Heatmap: Cluster_132 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc00g006680.2.1 (Solyc00g006680.2)
-2.89 0.24 1.54 0.35 -1.19 -1.43 3.18 -4.11 -3.18 - -3.67 -4.75 -5.16 -3.98 1.59 0.74 1.8 - -3.35 2.37 -0.07 -2.51 - -4.39 -3.74 - -4.93 -3.02 -1.21 - -1.42 0.17 -2.57 0.43
Solyc00g009760.2.1 (Solyc00g009760.2)
-4.66 0.51 1.57 1.69 -4.05 -2.77 2.38 -6.39 -0.41 -6.96 -3.84 -4.76 -6.04 -4.23 -0.52 -1.24 -0.47 -6.57 -1.8 1.21 -2.23 -0.39 -1.28 -0.31 -0.22 -4.27 -1.01 -0.04 0.89 -1.25 0.12 2.03 1.73 -2.41
Solyc00g011150.1.1 (Solyc00g011150.1)
-1.87 0.67 1.63 1.78 -2.76 -1.44 3.52 -4.19 -2.97 -5.04 -2.91 -3.11 -5.03 -2.94 1.84 0.85 1.79 -4.61 -1.71 -1.93 -5.28 -3.28 -3.75 -2.89 -2.86 -1.87 -3.78 -2.69 -1.7 -3.94 -2.46 -0.5 -4.92 0.29
Solyc00g011170.1.1 (Solyc00g011170.1)
-0.39 -7.61 1.65 -5.9 -4.62 -4.52 3.35 -7.58 2.4 -4.38 -1.39 -7.73 -9.18 -6.84 0.18 -0.68 0.18 -9.75 -3.27 2.71 - - -1.76 -8.16 -8.72 -8.5 -0.61 -7.15 -4.84 -10.6 -9.25 -6.13 1.83 -7.53
Solyc00g068980.2.1 (Solyc00g068980.2)
-3.7 -1.06 -0.21 0.11 -4.39 -4.62 0.75 -4.39 -1.43 -5.91 -8.42 -9.82 -12.33 -8.52 -0.37 -1.05 -0.32 -6.02 -3.05 4.13 1.85 -1.15 -2.05 -1.33 -0.85 -3.73 -1.66 -1.05 -0.3 -2.25 -1.59 0.76 -1.7 -3.4
Solyc01g017200.2.1 (Solyc01g017200.2)
-3.31 -2.98 -0.97 -1.13 - -1.89 0.16 - 0.95 - - - - - -3.39 - -1.67 - - 1.39 1.39 0.66 0.38 0.48 0.93 - 1.26 0.3 0.91 0.03 1.11 1.62 0.39 2.2
Solyc01g017270.1.1 (Solyc01g017270.1)
- - - 0.03 - -1.68 -0.89 - 2.42 - - - - - - - - - - 1.35 0.99 0.9 1.07 1.2 0.62 - 1.3 1.29 0.64 - - 2.72 - 0.49
Solyc01g017360.2.1 (Solyc01g017360.2)
- - - - - -5.83 -0.5 - 1.83 - - - - - - - - - - 0.77 1.05 -0.26 0.46 0.92 1.12 - 1.81 0.99 1.46 1.52 1.42 2.09 -0.65 -0.0
Solyc01g017370.1.1 (Solyc01g017370.1)
- -2.15 - -2.11 - -4.0 -3.83 - 1.84 - - - - - -2.33 - -2.03 - - 0.12 0.32 1.28 1.04 0.91 1.14 - 1.78 1.16 1.59 -0.37 1.7 2.24 -1.25 -0.71
Solyc01g017470.2.1 (Solyc01g017470.2)
- - - - - -1.63 0.85 - -0.61 - - - - - - - - - - 0.89 1.43 1.31 1.31 0.08 1.47 - 1.46 1.4 1.29 1.44 0.07 2.58 -1.86 -
