Heatmap: Cluster_2 (HCCA)

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Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
24.39 24.85 12.94 5.34 16.63 28.84 24.73 20.02 27.56 68.53 0.99 0.99 42.74 21.08 68.12 14.13 37.8 33.6 32.75 39.36 50.07 50.0 77.98 8.65 26.68 10.3 6.75 240.6 159.08 160.58 153.44 50.42 135.06 206.3 123.48 193.12 147.17 80.7 195.44 92.98 7.72 15.33 91.01 177.6 121.07 79.41 271.4 90.24
23.86 45.88 14.43 3.17 7.12 14.73 15.94 8.37 24.26 44.35 0.51 0.45 23.11 7.22 39.23 8.93 15.03 11.88 16.86 34.17 30.96 27.86 4.53 9.59 14.09 7.48 3.46 156.66 110.23 88.57 83.11 36.99 61.88 125.0 58.45 122.36 84.02 46.35 106.86 37.12 0.21 1.73 44.75 131.07 56.62 42.17 191.58 47.82
60.97 50.55 19.06 16.33 70.12 65.62 53.15 51.31 45.97 142.18 2.63 1.83 62.0 24.01 134.97 32.19 52.34 40.33 40.55 60.05 74.63 79.97 35.99 20.62 54.66 25.34 14.53 331.02 256.89 170.45 211.37 92.23 161.8 233.31 185.97 275.93 187.65 126.23 180.49 102.69 6.41 13.18 108.37 239.26 139.67 118.02 411.91 110.59
101.66 125.79 50.39 22.65 12.75 30.31 31.31 26.68 126.26 103.22 4.21 3.67 84.97 48.15 122.85 74.76 127.62 87.38 39.56 69.38 92.06 67.54 26.91 20.17 44.77 58.38 28.34 252.5 160.59 140.45 146.43 89.78 117.1 182.07 122.38 175.21 151.17 113.84 160.99 93.63 8.04 15.99 95.05 157.35 116.12 113.09 208.18 94.31
3.72 9.11 11.98 3.45 6.11 5.39 5.17 8.45 4.27 21.63 0.9 0.99 13.62 10.62 20.62 9.0 13.91 20.04 7.21 10.09 11.9 10.29 9.34 4.54 6.74 3.53 3.34 41.51 34.41 25.57 21.94 12.28 23.77 36.36 21.23 26.35 26.68 18.58 37.68 18.33 3.55 4.6 16.14 37.27 23.02 17.66 39.73 20.61
50.47 83.57 38.82 14.76 28.08 22.19 16.36 11.0 80.49 118.75 10.16 9.68 78.34 43.11 132.85 52.93 68.27 63.1 49.59 57.29 75.63 74.35 43.27 17.88 51.79 36.44 27.64 335.0 265.3 199.44 205.57 98.52 173.94 259.8 158.02 261.87 205.58 124.05 212.62 108.67 22.86 28.13 105.84 171.36 143.41 122.66 336.11 144.91
21.04 31.11 18.6 17.28 44.02 10.54 22.79 12.33 20.79 36.27 0.92 0.74 26.62 15.89 44.58 9.94 21.47 49.12 17.2 17.24 31.66 30.77 2.44 16.82 32.85 18.21 10.6 114.51 33.9 63.94 48.27 22.53 44.73 74.85 22.43 82.24 53.84 35.36 61.02 33.41 9.53 12.31 34.87 79.84 40.88 33.31 109.94 32.79
130.77 211.0 88.9 33.92 18.12 54.22 41.97 39.66 199.02 222.42 6.23 4.81 162.12 106.93 209.46 128.45 190.78 204.2 66.28 126.42 172.0 175.92 43.33 63.5 98.96 137.89 46.18 487.58 346.86 316.92 321.57 126.75 270.82 400.46 297.52 414.77 322.89 282.04 364.47 193.27 19.7 29.71 191.84 315.03 234.76 274.87 497.95 198.0
