Heatmap: Cluster_153 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc00g154480.2.1 (Solyc00g154480.2)
- - - - - 3.65 - 2.65 3.12 - - - - - - - - - -0.18 - - - - -1.49 - - -0.65 - 0.92 - -0.66 - 1.05 -
Solyc01g005380.2.1 (Solyc01g005380.2)
0.98 0.98 -0.43 -0.53 - 3.44 - - 0.99 - - -1.67 - -1.67 - - - - - - - 0.74 -0.19 -0.95 -2.25 -1.15 -0.46 -0.13 0.04 - -1.38 -1.73 0.34 2.76
Solyc01g014531.1.1 (Solyc01g014531.1)
- - - - - 2.7 - - - - - - - - - - - - - - - - - - - - - - - - 4.78 - - -
Solyc01g015000.3.1 (Solyc01g015000.3)
- - - -2.97 2.42 2.93 -2.06 -2.95 0.5 -1.08 2.45 - -4.04 - -1.44 -2.0 - -0.01 1.02 1.29 0.89 -2.87 -3.9 -3.73 -0.8 -3.58 -1.62 -1.87 1.36 - -2.45 -0.55 -4.48 -3.03
Solyc01g021610.1.1 (Solyc01g021610.1)
- - - - - 3.63 - - - - - - - - - - - - - 4.44 - - - - - - - - - - - - - -
Solyc01g066580.2.1 (Solyc01g066580.2)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc01g066680.3.1 (Solyc01g066680.3)
-7.99 - - - -7.3 3.67 - 1.23 2.02 0.82 -7.19 - - -8.57 -3.32 -4.59 -3.28 - -9.04 - -4.0 -7.79 -8.22 -7.75 -8.53 - - -8.21 -7.34 -7.02 -7.45 - 3.67 -6.09
Solyc01g067440.3.1 (Solyc01g067440.3)
1.07 - -7.06 - 0.63 0.85 - 0.57 -1.51 2.02 -3.57 -2.84 - - -2.99 -2.3 -1.66 - - 0.85 -0.67 -1.58 -4.93 -2.38 -1.5 3.09 -3.91 -3.65 -2.71 -1.26 -2.18 0.55 2.21 1.52
Solyc01g095220.2.1 (Solyc01g095220.2)
0.98 -0.34 -0.32 0.05 0.94 1.75 0.1 0.36 -1.58 2.39 1.03 0.09 1.17 0.85 0.42 0.27 0.45 -4.18 -3.94 -2.13 -6.35 -6.0 -5.39 -6.86 -7.0 1.05 - -7.19 -7.83 -6.6 -6.29 -5.76 0.85 -0.32
Solyc01g099740.3.1 (Solyc01g099740.3)
-0.77 0.09 -0.23 -0.42 0.85 0.23 -0.08 0.31 -0.22 -0.1 -0.05 0.16 -0.01 0.06 -0.05 -0.24 -0.38 -10.37 -13.44 -0.74 -0.71 0.34 0.31 0.26 0.2 -0.69 0.58 0.46 0.32 0.48 0.46 0.65 -0.95 0.53
Solyc01g109200.3.1 (Solyc01g109200.3)
0.6 -2.15 -3.34 -2.86 1.14 -0.09 0.7 -1.62 0.29 -0.33 -0.37 -0.91 2.41 1.83 0.13 -0.06 -0.39 -9.39 -8.78 -0.41 0.24 -1.65 -1.69 -1.41 -1.32 0.01 -0.21 0.21 0.68 -1.42 -1.56 -1.34 -1.3 1.28
Solyc01g109210.2.1 (Solyc01g109210.2)
-0.65 -2.72 -3.48 -2.63 -0.17 0.18 0.54 -2.98 -0.22 0.06 0.42 -0.2 3.16 2.24 0.14 -0.22 -0.76 - -5.45 -0.75 0.68 -3.67 -3.5 -2.59 -2.54 -2.49 -1.51 -0.95 -0.45 -2.06 -2.7 -2.7 -1.14 1.82
Solyc02g043963.1.1 (Solyc02g043963.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc02g063125.1.1 (Solyc02g063125.1)
-2.62 -3.14 - -1.96 0.03 3.8 0.88 -1.43 0.55 -0.93 -0.03 0.3 -0.09 -0.86 -0.38 - -3.07 -2.77 -2.7 - - -0.32 0.41 -0.18 -0.22 - -0.59 -0.09 -1.07 -0.1 0.69 -0.79 - -1.42
Solyc02g068365.1.1 (Solyc02g068365.1)
0.35 -0.14 -1.36 -0.76 1.36 0.99 0.71 -1.08 -0.43 0.13 0.16 0.47 0.72 0.6 -0.09 -0.21 -0.15 0.4 0.8 0.05 0.27 -0.75 -0.55 -0.52 -0.52 0.08 -0.71 -0.53 -0.4 -0.75 -0.73 -0.62 -3.23 -0.14