Solyc01g056670.1.1 (Solyc01g056670.1)
- -2.47 -0.4 -0.29 - -4.44 1.63 - 1.14 - - - -3.69 - -2.66 - -2.45 - - 1.59 1.68 0.63 0.62 -0.21 0.27 - 0.93 0.83 0.94 -1.66 1.12 2.17 -0.26 0.76
Solyc01g058500.3.1 (Solyc01g058500.3)
-4.93 0.04 1.09 1.24 -5.43 -3.77 2.26 -6.76 -0.07 -5.68 -1.93 -3.92 -4.12 -3.47 -1.32 -2.3 -1.18 -7.5 -3.14 1.65 -1.24 -0.58 -0.23 0.26 0.31 -6.51 0.13 0.53 0.93 -1.31 -0.03 2.29 1.25 -1.62
Solyc01g060160.1.1 (Solyc01g060160.1)
0.02 - -1.07 - -0.19 -1.28 1.12 -2.19 0.36 -1.89 0.47 1.12 1.17 1.55 -3.59 0.42 -1.54 - - -0.28 1.63 0.72 0.44 0.27 -0.15 0.05 0.37 0.1 -0.29 -0.88 -0.47 1.03 -4.49 -2.69
Solyc01g086953.1.1 (Solyc01g086953.1)
-1.84 -1.5 - -2.94 -0.08 -1.3 -1.72 - 1.62 -3.05 0.13 1.65 1.68 0.23 -0.93 -1.97 -1.65 - - 1.06 0.85 0.15 0.93 0.54 0.25 - 1.2 0.91 0.24 -0.18 0.41 0.5 - -2.52
Solyc02g014777.1.1 (Solyc02g014777.1)
- - -1.39 -1.48 -1.62 -1.89 -0.27 - 0.04 - - - - - -1.72 - -1.65 - - 1.59 0.42 0.74 0.95 0.07 0.08 - 0.83 1.5 1.44 -1.24 1.47 2.6 0.57 1.04
Solyc02g014780.1.1 (Solyc02g014780.1)
- -0.57 - - 0.97 -0.69 -0.48 - - - - - - - - - 0.63 - - 3.06 1.62 0.37 0.07 -0.29 -1.37 - 1.45 -0.45 0.89 -0.81 -0.25 2.25 0.13 -0.11
Solyc02g014790.1.1 (Solyc02g014790.1)
- -0.31 - - 0.03 0.76 -2.17 - 0.23 - - - - - -0.57 - - - - -0.31 0.65 0.05 - 0.29 -1.05 - 1.42 0.98 -0.25 0.72 1.66 2.19 2.64 1.13
Solyc02g021390.1.1 (Solyc02g021390.1)
- 0.92 - 0.96 - - 2.89 - - - - - - - 0.74 - - - - - 1.65 - 0.4 0.36 1.26 - 0.46 1.37 1.22 - 0.11 2.31 - -0.68
Solyc02g083200.3.1 (Solyc02g083200.3)
1.15 -2.47 -1.49 -1.8 -0.44 -0.91 0.12 -2.6 0.73 1.3 -1.57 -2.42 -3.19 -2.76 0.02 -0.7 0.06 -3.74 -4.01 1.57 2.21 -0.79 0.03 -0.08 -0.37 -2.27 0.31 0.21 0.35 -0.97 -0.17 0.72 0.55 0.5
Solyc02g086463.1.1 (Solyc02g086463.1)
- - - -0.92 -0.77 -2.11 - - - 0.41 - - - - - - - - - 2.97 2.9 -0.13 - -0.21 0.11 1.81 -2.24 0.51 -0.25 0.89 -0.49 2.03 - -0.83
Solyc03g007300.2.1 (Solyc03g007300.2)
- -2.39 0.8 -0.16 -0.08 -1.22 1.23 - 1.8 -2.49 - - -3.64 -3.27 -0.59 -2.79 -1.26 - - 2.15 1.85 -1.71 0.93 0.73 -0.13 -2.6 0.62 0.46 -0.1 0.19 -0.04 1.48 -3.82 -0.79
