Heatmap: Cluster_35 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- - - 2.48 -0.49 - - - - -0.12 - - - - -2.26 5.06 1.49 1.49 - - - - - 0.74 - - - - - - - - - - - - - - - - - - - - - - - -
- - -0.5 0.52 2.05 0.85 - - 2.92 -1.38 - - - - -3.93 4.55 0.35 - - - - - - 1.67 0.39 1.43 - - - - - - - - - - - - - - - - - - - - - -
- 2.05 - 1.61 - - - - 2.38 - - - - - -3.21 4.85 2.12 - - - - - - - - 1.19 - - - - - - - - - - - - - - - - - - - - - -
- 2.49 1.5 -0.65 - - - - - - - - - - - 5.15 1.41 -0.35 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -1.41 -1.32 - - 0.67 -24.43 2.16 -0.41 - - -25.62 - - - 5.13 0.31 -1.31 - - - - - -0.44 - 0.46 - - -0.52 -2.4 - - - - - - - - - - - - - - - - - -0.55
0.32 -3.58 -0.45 -2.1 -1.84 0.09 -0.85 -3.35 0.21 - -3.04 -2.79 -4.17 -4.95 -4.39 5.08 -1.57 -3.73 - -3.51 -3.13 -0.32 -3.15 -4.92 -4.07 -0.96 -4.96 -5.81 0.13 -1.11 -6.58 -2.64 -0.77 -0.56 -1.46 - -5.27 -1.02 -1.04 -3.25 -5.58 - -2.63 -5.25 -0.94 -0.69 -4.06 -1.6
2.55 -0.14 0.18 -1.59 - -0.38 -0.37 -0.59 0.32 - -8.08 -4.25 -2.95 -1.18 -4.59 4.84 -0.91 - -3.27 -0.97 -0.02 -0.4 -3.99 - - -0.59 - - 0.83 -2.17 - - - -2.52 - - - - -4.61 - -0.73 -1.35 -3.9 - - - - -2.48
- -2.61 - - - - - - - - - - - - - 5.5 0.29 -3.61 - - - - - -2.45 - 0.06 - - - - - - - - - - - - - - - - - - - - - -
- - -0.07 - -0.63 1.59 2.1 -0.09 -2.8 -1.61 -1.36 -0.98 -4.01 -3.41 -1.67 4.09 -0.16 -0.57 - -3.14 -1.02 -2.36 - -2.58 - -0.35 - 1.44 1.0 0.09 -1.34 -2.23 -1.14 1.85 -0.51 -0.84 -1.59 -1.14 -2.03 -1.11 - -3.53 -1.69 -0.55 -1.84 -1.72 -1.12 -0.75
- -3.39 - - 0.66 1.12 0.02 -1.62 - -1.23 -0.8 -1.68 1.57 -0.22 -0.85 4.71 -1.2 -0.48 0.01 -0.86 -2.65 -2.11 -0.67 -2.45 -0.22 -2.81 -3.4 -2.54 -3.79 -3.49 -0.59 -1.87 -0.89 - - -3.47 -0.83 -0.61 -1.69 -2.85 - -3.4 -1.45 -1.17 -1.15 -0.9 -1.13 -3.45
0.29 0.07 -0.9 -4.01 1.81 0.44 0.38 0.53 0.08 0.9 -6.64 -7.94 0.0 -1.22 0.21 3.58 -0.27 0.74 0.89 1.78 1.31 1.38 -2.44 -6.0 -2.85 -6.05 - -9.76 -10.45 -4.71 -2.55 -10.06 -6.11 - -10.21 - - 0.45 -4.84 -0.54 -8.53 -2.43 1.15 -0.5 -3.83 0.25 -3.59 -
- - 1.81 1.4 -1.54 -2.16 -1.3 -1.77 - - - - - - - 5.22 0.87 - - - - - - - - 0.51 - - - -4.89 - - - - - - - - - - - - - - - - - -
