Heatmap: Cluster_439 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc08g075820.3.1 (Solyc08g075820.3)
-2.26 -0.96 0.27 0.15 -0.14 -0.2 1.77 0.44 -2.2 1.33 -0.58 -1.05 -0.46 0.35 -1.12 -4.47 -0.32 -4.7 -1.48 -0.29 -0.51 0.41 0.93 0.65 -0.3 -0.88 0.84 0.74 0.63 0.48 0.15 -0.11 - -0.51
Solyc08g075825.1.1 (Solyc08g075825.1)
-0.6 -0.54 0.3 -0.06 -0.1 -0.37 1.77 -0.96 -1.78 0.84 -0.46 -0.82 -0.28 0.57 -0.87 -1.47 -0.61 -3.12 -2.99 -0.51 -0.33 0.4 0.81 0.37 0.08 0.5 0.53 0.55 0.28 0.14 0.69 0.11 -2.39 -0.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.