Heatmap: Cluster_174 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- - -0.31 0.52 -3.71 -0.86 0.06 0.65 2.71 -0.35 0.3 1.21 - - -2.65 3.47 2.02 -0.82 - -0.59 - -1.02 - -2.48 -0.29 1.61 -0.29 -0.71 -0.97 0.26 -0.97 -1.76 -3.62 -1.57 -2.95 -2.75 - 0.15 -2.07 -1.25 -1.23 -0.48 - -1.12 -2.64 -0.22 -1.54 0.3
- 2.13 -2.32 0.13 -1.3 - - - 4.27 - - - - - -7.44 4.27 0.25 -1.7 - - - - - - - 0.82 - - - - - - - - - - - - - - - - - - - - - -
- 1.56 2.14 2.55 - - - - 3.62 - - - - - - 4.18 2.14 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 2.81 - - - - - - 4.38 - - - - - - 4.17 0.99 - - - - - - - - - - - - -3.67 - - - - - - - - - - - - - - - - - -
- - 1.56 1.3 - - - - 4.41 - - - - - - 3.4 2.55 -0.89 - - - - - - - 2.1 - - - - - - - - - - - - - - - - - - - - - -
- 2.92 -0.02 -0.94 -1.69 0.56 - 0.79 3.59 - - - - - -6.33 4.08 1.7 -0.03 - - - - - -2.14 - 1.0 - - - - - - - - - - - - - - - - - - - - - -
2.18 - 0.4 2.85 -4.56 -2.82 -3.32 - -0.04 -4.73 - - -3.1 - -3.78 - 1.74 0.74 1.85 1.87 2.02 2.6 -2.03 1.77 1.84 - -1.12 -2.35 -3.99 -5.1 -1.63 -3.6 - - - - - - -1.9 -3.67 -0.75 -0.74 -2.11 -2.95 -3.81 -2.31 -2.38 -1.89
- - - - - 2.43 3.49 - 4.15 - - - - - - - 2.68 - - - - - - - - 2.85 - - - - - - - - - - - - - - - - - - - - - -
- - - - 2.01 - - - 4.2 - - - - - - 2.7 3.75 - - - - - - - - 2.0 - - - - - - - - - - - - - - - - - 0.7 - - - -
- - - - - - - - 4.46 - - - - - - 4.7 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - -1.05 - - - - 3.52 - - - - - - 5.02 0.83 -1.06 - - - - - - - 0.44 - - - - - - - - - - - - - - - - - - - - - -
0.57 -0.33 -1.19 - - - -0.35 0.76 3.2 - - 1.69 0.98 - -4.15 3.81 1.83 - 0.65 - - - - - - 1.23 - - -0.65 -1.62 0.68 -0.63 -0.92 -0.83 - -0.62 - -0.6 - - - - - - - - - 0.28
- 1.44 -4.33 -0.09 -4.12 0.37 0.77 1.41 2.88 -5.9 1.86 2.66 -4.05 - -1.92 -0.56 0.97 3.03 - - - -3.6 - -0.06 -0.04 1.55 -0.08 -2.89 -0.55 -1.73 -3.13 -4.91 -5.06 -3.38 0.92 -4.75 -4.04 - - -3.86 -4.23 - -4.31 -3.8 -4.64 - - -0.85
- - 1.24 1.7 - - - - 2.87 - - - - - -2.49 4.87 2.16 - - - - - - - - 0.17 - - - - - - - - - - - - - - - - - - - - - -
- - - - -0.6 3.07 1.93 2.36 2.13 -0.21 - - - - -2.04 - 0.7 3.17 -0.68 0.35 -1.49 -0.81 1.61 -0.06 -0.28 1.4 - - -0.99 -2.03 -0.79 - -2.86 -2.16 -1.11 -0.73 -1.89 - - - - - - - - -1.96 - -1.64