78.19 111.84 73.2 30.93 50.24 64.0 68.43 60.51 119.31 172.65 7.24 5.4 67.85 21.13 167.21 58.47 96.91 129.41 116.9 144.83 157.04 141.12 71.26 55.28 93.76 67.11 36.52 382.1 232.2 244.8 266.74 121.34 175.98 234.73 162.38 265.03 215.67 179.5 126.38 85.67 10.38 15.48 100.17 174.33 106.06 176.85 398.48 140.6
44.08 67.17 37.46 14.5 17.82 70.02 107.79 74.5 63.95 185.12 5.24 4.6 92.96 28.78 172.04 38.76 63.1 53.89 66.32 93.97 119.78 98.81 16.78 26.49 71.45 49.35 35.7 372.93 305.17 244.54 279.57 113.01 192.36 327.15 236.47 284.71 227.12 195.26 222.76 125.22 8.09 17.3 133.08 236.66 147.58 190.68 438.03 146.35
5.11 10.25 8.19 1.09 6.95 10.79 11.46 12.16 6.77 31.01 0.58 0.57 18.18 9.16 32.82 8.05 14.76 18.08 6.48 9.95 15.31 22.9 2.7 4.82 18.3 9.36 12.36 69.92 55.62 40.81 47.91 20.14 40.77 60.61 27.42 43.95 54.68 31.89 40.3 26.14 5.72 6.53 23.48 48.96 33.34 29.6 73.34 28.65
30.85 30.51 25.97 8.46 32.24 19.65 18.97 17.19 24.17 26.6 4.36 4.88 18.19 17.77 30.42 24.37 25.72 24.76 12.6 18.91 20.21 19.15 19.74 7.19 16.97 12.18 11.63 59.33 35.71 42.35 39.91 39.19 40.66 45.72 22.9 64.54 42.32 23.46 51.31 28.87 6.57 8.25 27.58 57.9 40.8 23.2 71.6 29.61
14.45 12.14 14.54 2.96 4.21 5.2 3.83 2.16 4.02 20.36 2.99 2.87 9.49 8.08 26.39 8.09 17.63 14.68 11.8 20.63 20.56 22.15 44.98 10.39 9.87 7.12 6.34 68.47 21.65 45.04 24.34 17.46 27.9 44.73 19.25 71.62 24.23 23.12 46.97 23.73 5.45 9.11 21.99 47.06 28.78 22.81 62.92 30.95
53.69 65.56 43.72 9.6 26.5 26.09 16.74 22.06 77.93 102.91 2.81 1.37 52.6 27.82 113.85 42.44 57.27 43.7 64.49 73.0 73.72 60.71 62.34 12.13 35.52 15.67 16.72 351.53 244.92 216.65 188.23 112.42 164.32 235.64 136.56 351.81 172.84 95.29 224.86 103.57 8.41 13.21 94.49 324.07 144.9 89.18 398.18 134.01
32.34 36.6 36.6 10.61 30.83 11.62 16.03 14.69 18.88 46.78 12.36 13.49 40.21 51.45 64.88 17.71 66.05 31.04 52.01 65.88 59.28 40.56 61.99 22.51 28.16 17.44 20.8 94.68 51.57 82.12 70.62 47.03 65.96 79.55 62.13 102.09 66.55 43.98 94.7 76.59 29.56 32.17 76.18 80.04 85.13 43.35 102.11 76.05
81.73 83.79 53.53 66.42 28.48 14.63 16.96 16.64 88.89 74.18 1.48 1.14 35.22 17.84 95.95 30.73 77.14 76.74 27.55 53.82 58.02 65.83 19.1 28.36 34.31 40.96 11.94 139.0 63.45 100.71 89.56 30.95 68.14 129.63 49.17 91.74 70.09 67.84 90.21 50.46 4.78 9.83 57.22 87.28 58.32 66.54 161.88 78.74
