Heatmap: Cluster_440 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc06g072650.1.1 (Solyc06g072650.1)
3.31 -6.19 2.94 -1.91 -0.95 -0.71 - -5.55 -5.79 -4.0 -6.17 -8.17 -2.21 -2.65 -2.99 -7.3 -7.01 - - 0.66 -1.56 - -10.41 -10.47 -9.37 1.82 -11.03 -9.22 -7.76 - -10.92 -6.34 -4.71 3.14
Solyc07g005920.2.1 (Solyc07g005920.2)
2.42 - 4.2 -1.8 - -2.22 - - -3.53 0.37 -3.27 -4.82 - - -0.59 - -4.82 - - - -3.23 - - - - -2.31 - - - - - - - 2.86

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.