Heatmap: Cluster_220 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc00g180440.2.1 (Solyc00g180440.2)
-2.73 - - - -4.66 -1.57 0.09 - -0.12 - - -3.26 - -6.31 - - - - - 1.84 3.36 -0.48 0.05 -0.0 -0.19 - 1.0 0.02 -0.06 -0.66 -0.19 -0.34 -2.01 2.88
Solyc01g017083.1.1 (Solyc01g017083.1)
- - - - - -1.01 -2.11 - 1.38 - - -4.16 - - - - - -1.2 -2.66 -0.19 1.77 0.58 1.22 1.05 0.75 - 1.14 1.23 1.22 0.89 2.01 1.95 - 0.59
Solyc01g017087.1.1 (Solyc01g017087.1)
- -2.51 - - -2.61 -0.32 -3.41 - 0.88 - - - -4.49 - -1.23 - -2.59 -2.12 -3.37 1.48 1.92 0.29 1.34 1.33 1.12 - 0.67 1.11 1.02 0.52 1.3 1.28 -0.12 0.94
Solyc01g017110.1.1 (Solyc01g017110.1)
- - - - -1.44 -0.05 - - - 0.74 - - - - - - - 1.67 0.85 -0.11 2.0 0.96 0.33 -0.49 0.19 - 1.26 0.32 1.14 0.05 1.79 1.57 1.43 -
Solyc01g017170.1.1 (Solyc01g017170.1)
-2.96 - - - 0.81 1.83 -2.49 -0.02 -0.99 -2.3 -3.6 -3.67 -3.85 -4.77 -0.94 -1.72 -1.41 -6.52 -6.43 2.83 -0.14 0.56 -0.11 0.22 0.14 -1.04 0.61 0.66 0.42 0.47 0.51 0.74 1.47 -1.53
Solyc01g017183.1.1 (Solyc01g017183.1)
- -4.79 - -3.47 -1.92 2.24 -1.3 - -0.08 - -3.51 -5.93 -3.21 -4.46 - -5.04 - - - 1.91 3.21 -0.25 -0.05 -0.35 0.2 - 0.42 0.24 0.31 0.13 0.31 0.59 0.3 0.76
Solyc01g017333.1.1 (Solyc01g017333.1)
-2.14 - - - - -0.11 -2.64 -2.03 0.37 - - - - -3.06 -0.4 0.24 0.21 - - 1.7 1.85 0.44 0.35 -0.2 0.93 - -0.36 0.63 1.28 0.27 0.38 2.31 1.02 0.54
Solyc01g017337.1.1 (Solyc01g017337.1)
- - - - - - -1.07 - 1.93 - 0.07 - - - - - - -0.31 -0.19 -1.4 2.81 0.53 -0.22 -1.59 1.33 - 0.72 0.47 0.39 - 1.61 -0.06 0.89 2.09
Solyc01g017460.2.1 (Solyc01g017460.2)
- - -2.55 -2.9 -1.36 -0.61 -1.85 -2.9 0.98 - - - - - -2.77 -3.78 -5.11 - - 1.47 -0.94 1.02 0.79 0.9 0.64 - 1.69 0.98 1.24 0.91 1.53 1.67 1.08 0.95
Solyc01g017530.1.1 (Solyc01g017530.1)
-3.67 -3.59 -2.76 -3.11 -2.47 -0.54 -1.0 -4.11 0.67 - - - -6.21 -5.17 -4.5 -4.99 -4.99 - - 0.75 1.1 0.85 1.15 1.02 1.08 - 1.58 1.33 1.09 0.21 1.57 1.85 0.74 0.5
Solyc01g056470.1.1 (Solyc01g056470.1)
- -3.16 - -3.16 - 0.85 -0.69 - 3.02 - - - - - -3.42 -3.56 -2.52 - -5.23 1.04 -0.3 -0.04 0.18 0.3 -1.05 - -0.21 0.6 -0.11 0.03 0.81 -0.07 2.99 0.27
Solyc01g065610.1.1 (Solyc01g065610.1)
- - - - - -2.31 -2.65 - 1.61 0.24 -3.66 - - - -1.19 -2.82 - 1.11 0.65 1.43 1.59 0.85 -0.53 -0.09 0.11 - -0.09 0.55 1.01 0.26 1.1 1.73 0.8 1.0
Solyc01g065630.1.1 (Solyc01g065630.1)
-0.46 - - - - -3.74 -0.51 - 1.93 - - - - - - - - - - 0.94 2.47 -0.45 0.29 0.95 -0.54 - -0.17 1.42 0.9 -0.65 1.35 2.76 0.3 -
Solyc01g088030.3.1 (Solyc01g088030.3)
0.12 -1.27 -0.53 -0.87 -1.15 0.42 -1.99 0.81 0.31 0.36 -0.52 -0.5 -0.04 -0.42 0.99 1.11 0.97 0.67 -2.62 0.66 -0.46 -0.5 -0.73 -0.63 -0.71 1.47 -0.18 -0.17 -0.48 -0.35 -0.32 -0.38 -0.73 -0.22
Solyc02g011740.1.1 (Solyc02g011740.1)
- - - - - -6.33 -3.61 - 1.31 - - - -3.94 - -2.91 - -3.89 -0.99 -4.52 0.81 2.09 -0.12 -0.14 0.86 0.37 - 1.18 1.46 1.46 0.84 1.09 2.48 0.21 0.34
Solyc02g011755.1.1 (Solyc02g011755.1)
- - - -1.15 - -2.17 - - 1.7 - - - - - - -1.55 -2.26 - -1.53 0.31 1.21 0.71 0.75 1.25 0.65 - 0.11 1.27 0.78 0.67 1.87 2.47 -0.85 0.86