59.64 67.13 47.06 15.99 32.94 31.44 36.13 35.02 48.66 117.62 5.79 4.46 74.71 34.74 102.83 21.77 71.65 79.54 46.31 60.7 84.67 88.6 33.07 84.55 45.15 28.44 17.97 349.03 215.81 231.78 219.89 113.5 189.84 285.82 170.24 281.37 222.4 129.91 224.96 112.89 13.48 23.35 118.56 216.1 151.39 120.67 468.02 117.03
35.61 33.71 25.59 6.58 17.35 19.92 24.58 22.93 28.49 76.93 7.24 6.46 84.34 48.69 80.41 15.53 38.07 33.81 28.7 41.68 60.8 60.32 21.42 14.15 46.74 37.71 36.92 146.71 106.87 95.96 104.68 57.4 89.07 135.16 80.28 101.21 122.19 88.87 145.37 89.69 32.47 31.6 87.36 107.33 96.39 89.39 152.52 81.67
53.25 58.7 35.37 29.71 71.28 26.54 25.91 26.72 39.01 75.35 2.87 2.85 38.99 15.96 92.29 31.08 66.69 64.98 43.59 61.01 77.64 67.48 24.16 35.4 54.66 34.19 29.94 161.62 75.19 108.09 120.66 47.56 89.03 126.44 38.15 140.18 105.67 67.64 90.77 60.4 11.12 14.47 57.13 109.11 59.5 60.46 191.69 82.64
51.34 58.3 43.4 44.33 42.04 43.15 25.08 28.0 31.68 91.02 4.43 4.53 64.68 34.63 94.89 27.69 56.01 64.47 43.17 57.19 66.64 60.08 44.37 19.91 39.83 15.69 20.44 192.6 166.08 126.62 132.03 69.37 115.61 174.77 108.09 190.96 132.37 107.27 129.0 82.2 19.69 22.83 89.8 128.58 95.7 104.25 201.98 97.27
79.63 120.11 88.71 12.73 44.22 35.43 60.52 48.57 99.97 180.88 24.56 21.03 115.02 46.7 178.53 50.06 125.28 92.87 46.93 87.9 137.19 148.75 13.49 23.67 61.47 106.76 27.29 432.79 178.19 288.46 264.27 166.29 206.6 336.17 160.74 361.14 256.07 176.56 242.12 153.67 10.34 31.23 169.47 364.56 164.68 163.26 510.32 271.68
80.17 104.26 69.0 24.88 20.11 33.18 27.1 26.2 73.0 138.37 7.94 6.1 136.7 93.89 179.19 56.85 77.6 265.3 68.12 79.72 98.41 128.36 81.18 64.97 129.28 97.66 40.48 324.44 212.47 200.89 223.76 139.16 180.77 238.38 198.69 314.05 218.46 169.12 245.98 132.08 45.79 52.1 116.8 252.86 150.15 164.6 348.77 160.42
39.56 46.9 30.54 9.62 36.66 24.61 31.07 25.03 35.82 57.49 1.65 1.91 39.24 23.15 74.22 15.87 27.38 51.99 24.92 35.91 41.18 53.16 29.64 18.46 30.46 17.69 8.99 163.84 140.66 115.95 107.63 43.32 84.0 129.77 112.41 112.23 113.47 66.25 118.47 59.98 5.52 10.34 71.43 115.07 80.66 66.54 183.03 73.14
24.8 32.89 15.2 4.02 7.66 11.67 10.12 7.5 40.75 33.08 9.41 11.15 25.32 10.59 51.6 18.03 18.25 45.57 17.82 35.59 38.06 46.59 11.35 30.88 34.39 18.62 16.92 175.32 154.57 79.78 64.99 32.53 41.42 97.53 77.85 98.69 71.43 29.89 90.68 39.78 5.71 9.66 38.16 72.76 31.66 27.48 194.45 47.03