- 0.28 - 0.98 -1.12 - - - 4.09 - - - - - -1.26 - 4.08 1.17 - - - - - - - 2.46 1.12 - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - 4.48 - - - - - - 3.3 3.05 - - - - - - - - 2.91 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - 4.12 - - - - - - - 2.92 4.53 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 1.06 2.5 - - - - 4.55 - - - - - - - 1.66 3.34 - - - - - - - 1.66 - - - -1.42 - - - - - - - - - - - - - - - - - -
0.66 1.73 0.66 -0.66 -2.32 -2.16 -0.68 -2.55 3.65 -0.07 -0.82 0.0 -1.34 -0.74 -1.57 3.16 0.93 0.06 - - - - - -2.34 -1.3 1.76 -2.75 - -1.5 -0.28 -2.79 -1.46 0.17 0.06 - -2.93 0.11 -1.63 - -1.41 - - -0.48 - -1.98 - -1.14 -3.49
- - 0.06 1.37 -2.28 - - - 3.08 - - - - - -3.96 4.6 1.79 0.67 - - - - - 0.84 - 2.15 - - - -5.5 - - - - - - - - - - - - - - - - - -5.42
- - -1.85 3.01 1.19 1.16 -0.04 - 2.95 -2.33 - - - 0.32 -5.26 - 0.53 - - 0.69 2.46 3.49 - -0.0 0.87 - - - 0.15 -4.44 - - - - - - - - - - - - -0.76 - - - -1.06 -2.95
- - 2.41 - -1.22 - - - 4.56 - - - - - - 3.65 2.04 - - - - - - - - 0.94 - - - - - - - - - - - - - - - - - - - - - -
- - - 1.48 -1.03 - - - 3.29 - - - - - -3.41 4.89 1.16 0.16 - - - - - - - 0.82 - - - - - - - - - - - - - - - - - - - - - -
- - 1.05 1.84 -0.02 - - - 2.51 -2.96 -1.07 0.41 - - -2.4 0.68 2.29 3.03 2.12 -1.07 -0.15 0.78 - 1.51 1.58 0.69 -3.4 -1.85 -2.36 -1.53 - -1.26 -2.55 -1.55 - -3.14 -2.85 - -2.45 - -2.62 -2.96 -2.63 -1.89 -2.56 -3.15 -2.93 -0.71
- 1.98 -0.0 - - - - - 4.01 -2.6 - - -1.09 - -1.0 3.29 -0.7 3.05 - - - -0.86 - -0.57 -1.7 1.08 - - -0.58 -3.26 0.25 - -3.86 - - - -0.59 - - - - - -1.5 -2.28 - - -1.8 -
- -0.56 0.55 -1.07 0.96 0.15 - - 2.4 -0.95 -1.7 0.27 -2.15 0.15 -1.41 3.8 1.48 -1.0 - -1.57 1.47 - - -1.25 -1.54 0.18 -2.11 -1.29 -0.88 -0.34 -0.31 -0.42 -2.7 - - -0.84 - -1.64 - 0.06 0.67 -0.58 -0.83 -0.53 - 0.43 -1.34 -2.18
- - 1.21 -1.67 -0.37 -1.54 1.93 - 3.68 -1.43 2.01 2.74 -2.83 -1.93 -3.44 0.2 1.45 0.75 2.47 0.15 - -2.0 - -1.15 -1.57 0.75 -1.26 - - -3.25 -3.53 - - - - - - - - - - -2.17 - - -2.76 - - -3.21
- 1.04 0.88 - -0.92 0.19 -0.02 -0.49 3.15 -0.82 0.11 0.14 - - -0.82 3.06 1.33 0.06 - -0.98 - 0.0 - 1.07 0.33 0.38 -0.98 0.34 -0.93 -2.7 0.72 -1.33 -0.79 -2.46 -2.41 - 0.22 -1.7 - -1.73 -1.73 -1.88 -2.24 -0.57 -2.14 -0.97 -2.04 -0.23
- - 0.62 0.79 0.44 - - - 3.91 -2.21 1.03 2.22 - - - 3.43 2.3 -1.37 - - - - - - - 2.33 - - - - - - - - - - - - - - - - -1.38 - - - - -
