Heatmap: Cluster_28 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
-3.23 -1.47 -2.0 -4.52 1.17 -0.45 -0.45 -0.95 -3.96 0.33 -6.04 -5.91 0.26 -1.14 0.28 -8.53 -2.36 -6.64 -1.97 -2.28 -3.8 -4.76 -3.16 -5.47 2.17 1.64 4.27 -1.73 -0.85 -1.58 -0.66 -5.81 -1.82 -1.67 -1.45 -4.13 -1.04 -0.64 -2.01 0.45 -1.62 -2.02 1.3 -0.75 -0.9 -0.75 -2.39 -1.2
-3.73 -6.49 -5.39 -5.58 -1.38 -1.31 -3.34 -2.2 -3.35 -0.42 0.1 0.2 -1.22 -2.81 -1.26 -2.63 -2.06 -0.95 -4.33 -3.59 -2.96 -2.67 -9.08 0.57 2.03 1.1 4.39 0.85 -1.42 -0.24 -0.13 0.07 0.07 -1.03 -1.16 -0.99 -0.17 -0.96 -3.02 -2.45 -4.98 -4.43 -2.09 -1.99 -1.75 -1.04 0.93 -2.44
- - -7.35 - - - - - - - -6.63 -5.92 - - - - - -5.61 -1.92 - - - - -3.74 2.17 0.76 5.3 -4.36 -2.9 -2.19 - -6.79 -5.52 -1.23 - -6.56 -6.72 - -3.95 - -4.47 -6.6 - -7.05 -6.01 -5.5 -6.28 -0.17
- - -0.51 - - - -2.18 - - -2.5 -3.4 -1.3 - - -2.72 - - -1.66 - - - - - - 2.77 1.44 4.96 -1.56 -1.41 -2.04 -4.41 -2.49 -2.99 - - -2.09 - -0.88 -2.45 -1.89 0.33 -1.48 -2.97 - -2.83 -2.92 -3.2 -0.54
- 1.48 -2.27 - -2.12 -0.76 -2.52 -3.62 -1.6 -2.81 -4.03 - -3.66 - -4.79 -0.46 -1.5 -4.07 - - - - - - 2.05 -0.82 5.21 - -4.31 -5.19 -4.39 -5.25 - - - - -4.81 -3.54 - - - -3.92 -3.62 - -4.52 - - -5.68
- - -5.63 - -6.58 -4.9 -5.96 -5.37 - -2.46 -6.34 -6.64 -2.13 -2.81 -1.85 - -5.53 -5.31 -3.44 -3.9 -5.77 -4.28 - -2.02 2.21 -3.39 5.24 -1.77 -2.73 -3.11 -1.86 -2.79 -1.72 -2.52 -2.86 -1.99 -1.06 -3.16 -2.76 -3.54 -2.94 -3.38 -2.33 -3.35 -2.79 -3.3 -3.06 -1.04
-1.07 -0.3 0.19 -2.2 0.15 0.27 -0.19 0.1 -0.4 -1.04 -3.96 -4.04 -1.24 -1.11 -1.0 -2.51 -0.68 -0.77 -0.45 -0.03 -0.19 -0.51 -1.85 -0.42 1.46 -0.44 4.04 -0.29 -0.98 -0.75 -0.49 -1.46 -0.55 -0.79 -1.29 -1.14 -0.34 -0.35 -1.18 -0.73 -0.89 -1.1 -0.5 -0.79 -0.64 -0.42 -0.91 -0.49
-7.71 - -8.57 -5.82 -8.99 -5.57 -4.29 -3.77 -6.43 -4.63 -1.13 -1.16 -4.71 -3.85 -8.99 -6.27 -6.31 -6.6 -3.3 -5.18 -5.93 -6.05 -3.81 -8.03 2.7 1.53 4.9 -3.86 -3.04 -1.76 -2.54 1.24 -4.26 -5.55 -2.96 -6.83 -4.92 -0.96 -6.55 -1.99 -0.22 -0.66 -2.06 -2.56 -4.19 -0.73 -3.05 -0.98
- -0.56 1.4 0.31 1.64 1.53 -1.77 - -1.34 -2.36 0.16 -2.29 - -2.59 -2.23 - 0.48 -3.36 -0.23 -0.8 0.14 0.06 - -2.5 1.72 1.28 4.22 -2.42 -2.52 -0.96 -2.63 -1.67 -2.96 - - - -1.0 - -1.7 -1.49 -1.19 -0.91 -2.3 -2.01 - - -0.82 -0.78