19.28 47.1 23.84 19.04 16.95 15.05 9.87 11.01 28.95 48.96 1.25 1.32 45.6 32.72 62.67 20.83 37.41 52.08 18.3 35.22 41.6 35.62 14.95 11.18 27.59 26.71 15.18 149.71 96.12 92.68 84.95 39.54 70.79 113.3 62.0 119.1 93.15 70.44 117.69 51.48 9.88 13.59 50.76 102.0 71.95 73.12 117.45 71.13
44.12 99.11 58.17 19.28 18.27 21.24 28.03 29.94 111.23 118.36 8.26 5.56 69.69 37.3 110.99 51.88 79.32 62.27 49.93 75.01 92.8 91.73 37.93 19.26 48.93 41.25 26.37 293.4 183.23 193.97 184.28 117.93 162.89 227.43 121.92 210.87 171.5 119.6 190.6 112.58 12.5 21.0 119.34 191.63 145.07 115.81 316.65 117.27
45.5 43.82 42.61 15.6 52.08 28.14 33.56 27.85 44.83 85.22 2.96 2.18 38.85 21.03 86.93 11.46 48.86 59.09 37.88 60.02 78.66 81.55 21.14 32.06 40.76 21.65 15.83 197.94 134.33 110.36 120.51 70.26 103.93 167.11 105.56 140.91 128.55 70.75 107.7 62.93 6.51 10.34 71.35 122.0 85.13 70.03 215.98 84.13
126.38 149.92 93.66 26.36 84.73 130.01 111.0 97.14 105.31 257.79 6.8 5.59 191.08 103.21 264.7 84.77 167.48 180.32 94.42 140.03 207.91 184.31 110.69 56.8 120.15 88.04 59.03 625.49 434.35 414.5 395.07 159.89 317.33 474.76 279.05 460.22 390.75 258.46 425.14 225.66 25.1 38.95 248.15 382.68 290.5 248.06 680.2 265.54
83.07 86.29 58.38 52.59 35.6 53.51 56.84 46.0 98.06 64.01 1.81 2.58 37.34 27.46 76.71 42.25 84.74 94.09 40.89 58.81 75.48 60.19 65.6 47.58 43.71 41.1 15.73 125.38 85.99 90.82 79.96 34.99 60.39 74.35 63.97 76.11 75.29 68.21 74.05 45.59 6.56 8.94 50.62 83.14 58.43 66.05 116.07 60.24
25.25 25.89 19.53 5.4 13.05 20.38 22.31 19.02 25.03 46.94 0.47 0.95 32.24 16.6 65.2 22.53 59.87 35.68 43.69 52.73 65.42 59.42 83.24 9.21 19.03 10.98 6.76 117.6 53.72 93.58 60.43 30.24 60.31 90.88 31.86 92.94 74.38 63.0 95.32 52.02 4.21 7.32 46.06 142.14 71.61 62.09 137.79 58.78
20.34 16.82 9.79 2.94 12.61 35.39 33.8 33.75 25.8 30.63 3.85 3.67 11.68 5.02 43.05 14.55 15.37 4.6 15.15 26.19 31.51 27.7 8.96 2.12 7.34 2.95 2.97 111.06 53.79 78.39 42.69 39.55 46.08 69.28 15.49 110.7 33.98 24.79 43.78 40.4 1.66 3.09 23.82 121.5 44.08 21.48 115.72 29.75
119.74 147.26 77.74 25.46 59.54 77.09 75.65 68.57 117.1 124.23 1.07 0.94 71.49 29.11 156.37 54.73 122.15 50.25 67.43 121.74 172.49 158.59 46.18 10.71 25.65 8.07 3.12 560.83 356.24 363.37 314.39 124.42 286.88 371.72 170.06 357.74 290.19 180.82 405.63 238.83 9.54 31.54 224.73 391.43 268.31 167.48 575.25 237.22
