Heatmap: Cluster_78 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
0.57 -1.3 -0.51 -0.45 -0.28 -0.53 -0.3 -0.07 -0.6 0.92 0.75 0.87 -1.6
0.41 -0.7 -1.16 -0.4 -1.5 -0.39 -0.45 -0.03 -0.45 0.78 0.59 1.17 -0.28
0.35 -1.94 -2.26 -1.79 -1.34 -0.35 -0.08 0.19 -0.4 1.09 1.12 1.23 -1.73
0.03 -0.79 -2.04 -1.45 -1.6 -0.32 -0.04 -0.02 -0.05 1.07 1.02 0.99 -0.71
-0.07 -0.68 -1.09 -0.94 -0.6 -0.12 -0.03 -0.05 -0.01 0.89 0.88 0.84 -1.27
0.08 -0.28 -2.59 -1.28 -1.44 -0.22 0.14 0.08 -0.04 1.02 0.91 1.0 -1.81
0.15 -1.38 -0.65 -0.29 0.01 -0.56 -0.35 -0.4 0.03 0.84 0.95 0.86 -1.83
-0.03 -0.85 -0.4 -0.46 -0.74 -0.46 -0.24 -0.33 -0.16 0.83 0.95 0.86 -0.77
0.26 -1.62 -1.23 -1.01 -0.8 0.13 -0.09 -0.34 0.7 0.69 0.64 0.74 -0.53
-0.22 -0.4 -1.96 -0.91 -1.39 -0.22 -0.23 -0.32 -0.2 1.06 0.9 1.03 -0.24
-0.05 -1.07 -0.95 -0.85 -0.99 -0.37 0.04 0.21 0.03 0.91 0.86 0.96 -1.47
0.37 -3.68 -1.54 -0.37 -0.4 -0.33 0.01 0.1 -0.55 1.18 0.85 1.01 -3.04
-0.16 -1.23 -1.93 -2.08 -1.81 -0.0 -0.17 -0.32 0.15 0.98 0.96 1.04 0.16
0.21 -2.43 -6.24 -6.69 -4.89 0.04 -0.06 -0.34 0.39 1.17 1.05 1.18 -0.13
0.19 -0.62 -1.0 -0.64 0.05 -0.16 -0.36 -0.11 -0.62 1.0 0.48 1.06 -1.68
0.03 -0.53 -0.88 -0.84 -0.56 0.15 0.14 0.14 0.35 0.51 0.4 0.59 -0.57
0.19 -1.65 -1.35 -1.55 -1.05 -0.37 -0.03 0.21 0.2 1.0 0.83 0.97 -0.91
0.16 -1.04 -0.47 -0.64 -0.18 0.08 -0.25 -0.4 -0.09 0.72 0.73 0.74 -0.79
-0.04 -1.19 -1.81 -0.77 -1.81 -1.29 -0.06 -0.11 -0.64 1.3 1.19 1.15 -0.95
0.4 -2.0 -2.46 -2.91 -2.57 -0.13 -0.13 -0.08 -0.61 1.28 1.07 1.35 -1.21
0.35 -3.35 -0.5 -0.18 0.09 -0.4 -0.4 -0.51 -0.26 1.03 0.81 0.91 -1.96
0.15 -1.73 -0.79 -0.65 -0.53 -0.27 -0.1 -0.1 0.12 0.72 0.86 0.73 -0.39
0.2 -1.11 -1.24 -0.21 -0.47 -0.62 -0.29 -0.14 -0.2 1.05 0.63 1.05 -1.18
0.17 -0.73 -0.75 -0.17 -0.09 -0.14 -0.08 -0.11 -0.45 0.76 0.73 0.68 -1.38
0.33 -1.01 -0.88 -0.6 -0.56 -0.62 -0.59 -0.47 -0.78 0.87 1.01 1.06 -0.28
0.32 -0.88 -1.23 -1.06 -0.93 -0.8 -0.08 -0.29 -0.99 1.14 0.87 1.24 -0.9
0.18 -0.8 -0.49 -0.37 -0.15 -0.3 -0.27 -0.41 0.05 0.69 0.7 0.78 -0.92
0.08 -1.29 -1.17 -0.85 -0.46 0.34 0.31 0.36 0.4 0.44 0.47 0.56 -1.09
0.28 -3.17 -0.81 -1.05 -0.78 0.2 0.34 0.29 0.15 0.6 0.52 0.66 -0.38
0.13 -0.91 -1.03 -0.19 -0.13 -0.15 0.05 -0.08 -0.06 0.78 0.5 0.74 -1.2
-0.05 -1.14 -1.17 -0.08 -0.64 -0.12 -0.12 -0.06 0.08 0.67 0.84 0.73 -0.65
0.43 -1.51 -1.35 -1.39 -1.16 -0.81 -0.11 0.12 -0.36 0.99 0.84 1.07 -0.27
0.2 -2.24 -1.11 -0.5 -0.41 -0.28 -0.24 -0.17 -0.13 0.96 0.81 1.04 -1.05
0.03 -1.16 -0.7 -0.04 -0.27 -0.25 -0.22 -0.09 -0.19 0.83 0.33 0.86 -0.42
0.37 -0.97 -1.25 -0.83 -1.04 -1.0 -0.45 -0.27 -0.69 1.14 1.07 1.04 -0.55
0.28 -1.49 -0.95 -0.39 -0.45 0.15 0.02 0.06 0.31 0.59 0.38 0.47 -0.29
0.01 -0.38 -0.56 -0.25 -0.25 -0.13 -0.15 -0.2 -0.13 0.51 0.55 0.61 -0.23
0.43 -2.18 -8.0 -6.26 -5.24 -0.32 0.07 0.17 0.1 1.26 1.2 1.24 -1.81
0.45 -4.43 -2.06 -1.81 -1.97 -0.21 -0.12 -0.12 0.21 0.94 0.83 0.98 0.34
0.17 -3.48 -0.81 -0.15 -0.41 -0.49 -0.33 -0.2 -0.96 1.02 0.78 1.09 -0.36
0.5 -2.29 -1.44 -0.51 -0.52 0.35 0.42 0.15 0.01 0.56 0.49 0.55 -0.89
0.38 -2.2 -0.8 -0.17 -0.25 -0.1 0.09 -0.06 0.08 0.73 0.54 0.67 -1.18
0.18 -1.25 -0.85 -0.59 -0.08 -0.19 -0.23 -0.42 -0.66 0.97 1.02 0.9 -1.68
0.09 -0.77 -0.22 -0.19 0.22 -0.18 -0.26 -0.53 0.04 0.66 0.53 0.7 -1.45
0.57 -1.41 -1.19 -1.15 -0.59 0.13 0.08 0.08 -0.23 0.74 0.54 0.71 -0.4
0.19 -1.58 -1.52 -0.74 -0.7 -0.22 -0.01 -0.09 0.1 0.92 0.86 0.96 -1.19

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.