- - - - -4.33 - - - - - - - - - - - -1.67 -1.94 - - - - - - 3.42 1.61 5.07 - -3.78 - - - - - - - - - - - - - - - - - - -
-4.9 -6.19 -6.56 -8.82 -3.34 -4.99 -7.66 -5.22 -3.37 -5.77 -2.5 -2.68 -3.3 -2.84 -6.45 -6.09 -6.18 -7.49 -4.93 -4.86 -5.27 -6.25 -6.16 -8.74 2.69 2.18 4.95 -4.32 -2.22 -2.77 -5.96 -4.12 -5.67 -8.42 -7.53 -6.61 -6.26 -2.46 -7.72 -2.95 0.43 0.01 -1.84 -1.85 -0.88 -2.05 -4.27 -1.62
-9.46 -7.51 -8.57 -10.96 -6.74 -7.28 -8.28 -8.62 -8.41 -15.76 -13.23 -14.0 -9.76 -9.9 -12.68 -10.8 -10.63 -14.06 - -14.14 - - -12.67 -12.86 2.36 1.12 5.34 -9.23 -7.02 -11.48 -11.79 -6.65 -13.95 -12.3 -8.14 -8.39 -12.66 -11.73 -14.61 -13.38 -9.18 -10.74 -11.28 -14.67 - -12.76 -11.7 -11.0
- - -2.53 - -7.51 -7.83 -4.08 -5.77 - -7.93 -0.65 -1.16 -6.68 -7.6 -7.87 - 0.19 -4.28 0.84 1.42 -1.37 -2.61 0.02 - 2.23 1.79 4.72 -1.0 -5.41 -6.48 -5.9 1.82 -5.29 -5.47 -6.7 -1.2 -4.42 -7.52 -4.79 -5.45 - - -7.39 -5.08 -6.66 -8.84 -4.74 -5.3
- - - - - - - - - 1.19 - - - - - - - - - - - - - - 1.42 - 5.31 - - - - - - - - - - - - - - - - - - 1.77 - -
- - -2.22 - - - -5.68 - - -1.62 -1.44 -2.29 -1.08 -2.09 -2.75 -6.18 -3.65 -6.6 - - - -6.38 -5.86 -5.76 1.23 1.9 4.64 -0.92 -4.72 -0.79 -1.44 2.21 -1.08 -1.73 0.35 -0.46 0.4 -1.76 -2.73 -1.3 -0.41 -1.5 -1.22 -1.56 -1.32 -1.63 -1.43 -0.46
-8.11 -1.76 -0.87 -7.43 -2.21 -1.44 -1.88 -2.07 -6.12 -6.43 -6.92 -8.28 -8.02 -10.01 -8.06 -6.26 1.75 -3.3 0.7 0.45 0.81 -3.18 -0.25 -6.35 2.98 2.32 4.57 -7.59 -7.79 -6.88 -5.48 -6.66 -8.61 - -10.47 -7.64 -8.25 -5.59 - -7.93 - -8.54 -5.85 -5.81 -8.94 -5.85 -5.32 -8.45
- - - - - - - - - - 2.09 - - - - - - 2.11 - - - 2.09 - - - 3.79 3.72 - 1.91 - - - - - 1.78 - - - - - - - - - - - - 0.04
- - - - - - - - -2.73 - - - - - - - -1.91 -3.79 -2.95 - - - - -3.95 2.89 0.53 5.25 -3.93 -4.26 -6.17 - -4.23 - - -4.42 - - -4.01 - - -3.7 - - - - - - -5.83
- - - - - -2.97 - - - -5.04 -1.63 -1.24 0.38 -0.86 -2.33 - -1.92 -0.63 - -3.12 - -0.56 - - 2.64 0.22 4.93 -3.91 -3.3 -3.49 -4.87 -2.32 -5.21 -4.79 -6.32 - -4.13 -4.49 -2.92 -2.59 0.81 0.57 -3.12 -1.97 - -4.14 -4.79 -0.17
- - - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - -
- - -1.52 - - -2.24 - - - -0.42 -0.78 -0.7 -3.42 -3.13 -3.32 - - -3.99 - - - - - -1.69 1.03 -3.32 4.2 0.88 -1.73 -0.02 1.73 0.19 0.57 0.22 -0.36 -0.73 0.99 1.09 -1.95 -0.2 -1.04 -1.02 0.03 -0.46 -0.67 1.22 -0.32 -0.05