- 2.49 1.27 0.77 -1.93 - - - 3.97 - - - - - -5.95 3.78 1.66 -0.94 - - - - - - - 2.29 - - - - - - - - - - - - - - - - - - - - - -
- 3.85 -2.33 -1.07 - -0.98 0.6 -0.38 4.63 - - - - - - -1.11 1.33 - - - - - - - - 1.27 - - - - - - - - - - - - - - - - - - - - - -
- - - -0.83 -4.71 - - - 4.12 - - - - - - 4.6 1.94 -2.98 - - - - - -2.47 - 0.67 - - - - - - - - - - - - - - - - - - - - - -
- 3.51 0.8 0.8 - - - - 4.67 - - - - - - -0.29 1.44 - - - - - - - - 2.05 - - - - - - - - - - - - - - - - - - - - - -
- - - - -0.56 - - - 4.12 - - - - - - 2.24 4.04 -0.06 - - - - - 1.11 0.15 2.15 - - - -2.88 - - - - - - - - - - - - - - - - - -
- - -1.87 - - 2.0 - - 4.27 - - - -0.19 - - 3.67 0.35 -1.67 - - - 0.47 - - 1.46 - 0.22 - - -1.65 - - - - - - - - - -0.48 - - 1.45 - - - - -2.48
0.24 -0.12 0.28 0.54 -0.76 1.51 1.62 1.47 3.56 -0.99 -0.29 1.4 -1.37 -1.42 -1.65 - 0.17 - 3.01 -0.42 -0.19 -1.88 -0.85 - -1.45 -0.34 - - -3.81 -1.97 -2.72 -1.88 -5.26 - - -3.19 - -2.02 - -0.88 -1.89 -3.04 -1.17 -1.3 -2.29 -1.83 -1.32 -0.88
- - -1.35 2.5 - 1.22 -2.83 1.19 3.51 - - - - - -4.76 4.39 1.1 -1.66 - - - - - -1.65 - 0.99 - - - - - - - - - - - - - - - - - - - - - -
- 0.19 2.26 4.13 - - - - 3.71 - - - - - - - 3.23 0.02 - - - - - - - 0.02 - - - -3.06 - - - - - - - - - - - - - - - - - -
-3.5 2.63 0.99 2.39 -3.57 -2.64 - - 2.92 - -2.57 - -3.15 - -3.63 4.11 1.91 0.06 - - - - - -3.04 - 1.91 - - - - - - -3.91 - - - - -3.43 - - - - -3.2 -3.0 - - - -5.19
- - 2.06 - - -0.33 0.92 -1.73 3.77 - - - -0.93 -1.81 -2.86 - -2.71 -2.08 3.7 0.74 1.35 -4.53 - -1.5 -1.8 0.76 - - - -0.73 -1.78 - - -0.32 -1.83 - -2.76 0.33 - -2.65 0.96 - -1.74 - - -1.75 -3.17 -
- - -1.9 1.12 - - - - 3.75 -0.27 - - - - -4.32 2.57 0.72 3.55 - -0.17 - - - - 0.77 1.87 -0.59 -1.09 -1.73 - -0.73 -1.49 -1.37 - - -1.11 -1.27 -0.78 - -1.41 - -0.05 - - - - - -2.94
- 4.16 -1.0 0.61 - - - - 4.19 - - - - - - -1.43 2.32 1.05 - - - - - - 0.4 0.03 - - - -3.55 - - - - - - - - - - - - - - - - - -
- -0.34 - 3.86 -2.72 - - - 3.53 - - - - - - 3.28 2.47 - - - - - - - - 2.51 - - - - - - - - - - - - - - - - - - - - - -
- 3.29 - 1.68 -2.28 - - - 4.11 - - - - - -5.19 2.91 2.2 -1.18 - - - - - - -1.57 2.21 - - - - - - - - - - - - - - - - - - - - - -
- - -1.74 - - - - 0.09 2.43 -2.43 0.79 2.44 -0.59 - -1.69 4.77 0.32 -1.12 - - - - - - - - - - - -1.43 - - -0.98 - - - - - - - 0.82 - - - -1.18 -1.27 - -0.94