- - -0.71 - - - - - - - - - - - - 5.48 - - - - - - - - - 1.48 - - - - - - - - - - - - - - - - - - - - - -
- - -0.83 0.8 -1.88 0.31 2.5 2.6 1.59 -2.98 -2.73 - 0.23 -2.58 -3.31 4.11 0.24 1.01 - -0.3 0.49 0.58 - -0.31 - -1.66 - -1.01 -2.1 -1.9 -3.88 -1.96 -2.74 - - - - -2.68 -2.19 -2.96 - - - -1.42 - - - -2.82
0.94 - - - -0.46 2.0 1.38 2.92 - -2.62 - - - -2.85 -2.38 4.77 0.12 -0.5 - - -2.07 -2.0 -3.69 -4.6 -2.62 -1.5 -1.75 - - - - - - - - - - -3.43 - - - - -4.22 - - - - -
- 1.75 0.79 - - - - - 2.26 - - - - - - 4.89 2.32 - - - - - - - - 1.76 - - - - - - - - - - - - - - - - - - - - - -
- - -0.35 -0.5 - - - - 3.02 - - - - - - 4.91 2.2 -1.93 - - - - - - - 1.79 - - - - - - - - - - - - - - - - - - - - - -
- - 0.97 1.34 - - - - - - - - - - -4.03 5.34 -0.93 -1.61 - - - - - - - 1.0 - - - - - - - - - - - - - - - - - - - - - -
- -1.9 -1.18 2.11 -1.92 -2.2 -1.96 - 0.65 -1.58 1.52 1.5 -2.05 - -2.49 4.0 -0.22 1.11 - -0.47 1.15 - 1.3 1.67 -0.33 0.2 -1.21 -0.83 -1.04 -1.6 -3.59 -0.48 -1.91 - -2.88 - -2.91 - - -1.71 - -2.83 - -1.08 -3.42 - -1.29 -3.71
2.61 - 1.59 -0.53 - - - - - - - - - - -3.06 4.77 1.67 1.64 - - - - - - - 2.15 - - - - - - - - - - - - - - - - - - - - - -
-0.99 - -0.15 -2.54 -1.77 0.75 -2.1 0.73 2.78 -1.06 -1.29 0.06 -4.23 -2.7 -3.67 4.37 -1.54 -3.08 - -2.49 - -2.05 - -1.54 -3.7 -1.58 - -2.07 - -1.05 -0.96 -2.4 -0.51 -1.89 - -1.56 0.21 0.75 -3.24 0.08 -0.61 -2.66 -1.19 -1.01 -1.19 0.79 -1.56 -3.12
- 1.06 - 1.56 - - - - - - - - - - - 5.19 2.7 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - -0.7 0.07 -2.17 - - - - - - - - - -2.7 5.29 1.47 - - - - - - - - 1.99 - - - - - - - - - - - - - - - - - - - - - -
- 1.24 -0.44 -0.19 -0.42 -1.28 0.89 - - -1.08 -0.37 -0.02 - -1.45 -0.9 4.59 1.51 - - - - - - -0.91 -1.09 1.37 -0.86 - -0.74 -2.03 -2.05 - -2.92 -1.08 -0.64 - -1.99 -0.32 -0.22 -2.13 - -1.87 - - -2.28 - -0.84 0.37
- - 1.22 - 0.97 2.33 2.04 2.99 -3.56 -2.19 - - -3.04 -4.17 -1.89 4.21 0.48 - 1.86 -0.77 -0.89 -1.92 - - - -1.98 - - - -4.44 -3.16 - - - - - - -2.67 - - - - -2.72 -4.74 - -2.89 -4.26 -5.84
-0.93 -3.54 -2.26 -6.81 -0.63 -1.87 -2.02 -2.32 -0.79 -4.97 -11.3 -11.06 -4.63 -5.74 -4.1 5.49 -10.26 - -4.91 -11.23 - - -7.51 - -10.27 -11.66 -12.65 - - -8.46 -6.55 -9.26 -10.57 - - - - -5.6 -11.7 -6.02 - -7.92 -4.42 -5.83 -8.34 -5.98 -6.1 -13.64
