Heatmap: Cluster_292 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g007260.3.1 (Solyc01g007260.3)
1.27 1.14 1.33 0.36 1.44 0.66 -1.36 -1.19 -0.38 0.77 0.49 -0.08 -1.28 -2.95 0.44 0.41 0.47 - - -4.54 -2.47 -0.95 -1.22 -1.22 -1.91 -4.98 -0.81 -1.7 -3.1 -0.63 -0.49 -0.44 -2.75 2.56
Solyc01g068250.2.1 (Solyc01g068250.2)
1.27 0.12 0.85 0.04 0.29 -0.67 -0.62 1.02 1.28 -0.65 -0.53 -0.14 -2.88 -0.88 -1.54 -3.57 -3.76 - - -2.81 -2.04 -0.32 0.8 -0.04 -1.3 -5.07 1.53 0.3 -0.77 0.12 0.88 -0.84 -3.04 2.22
Solyc01g079130.2.1 (Solyc01g079130.2)
1.38 0.03 4.06 0.71 -2.63 -7.21 -5.5 -4.94 2.84 -0.33 -8.18 -5.75 -7.12 -4.15 -4.14 - - - - -8.99 -6.93 -3.39 -6.54 -3.43 -5.32 - -2.44 -1.81 -3.01 -2.29 -2.13 -3.53 -8.3 1.24
Solyc01g080580.3.1 (Solyc01g080580.3)
1.35 - -1.67 - 3.22 0.42 2.24 1.06 -0.71 -0.99 -2.69 -2.53 -1.16 -3.95 -1.24 -3.06 -2.93 - - -5.3 -5.72 -1.13 -1.12 -0.76 -1.87 -3.57 -1.23 -1.55 -3.02 -1.22 -1.11 -0.67 -1.08 2.65
Solyc01g091920.3.1 (Solyc01g091920.3)
1.15 1.79 1.6 -0.0 1.06 0.42 -2.02 0.06 0.41 0.61 -0.9 -2.26 -3.18 -4.25 -0.74 -0.51 -0.93 - - - -5.26 -0.96 -0.9 -1.12 -2.0 -5.92 -1.32 -0.68 -0.51 -0.22 -0.24 -0.52 -0.73 2.9
Solyc01g096120.3.1 (Solyc01g096120.3)
2.21 -7.04 2.48 2.03 1.43 0.04 1.35 -0.18 -0.66 -0.22 -6.0 -0.26 -4.81 -7.51 -6.24 - -5.63 - - -6.15 -3.56 -3.32 -3.19 -3.18 -3.85 -6.04 -5.11 -4.36 -4.4 -3.24 -2.45 -4.02 -1.38 3.14
Solyc01g104010.2.1 (Solyc01g104010.2)
0.49 1.02 2.93 1.63 1.88 0.47 1.14 0.08 -0.57 -1.33 -1.5 -2.02 -5.95 -2.87 -1.99 -2.91 -1.53 -7.42 - -4.27 -3.52 -2.99 -2.59 -2.71 -2.49 -1.44 -2.86 -2.88 -3.29 -2.0 -1.54 -2.24 -1.29 2.64
Solyc02g069630.3.1 (Solyc02g069630.3)
1.02 -0.37 0.99 1.02 0.12 -0.31 1.36 0.46 -0.11 -1.03 -1.95 -0.71 -0.99 -0.74 -1.55 -2.21 -2.06 - - -7.36 -4.01 -0.03 -0.27 -0.4 -1.25 -5.71 1.31 0.31 -0.37 0.42 1.0 -0.42 -2.26 2.41
Solyc02g077950.2.1 (Solyc02g077950.2)
1.31 -0.43 -0.27 0.4 0.33 -0.08 0.32 -0.65 0.72 0.47 -2.15 -2.08 -2.22 -2.73 0.8 0.57 -0.04 - - -3.51 -3.1 0.04 -0.96 -0.76 -0.73 -1.95 0.05 -0.38 -0.76 0.48 0.36 0.47 -0.53 2.62
Solyc02g091350.3.1 (Solyc02g091350.3)
1.76 -1.11 1.3 -1.63 1.65 1.29 1.44 1.06 0.39 -0.13 -1.56 -2.02 -1.23 -1.05 0.26 0.05 -0.37 - - -3.03 -2.06 -1.02 -1.55 -1.45 -1.54 -1.47 -0.41 -0.5 -1.02 -0.59 -0.83 -0.81 0.67 1.4