Solyc02g079910.2.1 (Solyc02g079910.2)
- - - - 1.87 3.13 - 0.94 3.79 - - - - - - - - 1.54 - - - -0.16 - - - - - - - - - - 1.0 -
Solyc02g093260.1.1 (Solyc02g093260.1)
- - - - - - - - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - -
Solyc03g044820.3.1 (Solyc03g044820.3)
-4.29 -2.17 - - -4.36 2.78 -4.54 1.53 0.63 1.09 0.2 0.3 -0.08 -0.18 0.16 0.21 0.28 -6.65 - -0.57 -1.38 -0.17 -0.09 -0.17 0.74 0.1 -0.69 -0.43 0.2 -0.62 -0.56 -0.65 0.57 -7.05
Solyc03g059243.1.1 (Solyc03g059243.1)
-2.6 - - - 4.67 2.38 - - - 0.92 - - - - - - - - - -3.09 - -3.54 -2.18 -3.18 - - -2.98 -2.53 -3.07 - - - - -2.07
Solyc03g096385.1.1 (Solyc03g096385.1)
- - - - - 1.08 - - - - - - - - - 4.99 - - - - - - - - - - - - - - - - - -
Solyc03g096645.1.1 (Solyc03g096645.1)
- 3.22 - - - - 0.35 - 2.35 3.15 - - - - - - - - - - - 1.29 - -0.34 - - 1.34 1.23 0.4 - - - - -
Solyc03g121420.3.1 (Solyc03g121420.3)
-0.17 0.86 1.19 -0.17 2.03 1.61 -6.78 1.7 -1.89 -3.62 -3.47 -4.39 -4.97 -2.72 -5.17 -4.92 -4.88 0.97 - -4.03 -2.69 -0.41 -3.26 -2.07 -1.84 -3.63 -0.78 -0.98 -1.74 0.37 -0.15 0.45 2.05 2.09
Solyc04g049100.1.1 (Solyc04g049100.1)
- 0.24 1.6 - - 2.47 - - - 0.13 - - - -0.81 - - - - - - 0.25 -0.32 1.3 1.58 1.71 - -0.59 1.2 -1.57 1.27 1.86 1.07 -1.13 -
Solyc04g049260.1.1 (Solyc04g049260.1)
- - -1.85 - -0.47 3.49 0.39 - 0.41 - - -4.21 - - -3.35 -1.9 -3.68 - - 0.3 0.63 0.18 -0.11 0.11 0.7 -3.3 -0.52 1.06 1.02 0.47 0.97 0.51 -0.12 -1.06
Solyc04g076840.1.1 (Solyc04g076840.1)
- - - - - 3.79 - - - - - - - - - - - - - - - - - - - - - - - - - - 4.33 -
Solyc04g078145.1.1 (Solyc04g078145.1)
0.33 0.15 -0.07 -0.14 -2.17 0.83 0.42 -0.12 0.28 0.02 0.87 0.69 0.55 0.72 0.11 -0.23 -0.12 - -10.92 0.75 0.98 -0.35 -0.58 -0.41 -0.51 -0.42 -0.28 -0.27 -0.23 -0.08 -0.14 -0.3 -0.81 -0.3
Solyc04g078390.2.1 (Solyc04g078390.2)
0.16 -2.1 -0.83 -0.84 -0.46 0.25 -0.43 -1.42 -0.03 -0.35 0.88 0.86 2.19 1.99 0.11 0.3 0.04 -10.09 -9.92 0.7 -0.18 -1.29 -1.26 -1.3 -1.6 -0.77 -0.55 -0.5 -0.46 -0.9 -0.98 -1.06 -1.29 1.32
Solyc05g006250.1.1 (Solyc05g006250.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc05g007830.3.1 (Solyc05g007830.3)
-0.58 -0.96 -0.47 -1.45 -1.72 2.2 2.18 0.87 -0.0 0.32 -2.32 -3.32 1.02 0.05 -4.37 -7.93 -6.82 - - -10.51 -2.27 0.75 0.44 0.62 0.52 -8.12 0.18 -0.24 -0.9 0.61 0.85 -0.01 -0.09 -0.35
Solyc05g010250.2.1 (Solyc05g010250.2)
1.49 -2.47 -1.41 -0.86 -0.38 2.33 -0.56 -1.6 -1.53 -0.47 0.05 0.22 1.0 0.82 0.14 0.67 0.24 -3.44 -4.69 -0.13 -3.09 -0.13 -1.27 -0.31 0.26 -3.72 -0.99 0.18 0.22 -0.1 0.14 0.29 -0.01 -0.46
Solyc05g024245.1.1 (Solyc05g024245.1)