Solyc03g063480.2.1 (Solyc03g063480.2)
-0.56 -2.09 -0.87 -1.01 0.01 -1.73 0.32 -2.54 2.46 -0.42 -3.09 -3.66 -4.34 -3.68 0.85 0.04 0.76 -4.27 -4.7 1.24 1.26 -0.52 -0.67 -0.37 -0.31 -3.0 -0.44 -0.42 0.26 -1.01 0.17 1.03 0.1 1.55
Solyc04g024560.2.1 (Solyc04g024560.2)
- -2.19 -1.8 -0.06 - -1.95 0.46 - -1.21 - - - -3.41 - -1.53 - -3.27 - -3.53 -0.26 0.32 -0.29 1.89 0.35 0.74 - 1.93 1.77 1.15 0.53 0.77 2.64 -1.85 0.26
Solyc04g039820.2.1 (Solyc04g039820.2)
-1.84 -2.67 -0.87 -1.2 1.77 1.15 -1.6 -2.45 -0.3 - -5.63 - -5.78 - -0.43 -0.53 -0.44 - - 1.71 2.12 0.42 -0.18 -0.25 0.04 - -0.17 0.04 0.23 -1.41 -0.05 0.8 -1.03 2.35
Solyc04g039830.2.1 (Solyc04g039830.2)
-1.18 -2.54 -1.34 -1.97 1.11 0.43 -1.36 - -0.07 - -2.76 -2.82 -2.96 -3.27 0.91 0.81 0.53 - -6.03 1.12 2.01 -1.05 -0.43 -0.76 -0.79 - 0.06 -0.83 -0.6 -1.83 0.16 0.36 -0.95 3.04
Solyc05g014167.1.1 (Solyc05g014167.1)
-2.44 -2.56 - - 1.17 -0.23 0.26 -2.49 -0.48 0.15 1.28 1.47 2.66 1.99 -0.54 -0.79 -0.51 - - -0.43 0.22 -0.27 -1.09 -0.94 -1.6 -0.82 -0.04 -1.0 -1.22 -0.98 -0.97 0.51 - -0.15
Solyc05g015225.1.1 (Solyc05g015225.1)
-1.62 - -1.45 -0.96 -0.95 -0.24 -0.53 - -2.55 - 2.06 1.85 1.72 2.45 -1.42 -1.13 -2.28 - - 1.09 1.66 -0.19 -0.46 -0.97 -2.49 -3.29 - -1.37 -1.06 -0.85 -1.15 -2.14 -4.05 1.66
Solyc05g045830.1.1 (Solyc05g045830.1)
- - -1.03 - - - -2.25 - 1.21 - - - - - - - - - - 1.72 2.46 1.32 1.49 0.53 0.72 - 0.68 0.59 0.25 - 1.39 2.67 - -0.95
Solyc05g045900.1.1 (Solyc05g045900.1)
- - - - -2.79 0.02 0.98 - 0.3 - - -3.09 -3.06 -2.95 - - - - - 1.32 0.73 -0.29 0.96 0.4 0.43 - 0.86 -1.14 -0.65 0.87 0.15 0.7 -2.12 3.58
Solyc06g024240.1.1 (Solyc06g024240.1)
- 0.16 1.52 0.98 -4.21 -2.86 2.78 -4.8 2.11 - -1.52 -2.13 -4.78 -2.66 1.26 0.8 1.87 -3.5 -3.15 1.07 -1.11 -2.95 -1.83 -2.21 -1.76 -3.23 -0.76 -2.36 -1.2 -4.05 -1.93 0.49 -1.45 -0.05
Solyc06g024370.1.1 (Solyc06g024370.1)
- - 0.81 -0.2 - -3.95 1.65 - -0.1 - - - - -2.35 1.36 - 1.59 - - 2.31 -0.26 - -0.52 -1.43 -0.25 -1.82 -0.45 0.75 0.19 -1.52 - 1.33 2.54 0.33