- - -0.01 0.83 - - 1.45 - 1.06 - - - - - - 4.75 3.36 - - - - - - - - 1.2 -0.69 - - -1.93 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 5.17 1.95 - - - - - - - - 3.04 - - - - - - - - - - - - - - - - - - - - - -
- 1.32 1.95 -2.4 0.02 1.21 1.6 1.16 1.23 - -4.2 - - - -5.94 4.31 0.57 1.36 - -1.7 -0.36 -0.29 0.41 -0.59 -0.39 -0.95 -0.93 -3.92 - -6.05 - -4.22 -5.08 - - - - -4.2 -3.53 -2.28 -3.69 - - -2.1 - -4.22 - -
- - 0.68 1.12 - - - - 3.23 - - - - - - 4.91 1.28 1.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.37 -3.05 -6.0 -3.98 1.66 1.24 1.03 0.81 -0.1 -1.84 -5.43 -5.52 -1.46 -2.45 -1.53 4.21 1.27 -5.58 2.43 2.23 -0.1 -2.19 -0.47 -5.15 -2.3 -3.94 -4.55 -7.52 -7.01 -4.84 -3.1 -5.44 -6.63 - -8.27 -8.86 - -3.03 -7.39 -2.39 -6.56 -3.51 -0.24 -2.7 -4.55 -2.9 -4.98 -10.63
1.22 -4.39 -0.56 0.57 -1.26 -0.2 1.29 0.02 -0.77 -2.18 -0.18 0.04 -1.14 -2.35 -1.02 4.13 -0.23 0.75 0.69 -0.65 0.35 1.14 -0.03 -0.95 -0.78 0.94 -1.46 -1.63 -1.06 -1.63 -2.41 -3.59 -3.45 -2.99 -3.49 -3.47 -3.16 -1.62 - -2.68 -1.48 -0.94 -2.32 -1.82 -2.64 -1.28 -3.37 -1.95
-1.04 0.37 1.85 -2.42 0.23 1.66 2.26 2.68 1.91 -1.2 - - -1.97 -2.33 -5.02 4.02 0.35 0.25 -1.73 -1.22 -1.06 -1.79 -2.09 -4.25 -2.8 -0.97 - - - -6.57 -5.77 - - -6.9 - -5.46 -5.36 -1.15 - -6.35 - - -4.79 -4.33 - -1.21 -4.66 -
-0.63 - -5.5 -2.48 2.49 2.42 2.13 2.74 -0.07 -0.37 - - -1.59 -3.19 -0.35 4.13 - -3.08 -2.66 -0.56 -1.36 -3.06 - - -4.62 -4.82 -4.74 -4.64 -1.17 -2.53 -1.64 -3.05 -1.94 -4.14 -5.09 -4.34 -2.82 -2.87 - -2.3 -4.41 - -2.24 -3.24 -3.15 -1.77 -3.13 -2.31
- - 0.54 1.67 -1.74 -0.28 -0.63 - -1.33 -1.14 1.19 0.77 -1.2 -0.86 -1.82 4.39 0.53 1.16 0.22 -0.35 -0.47 0.34 - -1.59 -0.43 0.85 -1.12 -2.43 -2.42 -3.84 -4.32 -2.94 -4.73 - - - - -0.62 - -0.78 -2.79 -1.92 -2.1 -4.13 -2.27 -2.87 -1.57 -1.67
- - - - - - - - - - - - - - - 5.19 3.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.31 1.34 -0.66 - - - - - - - - - - -6.27 4.74 2.31 0.46 - - - - - - -2.57 3.16 - - - -3.01 - - - - - - - - - - - - - - - - - -
-1.09 -0.98 1.02 1.35 -0.91 - -0.4 -2.05 -2.0 -3.28 - - - - -3.84 4.98 1.7 -0.09 - - - - -0.67 -0.3 -1.27 1.43 - - - -3.92 - - - - - - - - - - - - - - - -2.24 - -