-0.3 -0.58 -0.11 -0.32 0.24 0.76 0.07 -0.22 -0.05 -0.07 0.3 0.12 -0.08 -0.21 -0.32 -0.4 -0.59 -6.99 -7.48 0.57 -0.27 0.02 0.32 0.16 0.17 0.59 0.49 0.26 0.19 -0.05 -0.04 -0.15 0.75 0.17
Solyc06g050445.1.1 (Solyc06g050445.1)
- - - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc06g053700.1.1 (Solyc06g053700.1)
-2.39 0.49 -2.38 -1.52 0.39 0.19 0.56 -0.99 0.18 0.15 0.87 1.88 1.25 2.12 0.59 0.63 0.69 0.02 1.11 -1.05 -1.19 -1.98 -1.88 -2.2 -2.29 -1.36 -1.29 -1.38 -1.34 -1.71 -1.6 -2.12 -1.42 -1.25
Solyc06g060790.1.1 (Solyc06g060790.1)
0.24 0.05 -0.43 -0.43 -0.82 0.72 -0.67 0.22 -0.37 -0.84 0.61 0.47 0.54 0.25 -1.04 -1.39 -1.12 -8.29 -8.8 0.53 -0.16 0.32 -0.09 0.16 0.31 -0.01 0.25 0.41 0.31 0.5 0.37 0.41 0.58 -0.13
Solyc06g067975.1.1 (Solyc06g067975.1)
-0.63 -0.99 0.06 -0.7 0.67 1.08 -0.55 0.01 -2.26 1.26 0.66 0.75 1.24 0.98 0.44 0.5 0.61 -2.88 -2.3 0.01 -0.6 -0.89 -1.07 -0.82 -0.7 1.0 -1.37 -0.47 -0.45 -0.35 -0.59 -0.36 -1.06 -0.9
Solyc06g071925.1.1 (Solyc06g071925.1)
1.72 3.93 - 2.28 -0.53 2.32 - 0.08 -0.36 - - - - - 0.88 - - - - - - - - - - - - - - - - - 0.27 -
Solyc06g072925.1.1 (Solyc06g072925.1)
- - - - - 1.91 - - 1.61 3.56 - - - - - - - - 3.46 - - - 1.72 0.14 - - - - - - - - - -
Solyc06g074240.2.1 (Solyc06g074240.2)
-0.3 -1.35 0.07 -0.54 1.73 0.85 0.15 -0.64 0.2 0.29 -0.07 0.12 0.36 0.32 0.09 -0.16 -0.07 -8.19 -9.83 -0.12 -0.22 -0.38 -0.64 -0.49 -0.44 0.9 -0.3 -0.23 -0.1 -0.41 -0.45 -0.03 -0.18 0.91
Solyc06g082140.3.1 (Solyc06g082140.3)
-1.46 1.47 -0.98 0.43 -1.36 1.21 -0.26 0.23 -5.43 0.32 2.26 2.36 2.19 2.28 -1.09 -1.83 -1.72 -10.08 -10.7 -3.85 -8.98 -5.55 -6.52 -5.95 -5.88 -2.15 -6.61 -5.64 -5.75 -5.95 -4.73 -5.58 0.45 -0.37
Solyc07g019577.1.1 (Solyc07g019577.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc07g052065.1.1 (Solyc07g052065.1)
-0.09 - -0.8 - 1.13 3.0 - -0.88 -0.81 1.31 0.95 1.58 3.12 1.12 - - - - - - 0.31 - - - -2.7 - - -0.87 -0.11 - - - - -
Solyc07g052203.1.1 (Solyc07g052203.1)
-6.44 - -8.54 - -1.91 3.44 3.18 0.31 -0.1 -0.48 -0.87 -0.92 -6.45 -7.64 -0.82 -4.65 -3.89 - - -4.12 -1.74 -4.21 -0.26 -2.46 -4.14 -3.92 -6.01 -5.61 -5.74 -5.89 -2.7 -6.66 2.84 -2.32
Solyc08g005755.1.1 (Solyc08g005755.1)
- - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc08g014020.3.1 (Solyc08g014020.3)
-0.82 1.97 0.25 2.17 -0.7 0.97 -0.86 - - 0.71 - -2.27 -3.24 -2.96 -0.38 0.67 -1.86 -0.86 -1.06 -1.31 -2.1 -0.25 0.5 -0.85 0.68 -1.6 0.22 -0.25 0.87 -0.5 0.77 0.81 -3.11 0.54
Solyc08g065745.1.1 (Solyc08g065745.1)
- - - - 2.61 3.14 - - 4.25 - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc08g068880.1.1 (Solyc08g068880.1)