Solyc06g042990.1.1 (Solyc06g042990.1)
- - -0.16 -0.25 - -2.85 2.17 - 1.38 - - - - - - - - - - 1.14 1.57 0.16 1.83 1.16 -0.86 - 1.34 0.53 0.12 -0.57 -0.47 1.92 - 1.1
Solyc07g039290.1.1 (Solyc07g039290.1)
-7.21 -0.52 0.5 0.65 -10.63 -5.53 1.5 -8.71 1.28 -7.64 -6.34 -8.04 -8.87 -7.76 -2.87 -3.64 -2.74 -8.65 -7.44 0.8 -1.81 -0.0 -0.07 0.54 0.62 -7.86 0.36 0.76 1.56 -0.61 0.71 3.1 -2.35 -0.54
Solyc07g039295.1.1 (Solyc07g039295.1)
- -0.52 -0.12 0.52 - -1.45 - - - - - - 0.45 - 1.48 1.07 0.16 - - 2.75 0.21 0.18 - -1.61 -0.81 - -0.98 -0.56 0.91 0.29 -0.65 2.63 -1.98 0.96
Solyc07g043415.1.1 (Solyc07g043415.1)
- - - -0.48 0.85 -1.75 0.82 - 3.24 - - - - - -0.71 - - - - 0.8 - 1.0 0.28 0.23 0.72 - 0.52 0.31 -0.4 -0.23 0.17 1.99 - 1.14
Solyc07g055364.1.1 (Solyc07g055364.1)
2.2 - - - 0.42 0.67 - - - - - - - - - - - - - - - - - - 0.03 - 0.6 - -0.05 - - - - 4.52
Solyc07g055368.1.1 (Solyc07g055368.1)
3.82 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 4.31
Solyc08g028890.1.1 (Solyc08g028890.1)
- -0.2 - -0.18 - - 0.18 - -0.07 - - - - - - - - - - 0.84 1.32 0.06 1.81 1.14 1.18 - 2.28 0.86 0.69 - 2.08 1.5 -1.7 0.25
Solyc08g028920.2.1 (Solyc08g028920.2)
- - -1.21 - - -1.67 0.6 - 0.63 - - -2.84 - -1.62 -0.83 - - -2.53 - 2.74 0.57 0.63 1.34 0.35 0.36 - 1.43 1.08 1.11 - 0.19 2.1 -1.81 0.59
Solyc08g028977.1.1 (Solyc08g028977.1)
- - - -2.11 - -2.11 -2.43 - 1.86 - -3.22 - - - - - - - - 1.18 1.36 1.09 1.19 0.79 0.9 - 1.84 1.74 1.28 -0.44 0.98 1.88 -0.39 -1.67
Solyc08g029260.1.1 (Solyc08g029260.1)
- - - - - - -0.25 - 3.71 1.5 - - - - - - 0.69 - - 1.15 - 0.54 0.75 1.13 - - - - 1.58 - 2.35 - - -
Solyc09g031565.1.1 (Solyc09g031565.1)
- - - - - - - - - - - - - - - - - - - 5.09 - - - - - - - - - - - - - -
Solyc09g065525.1.1 (Solyc09g065525.1)
0.09 -2.37 -1.45 -1.13 0.33 -1.47 -0.41 -2.79 -4.74 1.44 -2.18 -2.52 -3.42 -3.16 0.64 -0.33 0.63 -5.6 -5.46 0.67 1.85 -0.49 0.9 0.5 0.12 -0.56 1.13 0.83 0.68 -0.84 0.22 0.88 0.56 -0.89
Solyc09g074765.1.1 (Solyc09g074765.1)