- -0.97 -2.71 -2.62 - - - - - - - - - - -4.7 5.39 1.19 -1.28 - - - - - -2.16 - 1.17 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 5.07 3.43 - - - - - - - - 1.85 - - - - - - - - - - - - - - - - - - - - - -
- - -2.04 - -1.54 -0.82 - -1.11 - -3.64 -0.2 -0.41 - - -7.2 5.14 - - - - - - -1.03 0.33 -1.63 0.56 -1.32 0.08 0.24 -2.38 -2.05 - -4.44 - - -0.79 - -1.2 -0.76 -2.67 - - - - - -0.66 -2.38 -1.84
-0.11 -0.73 1.59 0.12 -0.63 - - - -1.56 - - - - - - 4.87 2.44 0.46 - 0.56 - - - -1.2 - 1.82 - - - - - - - - - - - - - - - - - - - - - -
- 0.2 -0.04 1.93 1.62 1.3 1.95 1.25 0.64 -4.28 -1.97 -3.22 - - -4.26 4.3 -0.06 -0.55 -3.39 -1.35 -0.58 -2.02 1.01 -0.57 -0.96 -1.34 -3.92 -2.69 -0.88 -2.47 -5.12 - -6.51 -3.16 -2.86 - -4.6 -4.64 - - - -2.77 -2.1 -3.71 - - - -2.76
- -0.39 - - - - - - - - - - - - -1.76 4.97 3.06 2.25 - - - - - - -0.51 0.79 - - - -2.93 - - - - - - - - - - - - - - - - - -
2.02 -0.33 -0.5 0.25 2.28 1.6 0.19 0.75 1.94 -1.52 -2.56 -2.99 -2.48 -2.93 -1.72 4.44 - - - - - - -3.44 -3.28 -5.11 -5.74 -4.3 - - -3.91 -1.82 -4.15 -4.11 - - - - -1.33 - -2.02 - -5.89 -0.3 -0.98 -2.77 -1.61 -1.06 -
- - - - - - - - 3.25 - - - - - - 5.27 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.01 -2.31 -4.41 -6.98 2.98 0.91 -0.04 0.26 0.63 -1.97 -6.06 -5.82 -1.82 -3.23 -1.59 4.9 -2.82 -8.94 -2.36 -5.62 -8.59 -6.0 -4.63 -7.99 -4.6 -7.31 -5.41 -8.79 -3.87 -5.35 -4.25 -9.12 -5.98 -8.6 -8.94 -9.45 -8.61 -4.14 -6.38 -3.63 -5.61 -3.25 -2.18 -3.77 -5.36 -4.44 -4.07 -3.86
1.06 - -1.38 -5.38 1.82 1.2 0.33 0.3 1.02 -3.4 - - -3.52 -5.77 -1.81 5.05 -1.93 -4.96 -1.94 -2.22 -3.09 -2.1 -2.29 -6.43 -5.7 -4.84 -7.38 - - - -8.03 - - - - - - - - -5.83 - -5.8 -3.53 -5.2 - - -7.35 -
- - -3.09 -2.66 -3.49 0.42 1.52 -1.04 - -2.45 -2.37 - -1.6 - -4.41 5.15 -0.2 - - - - -0.65 -0.96 - - -0.1 - - 0.52 -3.42 -2.98 - -4.37 - - - - -2.31 -1.83 - - - -2.51 - 0.51 - - -
- - - - -0.27 - - - 3.51 - - - - - - 4.91 1.82 - - - - - - - - 1.14 - - - - - - - - - - - - - - - - - - - - - -
2.26 -0.39 0.33 - 2.4 1.09 - -0.51 - -0.14 -0.53 - - -0.38 -5.29 4.73 - -1.25 - - - - - - - - -0.94 - - -1.83 -1.15 - - - - -0.1 - - - - - - 0.6 - - - - -