Solyc02g092370.1.1 (Solyc02g092370.1)
1.97 0.66 1.85 0.65 2.01 0.03 0.32 -0.01 0.59 -0.88 -1.42 -1.11 -1.84 -2.19 -1.6 -1.77 -2.12 -10.06 -10.48 -4.7 -2.74 -1.17 -1.09 -1.57 -2.37 -3.43 -0.97 -1.34 -2.29 -0.37 -0.57 -1.01 -2.69 2.78
Solyc03g005090.3.1 (Solyc03g005090.3)
0.4 -0.97 1.93 -1.44 1.12 0.79 2.08 0.39 -0.05 0.19 -1.36 -2.11 -0.73 -0.86 -0.39 -0.54 -0.16 -8.65 -9.2 -2.68 -0.8 -0.35 -1.32 -0.85 -0.49 0.29 -0.11 -0.07 -0.4 -0.11 -0.23 -0.15 -0.34 0.85
Solyc03g095490.3.1 (Solyc03g095490.3)
0.46 -2.35 0.92 -0.43 1.68 0.0 0.69 0.62 1.13 -0.48 -0.72 -0.72 -3.02 -1.74 -0.73 -2.47 -1.95 -9.53 - -4.62 -2.32 0.09 0.26 -0.2 -0.78 -7.09 0.14 -0.62 -1.46 0.39 0.48 0.2 -1.29 2.7
Solyc03g112930.3.1 (Solyc03g112930.3)
0.75 -4.86 1.72 0.52 1.45 0.6 -2.32 0.69 1.37 0.55 -0.7 -0.62 -3.93 -4.37 -2.82 -4.02 -3.64 - - -6.31 -2.52 0.32 -0.51 -0.08 -0.78 -6.66 -0.38 -0.95 -1.4 0.8 0.5 0.98 -0.94 2.26
Solyc03g114070.3.1 (Solyc03g114070.3)
-0.14 -0.18 1.12 0.36 0.1 0.48 1.45 0.43 0.65 -0.22 0.62 -0.33 1.48 1.06 0.49 -0.09 0.2 -7.64 -7.32 -1.64 -1.97 -1.28 -1.15 -1.49 -2.09 -1.18 -0.07 -0.12 -0.83 -0.76 -0.61 -1.42 -0.21 0.73
Solyc03g119180.1.1 (Solyc03g119180.1)
1.33 -5.49 0.12 -1.69 4.2 -0.31 -8.26 -0.44 -1.99 -1.21 -3.3 -4.25 -5.45 -7.5 -4.08 -3.71 -4.67 - - -8.02 -6.52 -1.59 -3.48 -2.52 -1.95 - -5.28 -3.39 -3.51 -2.26 -2.15 -1.26 -2.72 2.81
Solyc03g119350.2.1 (Solyc03g119350.2)
0.78 3.08 1.11 -1.05 0.38 -0.43 -0.78 0.33 1.88 -1.6 -3.29 -2.95 -2.91 -1.47 -0.12 -4.21 -0.89 - - - - -1.73 -0.96 -0.69 -2.08 - -1.34 -2.13 -0.88 -2.97 -1.51 -2.26 -3.82 2.89
Solyc04g008430.1.1 (Solyc04g008430.1)
2.48 -2.21 1.49 1.39 2.75 0.45 -3.66 -0.23 -0.41 -0.42 -2.92 -1.34 -6.31 -5.22 -2.58 -4.74 -3.57 - - -4.56 -1.99 -2.35 -2.15 -2.23 -2.62 -4.01 -2.57 -2.66 -3.64 -1.5 -1.5 -1.49 -1.41 3.07
Solyc04g009660.2.1 (Solyc04g009660.2)
1.75 - 2.22 -1.8 2.8 -1.2 - -1.4 -0.95 -0.52 -1.87 -3.54 - - -0.18 -0.59 -0.55 - - -4.37 -1.93 -0.33 -3.45 -1.6 -1.26 - -2.6 -1.71 -2.05 -0.02 -0.29 0.83 -4.6 2.97
Solyc04g015980.3.1 (Solyc04g015980.3)
1.47 -4.34 0.66 -2.42 1.6 -1.27 -2.19 -1.18 -1.29 -0.27 0.26 -1.14 -3.17 -3.67 0.26 -0.42 0.68 -4.89 -5.73 -3.19 -1.54 0.51 -1.1 -0.42 -0.53 -2.95 -1.07 -0.49 -0.72 0.92 0.55 1.77 -2.47 2.58