- - - - - -0.5 0.82 - 1.9 - - - - - - - -0.79 - - 1.16 3.14 1.26 - -1.07 0.09 - 1.05 0.69 -0.26 - 1.01 2.01 - 0.76
Solyc10g018945.1.1 (Solyc10g018945.1)
- 0.17 0.22 1.31 - -2.29 3.04 - -1.24 - -1.59 - -1.04 -2.15 -0.41 - - - - 1.05 0.7 - 0.54 -0.19 -1.64 - -1.66 0.35 -0.15 - 0.6 2.08 -1.15 1.83
Solyc10g039397.1.1 (Solyc10g039397.1)
-0.68 -2.91 -0.7 -1.86 -0.16 -0.81 -2.66 -2.53 -2.03 -0.21 1.09 -0.38 1.97 0.87 -1.34 0.8 -0.01 -2.51 - 1.14 1.46 -0.08 -1.44 0.04 -0.81 1.64 -0.47 0.18 -0.52 -0.19 -0.82 0.46 -4.38 0.13
Solyc10g045725.1.1 (Solyc10g045725.1)
- - - - - - -2.99 - 0.26 - - - - - - - - - - 1.92 3.33 -0.93 1.41 1.15 -0.71 - 1.11 0.45 1.19 -1.04 1.54 1.86 - -
Solyc10g061990.2.1 (Solyc10g061990.2)
- -2.55 -1.28 0.49 -3.87 -2.31 1.23 - 1.22 - - - - - -1.38 -2.25 - - - 0.82 2.06 1.12 0.2 0.29 0.6 - 0.83 0.32 0.84 0.09 0.73 2.54 -1.25 -0.49
Solyc10g062020.1.1 (Solyc10g062020.1)
- -2.7 -2.31 -1.49 - -3.37 1.69 - 0.8 - -2.59 - - - -1.93 - -2.29 - - -0.01 1.54 1.05 1.0 0.76 1.19 - 0.57 0.77 1.17 -0.37 0.88 2.68 -3.04 0.08
Solyc11g030903.1.1 (Solyc11g030903.1)
- 0.32 - -1.23 - -2.48 -0.07 - -1.14 - - - - - - - - - - 2.6 2.85 -1.89 1.17 0.47 1.37 - 0.67 1.76 0.56 -0.2 -2.08 1.24 -1.1 -0.8
Solyc11g042525.1.1 (Solyc11g042525.1)
- -1.54 - - 2.04 0.34 0.35 -1.05 1.59 -1.5 -0.19 -0.71 1.89 1.81 - -0.47 -1.0 - - 0.91 - 0.32 0.95 0.76 -0.92 - -0.51 -0.42 -1.13 -1.15 0.51 0.66 -1.83 -1.72
Solyc11g042527.1.1 (Solyc11g042527.1)
- - -2.14 -1.32 2.0 0.47 -1.52 - 1.12 0.78 1.44 0.79 2.15 1.8 -2.72 -2.89 -1.5 - - 0.04 -0.06 -1.24 0.09 -0.34 -1.09 -0.1 0.29 0.19 -0.82 -1.24 -1.43 0.09 - -1.74
Solyc11g056250.1.1 (Solyc11g056250.1)
-0.23 -2.32 -1.29 -1.23 -1.82 -2.27 -0.46 -3.44 0.89 -2.8 -1.08 -1.03 -2.23 -2.08 0.54 -0.36 0.36 -5.58 -5.57 1.52 1.6 -0.3 0.82 0.46 0.36 -2.44 1.32 0.41 0.81 -0.51 0.32 1.3 -0.74 0.95
Solyc11g063500.1.1 (Solyc11g063500.1)
0.11 -3.38 -2.19 -2.27 2.91 0.86 -2.3 -3.01 -3.97 1.34 2.01 1.15 0.77 0.85 1.07 0.28 1.06 -3.67 -4.42 -4.96 -3.64 -2.52 -2.17 -1.67 -1.97 -2.04 -1.52 -1.67 -1.44 -2.79 -1.61 -0.77 -0.3 -0.57
