Heatmap: Cluster_530 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc05g052300.3.1 (Solyc05g052300.3)
0.72 -7.35 2.04 1.05 1.66 1.89 -4.16 2.04 1.66 1.21 -0.8 -1.55 0.21 -1.13 -0.88 -0.22 -0.39 - - - -3.68 -2.79 -2.28 -2.74 -2.83 -5.9 -2.26 -2.85 -2.19 -2.14 -2.14 -2.66 -0.43 1.21
Solyc05g054740.3.1 (Solyc05g054740.3)
0.28 -1.74 1.91 0.13 0.07 1.06 -0.54 1.05 0.97 0.63 -0.79 -1.62 0.43 -1.04 -0.74 -0.22 0.11 -2.25 -1.92 -0.44 -0.34 -0.31 -0.14 -0.44 -0.77 0.12 -0.03 -0.32 -0.72 -0.28 0.1 -0.83 -0.54 0.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.