- - - - - - - - - -3.74 0.32 0.47 -4.42 - -4.83 - - - - - - - - - 1.88 -2.34 4.75 0.25 -1.6 -0.09 1.21 -0.2 -0.4 -0.56 -1.41 -0.63 0.85 -0.4 -2.43 -1.02 -2.01 -1.02 -1.71 -2.8 -2.34 -0.43 -1.17 -0.77
- -2.54 -3.79 -3.6 -4.26 -4.43 -6.46 -5.23 -2.93 -6.65 -8.14 - -5.37 -6.84 -9.35 - -3.62 -7.19 -4.02 -2.32 -1.99 -1.41 - -7.7 2.85 1.36 5.19 -6.25 -6.98 -8.75 -8.29 - -8.6 - -8.49 -8.08 - - - - -6.19 -7.93 -7.28 -8.56 - -7.8 - -6.65
0.89 1.01 0.97 - -4.9 -3.06 0.23 - 0.01 -1.03 - - -3.34 -3.53 -2.15 -3.1 -0.33 -2.8 - - - - - -2.23 1.43 1.19 4.81 -1.95 -3.05 -2.56 -4.82 -1.05 - -4.04 - -3.24 - -0.43 -3.14 -3.3 -1.15 - -2.07 - -2.46 -0.52 -0.31 -3.19
- - - - -5.27 - - - - - - - - - - - - - - - - - - - 2.5 - 5.36 - - -7.41 -4.66 - -2.52 -3.4 - - -3.91 - - -2.29 - -3.85 - -1.76 -3.24 - -3.98 -
- - - -5.74 -6.46 -6.66 -7.28 -5.58 -2.56 -10.3 - - -9.37 -5.53 -7.32 - -7.21 -9.2 - - - - -5.45 -6.2 2.73 2.27 5.17 -7.37 -5.75 -7.79 - -4.7 - - -6.43 -6.85 -8.99 -5.23 -8.68 - - -9.0 -7.18 -9.64 -9.6 -6.07 - -8.58
-5.98 - -4.72 - -3.64 -3.94 - -5.7 - -4.9 -3.31 -6.32 -6.25 -6.87 -5.26 - -6.15 -3.88 -4.32 -4.95 -5.71 -6.02 - -5.73 2.48 2.68 5.14 -6.62 -7.57 -9.33 - -6.18 - - -7.37 - - - - -7.25 - - -6.73 -6.54 - - -6.67 -
- -7.89 -2.34 -3.81 -2.45 -2.76 -3.54 -2.55 - -9.0 -5.3 -5.11 -7.03 -5.57 -9.19 -4.72 -5.12 -6.12 - -7.9 - -6.03 -3.96 -6.74 3.09 2.22 5.04 -3.5 -1.75 -3.21 -8.64 -6.26 - - -6.78 -6.85 -8.12 -7.97 -7.49 - -3.31 -6.9 -5.91 - -8.07 - - -3.92
- - - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - -
- - -2.64 -5.4 -5.77 -3.41 - - - -0.94 -4.55 - -0.95 -3.08 -6.21 - -2.68 -1.59 -3.43 -3.33 - - -3.7 1.82 1.79 2.07 4.63 -3.1 - -0.34 -6.25 1.45 -2.73 -4.56 - - -4.95 0.21 -5.88 -1.08 0.43 -0.7 -0.21 -1.51 -4.11 -0.43 -6.34 -1.84
- -0.15 - - - - - - - -4.42 0.35 0.37 - - -6.1 -0.22 -2.27 - - - -2.4 -0.52 - -3.49 3.05 -2.57 4.52 0.4 1.47 -3.7 -2.46 -2.84 0.34 -1.11 0.13 -0.56 -0.75 -2.45 - - -3.24 -0.63 -1.31 - -1.66 - -0.81 -1.82
-3.62 0.67 -1.63 -4.55 1.27 1.18 1.2 1.12 0.57 -0.4 -1.45 -1.62 -1.92 -2.17 0.45 -6.25 -1.44 -3.76 -4.63 -7.63 -4.13 -4.18 -2.74 -6.01 1.51 1.25 4.63 -7.61 -7.94 -5.13 -4.04 -6.98 -7.17 - - - - -3.5 - -3.59 - -5.4 -0.77 -2.7 -4.51 -4.18 -3.68 -