Solyc04g080940.3.1 (Solyc04g080940.3)
1.16 -1.61 2.04 1.35 1.31 -1.35 -0.89 0.32 0.36 -0.71 -0.81 -2.03 -6.58 -6.77 -1.41 -2.79 -2.28 - - -5.61 -2.13 0.72 -0.57 -0.44 -0.84 -9.31 -0.62 -0.57 -1.3 1.36 1.02 1.4 -1.05 1.76
Solyc04g081590.3.1 (Solyc04g081590.3)
0.5 -7.58 0.18 -4.46 1.17 -0.47 1.9 0.01 -0.49 -0.39 -1.53 -1.59 -0.3 -0.43 -2.15 -2.56 -2.79 - - -0.88 -1.94 -1.08 -0.68 -1.33 -1.96 -3.16 1.19 0.43 -0.76 -0.28 -0.32 -0.73 -0.65 3.28
Solyc05g009880.3.1 (Solyc05g009880.3)
1.29 -0.45 2.11 1.07 1.32 0.73 -2.01 0.59 0.8 0.69 -0.75 -1.23 -3.7 -4.63 -0.82 -1.16 -1.48 - - -5.5 -3.13 -1.0 0.44 -0.57 -1.32 -10.81 -1.27 -1.61 -2.65 -0.64 -0.44 -1.13 -1.61 2.7
Solyc05g010680.2.1 (Solyc05g010680.2)
0.8 -1.69 2.87 0.93 2.45 -0.4 -5.98 0.77 0.07 -1.38 -2.98 -2.18 -1.85 -3.43 -1.76 -3.22 -3.28 - -6.9 -7.18 -3.3 -0.08 -0.55 -0.83 -1.38 -4.14 -0.81 -1.13 -1.67 0.25 0.28 0.2 -2.78 2.12
Solyc05g050540.3.1 (Solyc05g050540.3)
1.16 -1.9 1.09 -0.95 1.25 0.03 -0.69 1.58 1.54 -0.01 -0.64 -1.73 -0.05 -1.65 -1.18 -1.53 -2.0 -8.14 - -2.04 -1.6 -0.35 0.39 -0.52 -1.3 -1.52 -0.64 -0.86 -1.87 0.19 0.18 -1.03 0.87 2.17
Solyc05g052430.2.1 (Solyc05g052430.2)
0.86 0.91 0.46 1.07 -1.34 -0.74 0.29 0.16 -0.26 0.01 -0.36 -0.76 0.71 0.17 -0.4 -0.71 0.37 -4.8 -4.57 -1.33 -1.11 -0.01 0.54 0.19 -0.13 -1.47 0.34 0.08 -0.35 0.01 0.2 -0.44 -0.88 1.34
Solyc05g055290.3.1 (Solyc05g055290.3)
1.91 1.43 1.53 -0.19 0.8 -2.89 -2.64 -1.1 -0.07 -1.43 -4.79 -3.85 -5.72 -9.23 -3.8 - -8.77 - - - -5.11 0.46 -0.18 -0.33 -0.85 -5.61 0.13 -0.55 -1.54 1.08 0.99 1.06 -6.12 2.96
Solyc05g056140.3.1 (Solyc05g056140.3)
1.2 0.15 -0.14 -1.39 1.83 0.22 1.4 0.35 0.25 -0.11 -0.07 -0.38 1.06 0.51 -0.73 -1.73 -1.48 - -11.02 -2.13 -1.97 -0.87 -0.82 -1.11 -1.73 -1.69 -0.85 -1.12 -1.4 -0.54 -0.49 -1.27 0.43 2.28
Solyc06g066580.3.1 (Solyc06g066580.3)
1.66 -2.83 2.04 0.51 0.04 -0.9 -0.39 -0.91 0.44 0.14 -2.29 -2.52 -2.32 -3.27 -1.67 -1.38 -1.45 - - -2.32 -1.44 0.28 -1.6 -0.83 -0.89 -3.92 -0.38 -0.46 -1.14 0.91 0.57 1.21 -3.8 2.83
Solyc06g069300.1.1 (Solyc06g069300.1)
1.22 -3.12 -0.46 -5.21 2.14 0.19 0.44 0.49 0.47 0.42 -0.11 -0.36 -1.03 -1.97 -0.42 -1.27 -1.21 - - -4.95 -1.76 -0.68 -0.69 -1.08 -1.57 - -0.67 -1.02 -1.9 -0.02 -0.38 -0.32 -2.17 3.2