24.13 21.57 12.43 4.03 7.08 36.14 29.56 28.22 19.03 27.78 0.52 0.33 15.81 3.88 32.04 11.2 19.46 22.33 21.93 18.73 24.68 23.21 0.98 19.69 13.83 7.47 2.41 82.17 58.68 44.77 46.3 18.78 35.65 48.51 29.29 56.29 54.53 24.45 36.5 17.75 1.63 1.32 18.76 69.66 30.1 24.04 90.82 23.53
27.02 25.46 23.96 14.3 16.8 18.2 18.75 20.36 23.43 21.31 1.95 2.07 15.26 9.2 23.16 14.68 31.66 27.87 21.98 24.95 34.82 33.48 22.68 26.08 22.83 16.19 7.68 46.4 43.33 34.04 34.04 19.64 30.3 42.92 27.08 50.69 32.8 24.36 31.14 21.61 6.57 8.84 19.81 31.78 27.85 23.86 39.3 23.87
39.69 53.31 24.53 5.48 33.38 28.13 16.8 16.98 42.07 58.0 1.34 1.16 39.95 21.54 59.55 23.43 49.6 49.85 32.81 49.37 63.89 52.81 71.75 9.32 27.89 17.03 21.25 153.93 122.9 98.96 110.51 50.72 87.91 127.93 70.6 130.09 108.1 65.46 124.59 70.51 8.22 12.0 67.59 100.79 81.45 61.9 157.01 62.15
135.78 152.16 118.48 71.36 20.31 33.51 23.92 14.6 210.96 229.12 12.24 9.34 140.94 76.6 229.69 139.21 168.83 165.73 140.03 268.21 282.43 245.47 151.11 31.53 139.17 52.07 67.85 810.15 657.92 474.16 450.02 205.13 354.85 678.38 432.45 674.5 422.76 333.37 622.3 275.75 35.15 69.11 272.46 461.02 275.45 314.74 783.07 381.76
25.13 33.7 14.38 7.89 5.63 13.94 16.08 11.2 18.48 31.23 8.23 13.16 18.21 9.4 37.37 13.05 30.93 15.07 9.56 22.97 22.08 19.07 9.27 4.68 9.53 9.29 3.97 104.29 52.95 56.1 43.93 8.43 41.27 70.05 37.57 67.08 44.64 39.8 61.59 27.02 2.86 5.78 32.86 61.25 39.18 37.84 81.85 31.2
23.46 30.54 39.74 6.78 18.25 25.87 24.21 20.15 30.75 48.68 3.39 5.37 31.49 18.56 49.4 23.3 38.44 30.83 51.55 45.36 60.5 50.12 16.24 13.53 27.48 24.9 18.34 85.6 27.36 56.4 52.59 39.17 43.34 58.73 22.39 70.45 50.16 48.46 47.8 33.49 16.36 21.28 35.88 53.03 43.74 48.0 92.9 39.8
18.31 18.92 11.65 3.92 15.8 16.92 14.74 10.42 11.18 26.02 4.68 3.82 17.71 7.16 28.78 21.1 29.03 19.61 18.97 18.95 20.26 16.97 8.28 8.83 16.21 9.76 8.23 74.93 51.43 44.15 42.53 32.78 39.4 60.3 47.91 58.99 46.79 23.16 41.59 25.96 7.05 6.79 26.99 45.95 31.3 23.21 78.19 36.47
46.23 68.03 30.47 14.49 5.77 31.72 28.81 27.04 48.44 175.57 9.2 7.4 103.09 39.9 152.58 33.97 49.63 99.89 41.15 49.89 69.52 85.98 23.99 20.2 71.22 53.96 34.97 385.14 292.14 269.14 270.61 148.91 219.6 276.48 166.88 351.92 248.48 150.65 204.34 122.31 9.29 16.49 110.73 293.16 152.47 147.27 450.14 133.11
