36 0.67 0.41 -1.87

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.