- - -4.6 - -4.69 -0.74 -2.09 -2.43 - -0.52 -0.23 -0.77 0.4 -1.69 0.06 - -0.2 -0.41 - -3.74 - -0.15 - -1.66 2.21 1.79 4.37 -1.64 0.69 -1.04 -1.17 -0.59 -2.43 -1.49 -0.8 -0.91 -2.48 -1.04 -3.12 -4.06 -2.35 -1.71 -1.71 -1.37 -3.51 0.22 -5.11 0.89
- - - 4.41 - - - - - - - - - - - - - - - - - - - - - - 4.74 - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - -
- -5.65 -6.11 -7.13 -8.21 -7.55 - - - -5.74 -6.47 -6.44 -4.24 -0.67 -4.32 - -7.37 -10.11 - - - - -5.5 0.14 2.85 0.94 5.03 -1.64 -2.43 -2.28 -7.11 -6.31 -3.24 -7.95 -6.57 -1.61 -4.25 -7.82 -7.86 -2.12 0.42 -1.37 -3.12 -0.2 -4.2 -8.27 -6.15 -4.14
- -3.2 -4.27 -1.82 -1.0 -1.94 -2.61 -2.83 - -6.6 - - -4.87 -7.01 -5.49 -3.99 -4.36 1.62 -0.23 - - -7.16 - -1.91 3.0 1.61 4.66 -5.88 - -6.16 - -6.46 -7.19 -7.34 - - -6.24 -6.75 - -3.99 0.98 1.63 -1.21 -4.48 - -5.53 -5.09 -5.48
- -7.07 -4.78 -9.78 -7.67 - -9.38 - - -5.92 -8.0 -9.79 -6.39 -7.42 -6.57 -2.8 -4.3 -4.03 -6.38 -7.48 -8.29 -8.5 -6.5 1.08 3.04 2.48 4.84 -4.8 -5.29 -2.99 -6.57 -6.91 -2.88 -1.73 -4.19 -4.54 -4.61 -3.48 -3.46 -4.5 -0.34 -0.61 -4.56 -5.14 -4.11 -2.95 -4.86 -1.82
- - - - - - -5.88 - - - - - - - -11.36 - - - - - - - - - 3.21 1.6 5.16 - -6.55 - - -7.16 - - -7.31 - - - - - - - - - - - - -
0.93 - 0.13 - -1.26 0.6 0.29 0.05 -1.19 -0.56 -2.82 -3.57 -0.49 1.66 -0.84 1.87 -1.11 -3.83 -2.62 -1.94 -0.72 -0.52 - - 1.45 1.13 4.32 -3.92 -1.82 -3.16 -1.9 -4.97 -2.01 -3.43 -1.55 -2.52 -3.78 -2.01 -3.62 -2.12 -3.79 -3.57 -0.73 -1.25 -2.91 -1.78 -1.93 -2.82
- - -1.74 -1.84 - -1.52 - - - - - - - - - - 1.21 0.43 2.8 2.74 -0.03 - - - 2.05 -0.31 4.46 -1.88 -1.86 -4.19 -2.88 - -4.18 -3.32 - -2.7 - - - -3.37 - - -3.28 -2.65 -3.18 - - -1.54
- - - 0.69 -1.72 -1.42 -3.04 - - - - - - - - - 0.17 - 1.64 -1.06 -2.9 -1.23 -1.64 - 3.46 -1.58 4.84 - -5.68 -8.17 - - -6.19 -4.91 -5.47 - - - - - - - -4.76 - - - - -
- - 0.59 -0.26 -3.06 -2.91 -2.45 - -0.69 - - - - - -4.32 0.29 -0.77 -2.08 - - - - - 1.33 1.93 2.29 4.96 - - -5.99 - - - -2.72 - - - - - - - - - - - - - -5.05
- - -5.69 - - - - - - -6.18 - - - - - - - -5.16 - - - -5.06 - -0.2 2.67 -1.91 5.31 -4.04 -2.97 -6.14 -6.05 - -6.5 -5.23 - -5.37 -4.31 -4.48 -3.76 -3.86 - -5.25 - -3.61 -5.48 -4.59 -3.69 -5.33