1.26 -1.26 -1.02 -3.24 1.58 0.45 0.55 0.3 0.91 -0.71 -1.94 -2.41 -0.88 -0.69 -1.65 4.43 -1.67 -1.47 -1.04 -2.02 -2.14 -1.35 -3.97 -1.04 -2.3 -3.91 -3.45 -2.18 -3.14 -1.76 -0.98 -2.73 -1.48 -1.94 -4.29 -2.79 -1.99 -0.02 -2.41 -0.38 -0.67 -1.27 -0.32 -0.97 -1.39 -0.02 -1.3 -2.64
- - 0.01 0.03 - 0.36 -0.15 - - - -1.27 - - - - 5.12 1.64 -0.39 - - - - - - - 2.0 - - - - -1.55 - -1.94 - - - - - - - - - - - - - - -
- - -0.36 1.8 1.05 2.85 - 0.89 3.0 - - - - - -3.05 3.82 - -0.06 - - 0.41 -0.29 - - - 1.58 - - 0.46 -1.24 -1.58 - -2.38 - - -0.29 - -0.24 - - - - - - - - - -1.82
- - -0.5 -0.75 -0.3 -1.54 - - - - - - - - -1.29 5.16 0.44 -0.54 0.57 1.63 - 0.3 - -2.79 - -0.6 - - - -5.29 -2.73 - - -2.27 - - - - -2.1 - - - - - - -3.07 - -
0.82 - - 1.86 - - - - 1.45 - - - - - - 4.73 0.98 - - - 0.85 - 2.05 - 1.51 0.6 - - 0.1 - - - - - - - - - - - - - - - - - - -
- 0.35 -0.5 0.52 1.36 - - - - - - 0.28 - - - 4.79 2.7 0.82 - - - - - 0.67 - 0.59 - - - - - -0.49 - - - - - - - - - - - - - - -0.02 -
-0.8 0.17 0.31 -6.44 2.47 1.37 0.96 0.81 0.17 -2.23 -6.39 -7.48 -3.01 -2.09 -2.11 4.27 -2.52 -6.78 -2.22 -1.54 -0.9 -6.26 -2.18 - -8.5 -5.31 - -1.91 -4.09 -0.44 -0.93 -4.17 -0.49 -0.65 - -0.66 -1.3 -1.86 -0.34 -1.49 -3.49 -1.2 -0.22 0.37 -0.21 -1.99 -0.3 -1.47
- - -1.17 -2.4 -3.02 -2.24 -2.83 -2.59 - -6.25 -4.42 -3.56 -3.78 -5.5 -6.3 5.3 -4.03 -4.79 - - - - -4.54 -5.51 -2.13 -4.62 -5.91 - 2.6 -7.18 - - -5.37 -4.02 -5.28 - - - -3.2 - - - -2.55 - - - - -3.67
- - -0.04 1.32 - - - - 0.45 - - - - - -3.45 4.68 2.22 2.03 - - - - - 2.08 - 2.15 - - - -3.51 - - - - - - - - - - - - - - - - - -
- - 1.46 - - - - - - - - - - - - 5.45 - -0.3 - - - - - - - -0.44 - - - - - - - - - - - - - - - - - - - - - -
1.65 -3.48 -4.47 - 1.87 1.37 0.52 0.77 0.37 -0.34 -4.74 -5.13 -0.76 0.37 -0.93 4.57 -3.69 -7.96 -1.66 -5.85 - -8.24 -3.0 - -9.08 -6.49 - -7.83 -9.79 -3.05 -0.12 -5.47 -3.82 -6.3 -8.0 -8.07 -6.09 0.45 -6.63 -0.89 -0.67 -3.46 -0.76 -2.57 -3.67 0.67 -2.49 -5.81
- - - - - - - - 3.41 - - - - - - 5.01 1.78 0.83 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 2.57 1.39 -2.43 - - - - - - - - - -2.66 5.01 1.86 - - - - - - - - 1.73 - - - - - - - - - - - - - - - - - - - - - -
- 2.51 2.03 - - - - - 3.09 - - - - - - 4.54 1.1 -0.17 - - - - - - - 1.22 - - - - - - - - - - - - - - - -0.01 - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.