Solyc06g071590.3.1 (Solyc06g071590.3)
1.88 1.03 1.71 2.77 1.99 -0.88 -0.52 -0.56 0.27 -1.08 -1.6 -1.29 -4.49 -3.99 -0.93 -1.25 -1.67 - - -3.24 -2.93 -1.81 -0.91 -0.98 -1.5 -3.28 -0.92 -0.98 -1.34 -1.0 -0.83 -1.42 -4.47 1.84
Solyc06g075600.3.1 (Solyc06g075600.3)
0.99 -2.53 1.6 1.17 2.16 -1.11 -5.17 -1.66 0.28 -0.59 -1.48 -0.82 -4.96 -4.89 -1.7 -1.06 -2.2 -8.62 -9.49 -3.17 -0.88 0.01 -0.57 -0.12 -0.07 - -0.11 -0.3 -0.82 0.68 0.23 0.72 -3.84 2.67
Solyc06g076030.3.1 (Solyc06g076030.3)
1.03 -0.15 1.3 1.12 0.72 0.02 -1.99 -0.19 0.97 0.15 -1.32 -0.72 -3.87 -2.92 -0.49 -1.01 -0.93 - - -1.89 -0.71 -0.44 -0.6 -1.04 -1.25 -2.35 -1.22 -1.6 -1.98 -0.37 -0.21 0.39 -1.92 3.18
Solyc07g005540.1.1 (Solyc07g005540.1)
1.02 -0.32 0.91 0.55 1.25 1.04 1.48 1.28 0.45 -0.77 -0.1 -1.24 1.13 0.84 -2.26 -4.59 -3.59 - - -6.26 -2.49 -2.09 -0.74 -1.88 -2.98 -6.21 -0.28 -1.27 -2.1 -1.51 -0.95 -2.83 -0.4 2.55
Solyc07g006170.3.1 (Solyc07g006170.3)
1.83 -1.21 1.44 -1.8 -1.44 0.74 2.01 0.93 1.08 0.63 1.37 -0.06 1.17 0.47 -0.31 -1.35 -0.92 - - -3.23 -3.22 -1.85 -1.0 -1.34 -2.38 - 0.14 -0.9 -1.48 -2.05 -0.89 -2.77 -0.09 0.06
Solyc07g007020.3.1 (Solyc07g007020.3)
0.74 -2.34 1.15 -0.34 2.04 0.86 -1.58 0.32 1.98 -1.04 -1.91 -2.17 -3.2 -4.18 0.4 -2.2 -1.35 - -9.89 -3.51 -2.68 0.15 -1.54 -1.13 -1.72 -4.88 -1.04 -1.63 -1.68 -0.13 0.4 0.32 -1.58 2.84
Solyc08g013980.3.1 (Solyc08g013980.3)
0.71 -0.59 2.35 1.54 0.7 -0.78 -1.05 -1.01 0.85 0.23 -0.65 -0.78 -1.47 -2.63 -0.18 0.02 -0.25 -4.62 - -1.67 -0.17 -0.53 -1.33 -1.07 -1.32 -1.23 -0.02 -0.01 -0.07 0.19 -0.17 0.4 -3.33 1.59
Solyc08g066810.3.1 (Solyc08g066810.3)
1.5 - 0.12 -7.22 1.4 0.97 -6.54 1.13 1.88 1.45 -0.52 -4.03 -1.44 2.01 -1.67 -2.47 -3.65 -1.25 -2.27 -6.04 -3.69 -0.29 -0.3 -0.51 -1.58 -3.53 -0.84 -1.26 -2.69 -0.03 0.34 -0.6 -0.2 1.45
Solyc08g079120.2.1 (Solyc08g079120.2)
1.24 -1.86 1.75 0.65 1.82 0.76 -4.78 0.86 1.16 0.54 -0.02 -0.66 -2.43 -4.58 -1.58 -3.04 -3.02 - - - -5.13 -0.19 -0.37 -0.69 -1.09 - -0.94 -1.11 -2.16 0.29 0.22 -0.45 0.05 2.35
Solyc08g080890.3.1 (Solyc08g080890.3)
0.72 -0.64 1.87 -0.04 2.24 -0.95 0.69 0.13 0.3 -1.43 -1.32 -1.87 -3.5 -2.57 -1.97 -3.37 -3.6 -4.96 - -6.99 -2.61 0.39 -0.21 -0.43 -1.01 -3.64 0.15 -0.36 -1.61 0.93 0.81 0.55 -4.17 2.35
Solyc09g011170.3.1 (Solyc09g011170.3)
