Heatmap: Cluster_385 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g107260.3.1 (Solyc01g107260.3)
-0.66 1.05 -1.67 -0.31 1.4 -0.34 1.5 0.38 1.51 -1.8 -0.88 1.14 -2.12 0.89 -2.45 -3.09 -3.52 -1.57 -6.39 - -3.53 -0.52 1.19 -0.34 -1.75 - 1.39 -0.02 -1.01 -0.51 0.63 -1.39 -4.07 1.57
Solyc07g064030.3.1 (Solyc07g064030.3)
-0.62 1.46 -1.04 -0.2 0.34 0.05 1.6 0.91 1.26 -0.62 -0.32 0.48 0.29 1.0 -0.56 -1.06 -1.25 -1.57 -2.41 -4.27 -2.06 -0.51 0.35 -0.44 -1.35 -4.48 0.76 -0.18 -0.91 -0.27 0.41 -1.16 -2.94 1.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.