57.12 98.21 61.59 17.54 28.03 54.62 53.3 43.4 60.47 184.17 10.82 11.24 91.75 58.63 199.96 50.02 106.59 80.53 82.26 124.22 134.69 110.1 126.69 35.3 86.55 53.64 49.27 483.05 200.08 327.76 250.15 133.06 202.73 323.09 152.5 347.0 201.97 181.13 298.89 178.03 36.37 50.32 175.4 362.77 161.72 175.15 563.66 248.33
5.89 18.54 22.68 4.16 18.04 14.02 15.16 17.38 12.43 44.42 0.41 0.33 19.36 9.97 43.51 4.39 22.88 16.57 23.35 30.42 32.43 28.26 20.68 3.57 13.89 3.97 3.82 219.43 101.64 116.49 102.54 61.01 101.47 164.91 47.79 171.06 99.49 46.98 127.27 56.13 2.68 7.41 58.18 112.12 83.62 45.04 240.14 75.74
63.89 66.36 49.67 22.02 13.87 24.62 23.81 21.57 70.16 111.2 2.49 2.43 86.4 36.8 108.87 32.46 70.19 60.02 47.52 58.48 77.29 74.68 51.13 20.08 35.64 47.84 16.6 308.03 215.19 192.91 187.54 79.74 154.04 232.86 161.2 230.72 212.78 130.83 196.19 97.21 6.49 12.7 97.87 189.3 128.96 130.09 313.0 90.24
23.17 20.46 18.24 11.56 20.45 21.81 41.75 25.42 21.02 54.14 2.67 2.61 28.21 15.9 44.03 14.14 51.19 52.41 43.16 39.84 42.01 37.57 45.44 34.93 39.96 28.12 13.7 145.03 81.27 80.95 83.38 37.19 68.63 101.64 35.6 105.61 72.12 35.15 87.18 40.56 7.33 10.18 44.23 83.09 52.51 34.42 214.75 55.04
133.72 168.82 118.06 32.8 33.5 130.76 98.94 94.62 134.75 121.76 8.95 9.67 143.29 109.15 154.95 84.46 132.9 108.53 79.58 112.67 139.04 115.81 44.83 52.99 64.71 105.0 43.21 204.39 153.45 158.31 141.62 86.37 124.81 170.87 125.23 172.66 183.65 162.23 249.69 141.97 33.54 39.74 139.77 198.1 159.54 160.59 234.65 131.57
11.95 42.02 26.46 12.48 50.08 29.37 37.72 26.98 28.37 158.45 1.58 1.47 68.24 25.68 144.55 12.2 28.27 36.59 44.78 58.51 63.31 82.39 26.11 21.82 43.42 17.13 17.99 406.1 271.41 190.98 220.99 99.41 178.54 318.52 172.86 351.89 179.61 107.13 241.93 91.01 11.6 15.33 91.91 202.5 116.88 105.72 432.07 156.48
46.72 83.97 77.78 26.53 15.51 21.32 27.6 21.9 30.64 51.81 1.37 1.17 32.92 14.38 56.72 48.8 60.94 44.19 40.65 73.23 85.46 69.75 53.41 8.89 23.76 17.91 6.38 129.73 77.96 83.01 64.64 33.24 55.24 99.17 51.89 119.97 64.43 63.66 95.3 36.24 1.16 3.3 38.51 82.69 48.84 62.12 129.36 56.08
26.99 31.11 18.31 5.21 7.23 22.68 18.27 20.08 31.43 62.58 7.53 6.93 58.43 31.37 59.93 16.55 38.67 37.23 27.72 32.75 39.66 44.88 11.43 12.39 34.56 44.44 20.34 129.52 106.19 85.56 99.7 57.73 90.16 119.27 91.13 113.37 105.52 62.21 93.85 72.16 19.43 23.23 73.0 106.21 80.88 59.4 162.99 69.02

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)