0.48 -1.77 0.37 -0.77 0.3 -0.21 0.37 -1.23 0.19 -0.28 0.07 -0.19 1.44 0.45 0.16 0.24 0.57 -2.01 -2.23 -0.68 -0.22 -0.11 -0.37 -0.27 -0.34 -0.68 -0.08 0.22 0.32 0.12 0.07 0.02 -0.66 0.89
Solyc08g076885.1.1 (Solyc08g076885.1)
0.6 - -3.79 -8.63 -2.87 2.35 -9.19 -0.69 -1.87 2.07 -3.4 -3.02 -10.07 -10.97 0.35 0.79 0.51 -10.85 -12.88 -0.84 1.83 -1.82 -1.03 -1.21 -1.21 -11.47 -1.63 -2.37 -2.94 -1.54 -1.49 -0.43 -2.36 3.23
Solyc09g008350.3.1 (Solyc09g008350.3)
0.28 -2.43 -2.76 -3.8 -0.55 0.43 -0.56 -1.22 -0.86 0.0 0.35 0.54 2.26 2.35 -0.35 -0.42 -0.03 -12.33 -9.03 -2.67 -0.14 -0.38 -1.24 -0.58 -0.61 -2.12 0.22 0.43 0.69 0.05 0.07 0.06 -1.37 0.17
Solyc09g061830.1.1 (Solyc09g061830.1)
0.55 -0.21 0.0 -0.44 - 2.1 1.38 -1.03 -0.05 -1.39 -0.63 0.74 -0.08 0.66 -1.09 -0.26 -0.74 - - -0.2 -0.07 -0.38 -0.61 -0.35 -0.17 -1.57 -0.04 -0.16 -0.18 -1.23 -0.04 -0.73 1.01 1.28
Solyc09g064170.1.1 (Solyc09g064170.1)
-1.69 -1.35 2.33 0.54 -1.81 1.98 -1.2 -3.68 0.85 -4.86 -4.0 -4.76 -4.56 -4.63 -5.24 -5.25 -5.04 - - 1.11 2.69 -1.14 -1.41 -0.78 -0.62 - -0.91 -0.5 0.15 -1.09 0.24 0.8 1.01 0.6
Solyc10g044643.1.1 (Solyc10g044643.1)
-1.75 -0.26 -0.21 0.56 -2.88 0.47 -0.01 -0.07 -1.42 0.33 0.44 -0.33 0.88 0.57 0.46 0.44 0.46 - -6.62 -0.04 0.57 -0.25 0.62 0.27 0.08 0.49 0.69 0.47 0.09 -0.23 -0.29 -0.21 -1.45 -1.48
Solyc10g050080.2.1 (Solyc10g050080.2)
- - 3.88 - - 2.75 - - - - - - - - - - 2.31 - - - - - - - - - - - 1.37 - - 2.32 - -
Solyc10g074360.1.1 (Solyc10g074360.1)
1.63 - - - 3.32 3.47 - - - - - - - - - - - - - 1.71 - - - - - - - - - - - - - 2.73
Solyc10g076170.1.1 (Solyc10g076170.1)
- - - - -1.16 4.51 -2.03 - - - - - - - - - - - - 1.57 1.97 - - -1.82 -0.8 - -1.15 -1.32 0.28 - - -0.6 - -
Solyc11g005160.1.1 (Solyc11g005160.1)
4.35 - - - - 3.76 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc11g013295.1.1 (Solyc11g013295.1)
-1.59 0.67 0.75 0.96 - 2.14 2.35 -1.39 -0.27 0.77 -3.4 - -3.94 -4.99 -0.8 -1.81 -4.01 - - -0.4 -0.7 0.4 -0.61 -0.38 -0.45 -2.03 -0.15 0.28 -0.15 0.34 0.92 0.52 -1.78 0.93
Solyc11g021160.1.1 (Solyc11g021160.1)
-2.53 -2.96 -2.46 -2.89 -0.74 2.36 1.43 -1.63 -0.33 - -6.88 -6.93 -4.96 - 0.52 -0.8 -1.41 - - 1.17 -0.57 -0.67 -1.65 -0.84 -0.77 -5.86 0.04 -0.05 -0.85 -0.93 0.18 0.07 3.34 -0.07
Solyc11g044636.1.1 (Solyc11g044636.1)
0.84 - - - 1.21 1.63 - -1.61 -0.26 - - - - -2.65 -1.82 -0.04 -1.43 - - 2.41 1.88 - -0.46 -0.06 -0.42 - 0.47 0.22 -0.16 -1.8 0.73 0.89 2.1 -0.16
Solyc12g036250.2.1 (Solyc12g036250.2)
0.39 -0.07 0.08 -0.01 -0.55 0.44 0.38 0.23 -0.2 -0.36 -0.66 -0.78 -0.59 -0.65 0.53 0.47 0.29 -4.02 -4.47 -0.73 -0.73 0.35 -0.05 0.06 0.04 -0.13 0.31 0.41 0.4 0.47 0.37 0.42 0.11 0.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.