2.21 -2.65 1.5 -0.78 0.01 0.38 0.57 -0.0 0.46 0.78 0.52 -1.02 0.53 -0.01 0.05 -0.85 -0.36 - - -3.97 -2.17 -1.12 -1.49 -1.42 -1.55 -3.09 -1.24 -1.22 -1.71 -1.25 -1.0 -1.11 -2.0 2.69
Solyc09g018490.3.1 (Solyc09g018490.3)
-0.89 - 1.18 -2.68 1.97 0.4 -5.7 0.07 0.19 1.32 -0.47 -1.54 -1.22 -3.3 0.0 -0.34 -0.4 0.22 1.39 -3.39 -1.48 -0.06 -0.2 -0.31 -0.74 -6.62 -0.19 -0.5 -0.7 0.35 0.27 0.61 -3.03 1.65
Solyc09g075630.1.1 (Solyc09g075630.1)
1.7 -2.91 -0.02 -1.25 2.91 0.4 -0.11 -1.29 -0.24 0.64 -0.88 -2.0 -2.18 -1.56 -0.11 -0.49 -1.07 - -5.68 -3.14 -1.55 -0.63 -2.02 -1.63 -1.38 -0.63 -1.26 -1.51 -1.66 -0.48 -0.19 0.33 -1.75 2.63
Solyc09g075900.3.1 (Solyc09g075900.3)
-0.08 0.13 -0.77 -1.9 1.56 0.66 -5.07 1.2 1.47 0.86 0.14 -0.14 -2.58 -2.93 -0.47 -2.66 -2.73 - - - -5.36 0.2 1.24 0.13 -0.96 - -0.3 -0.73 -1.86 0.86 0.86 -0.27 -0.85 2.16
Solyc09g091260.3.1 (Solyc09g091260.3)
1.26 0.9 1.73 1.17 0.1 -0.63 -1.0 -0.34 -0.31 0.82 -0.43 -1.17 -0.97 -1.94 0.23 -0.33 0.44 -7.39 -8.77 -3.87 -2.1 -0.52 -0.44 -0.62 -1.25 -3.9 -0.02 -0.37 -0.82 -0.02 -0.07 -0.21 -2.15 2.34
Solyc10g009360.3.1 (Solyc10g009360.3)
1.68 -5.85 3.05 2.37 0.03 -1.73 -2.98 -0.45 0.51 -0.64 -0.28 0.42 -3.2 -2.8 -3.55 -7.7 -6.11 -4.77 -4.93 -6.38 -4.45 -1.31 -1.62 -1.86 -2.75 - -2.46 -2.25 -2.73 -0.96 -0.63 -1.07 -3.57 2.82
Solyc10g083830.2.1 (Solyc10g083830.2)
1.57 2.01 -0.06 0.05 -0.11 -0.61 0.42 0.35 0.11 0.22 0.09 -0.49 0.94 -0.0 -0.68 -0.85 -0.49 -8.76 - -1.21 -2.36 -0.0 -0.04 -0.35 -0.71 -0.31 -0.92 -0.71 -0.68 -0.13 0.04 0.08 -3.22 1.21
Solyc11g012930.2.1 (Solyc11g012930.2)
0.68 - 1.95 -3.94 2.63 0.39 -8.71 -0.86 -1.11 1.14 -4.04 -6.38 -7.95 -12.49 -1.45 -1.46 -0.32 -10.73 - -0.71 0.18 -0.04 -3.75 -1.63 -1.54 -0.4 -2.67 -1.48 -0.79 0.4 -0.05 1.5 -0.61 2.34
Solyc11g071230.2.1 (Solyc11g071230.2)
1.5 0.51 -0.35 -0.02 -0.56 -0.66 1.63 0.39 0.6 -0.42 0.03 -0.03 -0.28 -0.63 -1.2 -2.16 -1.5 - - -2.16 -1.38 0.58 0.62 0.23 -0.23 -1.38 0.28 0.08 -0.16 0.31 0.63 0.41 -1.25 0.82
Solyc11g072580.2.1 (Solyc11g072580.2)
1.03 -4.23 2.46 1.29 1.14 0.16 -1.12 1.69 0.73 -0.89 -2.71 -3.08 -5.47 -5.53 -1.87 -5.34 -4.81 - - -7.04 -6.58 -0.69 -0.34 -0.99 -1.47 -8.5 -1.58 -1.76 -2.91 -0.16 0.06 -0.2 0.13 2.83

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.