-14.71 - -11.97 -5.79 -4.51 -5.05 -6.26 -6.19 -7.96 -14.57 - - -13.7 - -12.46 -8.84 -11.93 -11.92 - - - -11.85 -12.05 -12.88 2.21 2.56 5.22 -8.94 -6.55 -13.45 - -6.32 - - -7.5 -8.24 -11.24 -12.01 - -14.0 - - - - -13.14 -13.01 - -
-0.6 -2.39 -1.44 -0.25 1.25 0.43 -0.1 -0.14 -0.76 -0.43 -1.87 -2.14 -1.11 -1.34 -0.82 -0.97 -0.86 -0.93 -0.83 -0.41 -0.05 -0.37 -1.71 -1.91 1.63 0.11 3.37 -0.13 0.02 -0.48 -0.33 -0.43 -0.11 -0.14 -0.12 -0.7 0.24 0.09 -1.03 -0.35 -0.22 -0.91 -0.07 -0.31 -0.37 0.09 -0.64 -0.47
-2.76 -2.75 -2.97 -2.47 -2.16 -1.13 -0.27 -0.64 -1.6 -1.46 -4.98 -4.51 -0.85 -1.65 -0.99 -4.82 -4.3 -3.13 -2.57 -1.78 -3.06 -3.24 -2.57 -5.07 2.77 0.68 4.63 -0.6 -2.57 -1.32 -0.73 -1.54 -1.73 -2.02 -2.33 -0.63 -0.42 -0.35 -2.59 -2.09 -1.36 0.16 -2.39 -2.76 -2.45 -0.63 -2.48 -1.11
0.0 -2.16 -4.92 -5.13 0.83 0.22 -1.13 -0.48 -0.62 -1.66 -2.97 -3.15 0.54 -0.24 -0.32 1.51 -2.15 -4.03 -1.78 -2.01 -2.32 -3.13 -3.74 -4.74 1.59 1.46 4.2 -2.59 -1.35 -1.66 -1.92 -6.07 -2.24 -2.63 -5.3 -3.01 -2.36 -1.86 -1.57 0.64 -0.06 -0.65 -0.16 -0.75 1.17 -1.92 -2.16 -2.6
0.94 2.34 0.11 -0.97 -1.77 -2.72 -3.36 -3.54 1.09 - - - - -3.56 -5.39 1.69 1.6 -4.29 - -3.44 - -3.19 - -3.58 0.34 2.0 4.62 - - -6.77 - -3.88 - - - - - - - - - - - - - - - -
-0.78 -2.03 -1.3 -2.66 -3.24 -1.48 -1.09 -0.67 -1.14 -4.91 -4.13 -5.31 -2.68 -3.66 -6.57 -1.19 -2.56 -4.67 -1.71 -3.55 - -4.64 - -4.45 0.42 1.19 5.28 -4.74 -5.57 -4.38 -4.96 -4.57 -4.83 -4.53 - -6.17 -4.17 -5.16 - -6.25 -4.07 -4.34 -5.16 -5.54 -4.07 -4.24 -5.67 -4.96
-17.66 0.03 -2.32 -3.25 -0.22 -1.06 1.24 -0.17 - -2.61 - - - -3.43 -2.86 0.58 0.31 -1.01 0.13 2.04 0.39 1.42 - -2.98 0.85 0.29 4.58 -1.23 0.13 -4.09 -5.06 -4.42 -6.41 -7.95 - - - -3.81 - -2.84 -5.04 -3.64 -4.11 - - -3.75 - -3.94
- -3.07 -3.84 0.82 -0.19 1.79 2.22 1.92 - - - - - - - -4.54 -1.89 - - -4.11 -3.81 - - -5.0 3.11 -0.3 4.54 - - -6.61 -6.27 - - -5.48 - - - - - - - - - - - - - -
0.89 -0.65 -3.24 -2.21 1.75 0.52 0.99 0.88 0.63 -0.95 -6.86 -6.44 -2.33 -3.78 -1.12 -1.78 -1.95 -4.56 -1.99 -3.49 -7.69 -6.87 -4.56 -4.57 2.75 1.74 4.46 -8.78 -7.86 -6.18 -4.98 -5.15 -8.86 - -8.27 -9.49 -8.65 -2.7 -8.39 -4.87 - -8.8 -2.99 -4.16 -6.05 -2.71 -4.81 -9.79

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.