Heatmap: Cluster_568 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc02g073574.1.1 (Solyc02g073574.1)
-0.07 -0.8 -2.0 -3.08 -0.09 -0.53 1.55 -0.81 -0.21 0.25 0.52 -0.61 1.19 0.76 -0.52 -0.23 -0.53 - - -1.67 -0.89 0.35 0.66 0.56 0.22 0.75 0.75 0.64 0.13 0.34 0.46 -0.2 -3.63 -0.63
Solyc02g084450.3.1 (Solyc02g084450.3)
-0.8 -0.69 -2.06 -3.96 -0.93 -1.02 1.55 -0.61 0.11 0.69 0.12 -0.85 1.16 0.31 0.03 -0.37 -0.45 - - -1.43 -0.83 0.45 1.02 0.63 0.3 0.38 1.05 0.67 0.16 0.43 0.44 0.1 -3.51 -0.95

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.