Solyc11g063510.1.1 (Solyc11g063510.1)
0.97 -2.15 -1.17 -1.15 -0.03 -1.61 -1.01 -2.46 -1.93 1.97 2.3 1.56 0.87 1.02 1.09 0.36 1.19 -4.88 -5.74 0.43 -2.74 -2.82 -1.54 -1.62 -2.13 -0.23 -1.31 -1.54 -1.4 -3.23 -2.15 -1.37 0.36 -0.43
Solyc11g063520.1.1 (Solyc11g063520.1)
1.24 -1.73 -0.53 -0.48 -1.1 -1.12 0.17 -2.67 -0.26 -0.42 0.27 0.27 -1.14 -0.37 1.25 0.27 1.12 -5.42 -4.89 1.27 1.98 -1.12 -0.61 -0.52 -0.69 -1.83 -0.34 -0.3 -0.18 -1.34 -0.58 0.26 0.89 -0.0
Solyc12g035790.1.1 (Solyc12g035790.1)
- - - - - - 0.54 - 1.71 0.7 - - - - - - - 0.18 -1.54 0.82 -1.08 0.05 0.16 1.05 0.69 - 2.75 1.08 0.9 - 1.44 1.84 -1.34 -0.52
Solyc12g035826.1.1 (Solyc12g035826.1)
- - - -1.78 -3.13 - 0.1 - 0.08 - - - - - - - - - - 1.32 -0.82 -0.04 0.78 0.27 0.95 - 2.33 0.64 1.39 -1.53 1.91 3.13 -0.91 -
Solyc12g035870.2.1 (Solyc12g035870.2)
- - - - -0.51 - 0.83 - - - - - - - - - - - - -0.56 2.73 - 0.93 -0.64 1.35 - 2.38 1.23 -0.3 - 2.02 2.42 0.43 -
Solyc12g038403.1.1 (Solyc12g038403.1)
1.23 - - - -2.18 -2.72 - - 0.76 - -0.57 0.05 1.39 0.51 - - 0.1 - - 2.88 - - -1.49 0.46 0.34 - 1.8 0.51 -1.83 -0.58 2.01 1.01 - -0.89
Solyc12g038407.1.1 (Solyc12g038407.1)
- - -0.65 0.01 -0.35 -2.74 - -0.66 0.58 - 0.17 1.72 -0.85 1.73 0.23 -0.4 -0.18 - - 2.37 1.05 - 0.5 0.15 0.03 - 0.89 -0.0 -0.39 -1.24 0.4 0.78 - -1.65
Solyc12g039003.1.1 (Solyc12g039003.1)
- - - - - -1.51 3.01 - - - - 0.33 - - - - - - - 3.24 2.3 - - -1.14 - - - - 0.02 2.65 - 1.18 - -
Solyc12g062570.2.1 (Solyc12g062570.2)
- -2.5 - - - -3.19 -0.82 - 2.06 - - - - - - - - - - 0.65 1.22 0.28 1.32 0.63 0.88 - 1.76 1.2 0.98 -0.47 1.95 1.89 -0.75 0.53
Solyc12g062580.1.1 (Solyc12g062580.1)
- - - - - -3.47 -0.65 - 1.09 - - - - - - - - - - -0.02 -1.56 -0.46 1.57 1.11 0.0 - 1.85 0.18 1.43 1.92 1.1 3.02 - 0.57
Solyc12g062640.1.1 (Solyc12g062640.1)
- - - - - 0.18 0.78 - 1.33 - - - - - - - -1.7 - - -0.83 -1.21 0.99 -0.06 1.18 0.99 - 2.0 0.7 0.84 1.29 1.67 1.92 0.26 1.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.