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Heatmap: Cluster_36 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
-0.66 - - - - - - - - 1.26 2.24 2.4 -
-0.91 - - - 2.57 - 1.1 - - - - 2.13 -
- - - - - - - - - - 3.7 - -
- - - - - - - - - 3.7 - - -
-1.48 -0.13 1.94 - 0.93 - - - 0.16 0.5 0.44 1.08 -
-0.64 - - - - - - - 1.34 1.65 -0.94 2.62 -
- - 2.92 - - - - - - - - 2.44 -
-1.76 - - 1.28 0.23 - -0.81 -0.81 - 0.85 1.35 1.85 -
- - - - - - - - 2.51 - 1.84 1.9 -
- - - - - - - - - 3.7 - - -
- - - - 0.88 - 0.49 0.24 1.92 - 1.24 1.28 -
- - - - 0.88 - 0.49 0.24 1.92 - 1.24 1.28 -
- - - - - - - - 3.7 - - - -
-3.04 -4.57 - - - - -2.86 - -1.58 2.22 - 2.95 -
-3.04 -4.57 - - - - -2.86 - -1.58 2.22 - 2.95 -
-3.04 -4.57 - - - - -2.86 - -1.58 2.22 - 2.95 -
- - - - - - - - - - - 3.7 -
- - - - - - - - - - - 3.7 -
- - - - - - - - - 3.7 - - -
-0.07 0.25 - - - - - - - 2.19 -0.2 2.44 -
- - - - - - - - - 2.69 - 2.71 -
- - - - - - - 0.67 - 0.69 0.66 3.04 -
-1.54 - - - - 1.06 - - - - 3.2 0.46 -
- - - - - - - - 3.7 - - - -
-1.67 -1.82 - - - - -1.07 -1.31 - 1.9 1.87 2.05 -
- - - - 0.74 - 0.97 - - - 2.63 1.67 -
-1.93 -0.45 - - - - 0.85 0.06 2.31 0.07 0.04 1.1 -
- - - - - - - - 3.7 - - - -
-1.25 -3.47 -0.46 1.86 -1.65 -0.8 -1.23 - -0.87 -0.4 0.6 2.0 -
-2.32 - - - - - - - - - 2.54 2.8 -
-0.97 1.57 - - - - - -0.02 0.55 -0.09 2.37 -0.06 -
-2.27 -0.36 - - - - - -0.33 - 1.22 2.0 2.29 -
- - - - - - - - - 1.43 1.33 2.96 -
-2.49 -1.35 - - - -1.39 -0.3 -2.03 - 1.89 1.32 2.26 -
- - - - - - - - - - - 3.7 -
- - - - - - - - - 3.7 - - -
- - - - - - - - 3.7 - - - -
- - - - - - 1.48 - - 3.35 - - -
- - - - - - - - 3.7 - - - -
0.37 - - - - - - 1.47 - 2.33 1.34 0.45 -
-0.66 - - - - - -0.92 - - 2.28 0.24 2.53 -
- - - - - - - 2.68 - - - 2.72 -
- - - - - - - - - - 3.7 - -
0.23 - - - - - 1.3 - - 2.25 - 2.2 -
- - - - 1.95 - - - 2.02 1.33 - 1.36 -
-1.85 - - - - - - - - 2.1 1.06 2.67 -
0.6 0.14 -19.26 -15.26 -9.02 0.95 0.05 -0.35 -0.13 1.27 -1.55 1.11 -0.3
-3.85 - - 1.61 - - - - - -10.71 1.31 2.89 -7.01
-2.02 - - - - 0.6 -0.7 - 2.94 0.04 0.96 - -
-0.64 - - - - - - - 1.34 1.65 -0.94 2.62 -
- 0.5 - - - - 0.81 - - 1.69 - 2.72 -
1.3 - - - - 0.24 -0.53 - 0.62 -0.21 0.75 2.2 -
- - - - - - - - - - 3.7 - -
0.08 -0.14 - 1.36 1.27 - -1.1 - - - 0.89 1.9 -
0.07 -1.04 -0.01 -6.65 -0.05 -0.77 -0.48 -0.23 -0.17 -3.51 -14.08 2.49 -0.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.