- - - - - - - - 4.41 - - - - - - 3.18 1.3 - - - - - - - - 3.92 - - - - - - - - - - - - - - - - - - - - - -
- 3.05 - - - - - - 4.25 - - - - - - 3.49 3.24 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 1.04 - - - 4.35 - - - - - - 4.41 2.14 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 1.98 -3.3 2.58 -1.0 -0.69 1.31 -2.73 2.39 - 1.98 2.03 - - -5.36 3.93 0.33 -1.86 - - - - - - -3.57 0.76 -1.36 -1.86 -1.41 -4.26 - -1.09 -6.06 -4.42 -2.0 - - -3.09 - -4.29 - - -2.73 - -3.62 - - -3.45
- 0.76 1.32 0.06 -3.52 - -1.69 -1.52 2.19 - -0.16 -12.21 -2.85 -3.25 -2.88 4.21 0.63 2.68 1.23 - -0.35 - - - -0.22 0.53 -0.38 - - -1.28 - - - - - - - - - - 1.16 -0.16 - - - - - -
- 0.76 1.32 0.06 -3.52 - -1.69 -1.52 2.19 - -0.16 -12.21 -2.85 -3.25 -2.88 4.21 0.63 2.68 1.23 - -0.35 - - - -0.22 0.53 -0.38 - - -1.28 - - - - - - - - - - 1.16 -0.16 - - - - - -
- - 0.79 - 1.26 1.84 0.42 -0.33 3.66 - - - -2.11 - -2.56 - 2.92 1.29 - -1.53 0.13 1.21 - 2.63 -2.17 1.64 -2.07 - - -2.8 - - -3.66 -2.02 - - - -1.6 - -0.92 - - -1.8 - - - - -
- 2.71 -0.05 0.2 - - - - 4.13 - - - - - -6.91 4.11 1.16 -2.75 - - - - - - - 1.08 - - - -4.97 - - - - - - - - - - - - - - - - - -
- 1.18 0.53 -0.96 - -2.37 - - 2.32 -1.55 0.75 0.57 -1.86 -2.99 0.04 4.23 1.48 1.85 - - - -3.0 - - -2.19 1.88 -1.06 -0.43 -1.71 -1.36 -2.36 -3.16 - -2.78 - -2.03 - - - -1.66 - - - -1.34 -3.03 - -0.93 -1.08
- - - 3.97 - - - - 5.02 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - -0.13 - - - - 4.17 - - - - - -3.98 4.55 2.49 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 1.65 - - - - - 4.24 - - - - - - 4.61 - - - - - - - - - 0.66 - - - - - - - - - - - - - - - - - - - - - -
-3.29 -1.64 1.21 0.96 1.37 - - - 2.99 -0.19 - - -2.28 - -1.59 2.55 1.06 -0.74 - -0.34 - -1.7 - -0.19 0.76 1.64 - -0.82 -1.35 -1.71 - - -1.92 -1.93 - -2.84 -0.46 1.86 - 0.77 -1.32 0.48 0.21 0.02 -1.19 1.63 -3.21 -1.19
- - - 4.17 -1.17 - - - 4.62 - - - - - - 1.5 0.69 - - - - - - -0.88 - - - - - - - - - - - - - - - - - - - - - - - -
- - 0.99 1.39 -1.63 -1.16 - 1.23 3.5 -1.44 - - - -2.85 -2.72 2.7 0.66 -0.11 2.53 0.15 0.8 -2.01 -2.11 -2.02 -2.14 0.38 -0.45 -1.87 - -1.6 -2.47 -1.63 -2.73 -0.88 - - -0.8 0.89 -2.19 -0.76 -2.63 -2.97 -1.71 -1.52 -1.56 -0.35 - -0.83
- 3.58 -0.38 -0.19 - - - - 4.56 - - - - - - - 2.91 - - - - - - - - 1.74 - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.