Solyc02g011800.1.1 (Solyc02g011800.1)
-5.32 - - -4.81 -2.65 -1.61 0.11 - -0.31 - - - -3.86 -4.95 -5.07 -5.21 -4.0 - -4.54 0.44 1.81 0.56 1.68 1.15 0.03 - 1.84 1.24 0.77 0.21 0.6 1.42 -0.25 2.23
Solyc02g011980.1.1 (Solyc02g011980.1)
-4.02 - - - -2.02 -0.06 -2.31 -5.1 -0.61 - -3.81 -4.35 -5.4 -4.54 -6.21 -6.22 - - - -0.86 1.57 1.36 1.17 1.17 1.26 - 2.0 1.5 0.85 1.47 1.77 1.52 -2.99 -0.23
Solyc02g011990.1.1 (Solyc02g011990.1)
-2.89 -6.24 -6.88 -4.83 -4.7 -1.48 -1.62 -5.23 0.47 - -8.47 -7.44 -8.3 -6.62 -2.93 -4.08 -3.85 - - 0.81 1.26 1.27 0.78 0.98 1.02 -6.85 1.11 1.58 1.09 1.37 1.95 1.46 -0.04 0.72
Solyc02g012000.1.1 (Solyc02g012000.1)
- - - - -3.8 -1.59 -2.98 - 0.26 - -4.39 - -6.07 -5.86 -5.03 -3.69 -5.92 - - -0.13 2.14 1.05 0.6 1.35 1.46 - 1.26 1.4 1.07 1.46 1.33 2.06 -0.25 -1.21
Solyc02g012010.2.1 (Solyc02g012010.2)
- - - - - 1.03 -0.51 -1.93 1.43 - - - - - - - -3.03 - - -0.66 1.24 1.13 0.92 0.91 1.59 -1.07 0.96 1.27 0.0 0.02 0.64 0.96 2.56 -
Solyc02g063080.1.1 (Solyc02g063080.1)
- - - -3.14 -1.49 -0.04 -2.36 -2.8 1.2 - - - -4.21 -4.28 - - -4.25 - - 0.57 1.7 0.92 1.85 1.39 1.08 -3.35 1.83 1.88 1.34 0.42 0.35 0.02 -3.46 0.27
Solyc02g091140.3.1 (Solyc02g091140.3)
1.01 -7.99 -6.57 - -0.66 1.83 -8.85 1.38 -2.58 -1.59 -8.64 -10.12 -10.08 - -7.67 - -9.65 -9.96 - -1.41 -3.34 0.23 0.34 0.4 0.19 -4.08 2.48 2.08 0.4 0.56 0.54 -1.17 0.71 1.63
Solyc03g013605.1.1 (Solyc03g013605.1)
- -3.39 - - - -0.51 -2.28 - 0.3 - - - - - -3.65 - -4.31 - - 0.4 2.54 1.11 0.47 0.72 0.61 - 1.79 0.81 0.53 0.76 0.45 0.99 -1.66 2.52
Solyc03g013610.1.1 (Solyc03g013610.1)
-2.3 -3.81 - -4.41 1.31 2.16 -1.24 - -3.81 -4.85 0.12 -0.31 -0.55 -0.7 -4.97 -5.14 -3.67 - - 0.18 1.52 1.13 -1.8 -0.46 0.59 - -1.02 0.17 0.77 1.25 1.07 1.68 -0.13 1.16
Solyc03g078005.1.1 (Solyc03g078005.1)
- - - - - -1.79 -1.1 - 2.95 - - - - - - -0.66 - - - -1.24 -0.09 - 1.1 1.29 0.7 - 0.47 0.39 1.0 -1.09 1.25 1.24 2.08 1.67
Solyc04g024570.1.1 (Solyc04g024570.1)
1.24 - - - -1.06 0.25 -1.4 -3.62 -1.06 - - -4.88 -2.73 -3.48 -2.98 -3.0 - - - 0.22 0.93 0.71 -1.11 0.53 0.76 - -0.19 0.15 1.0 0.89 1.65 1.56 0.02 2.86
Solyc04g026274.1.1 (Solyc04g026274.1)
-4.79 0.26 0.56 1.19 -3.18 -0.33 0.95 -2.75 0.61 -0.56 -2.13 -2.03 -0.02 -1.07 -2.24 -1.37 -2.67 -2.78 -4.79 0.43 0.6 0.71 0.77 0.8 0.6 -2.48 1.0 0.73 0.38 0.41 0.6 0.34 -2.48 1.05
Solyc04g028565.1.1 (Solyc04g028565.1)
- - -4.56 -1.84 - -1.92 -2.72 - 1.25 - - - - - -4.07 - - - - 0.85 1.69 0.47 1.13 0.83 0.86 -4.46 1.4 1.0 1.0 0.48 1.36 1.26 1.42 1.54
Solyc04g039790.2.1 (Solyc04g039790.2)
- - - - - -0.44 -3.51 - -0.71 - - - - - - - -4.69 - - -1.63 -0.33 1.08 0.85 0.86 1.03 - 1.33 1.56 1.56 1.93 1.51 1.25 2.55 -1.55
Solyc04g049673.1.1 (Solyc04g049673.1)
-1.39 -3.3 - - -2.34 -1.16 -0.96 -0.56 -1.07 -0.4 -0.27 0.57 1.3 -0.34 -2.49 -2.14 -1.12 - - 0.77 2.03 -0.73 0.75 0.74 0.23 -1.53 1.7 1.01 0.53 0.06 -1.02 -0.18 -3.69 1.84
Solyc05g007065.1.1 (Solyc05g007065.1)
-2.13 -3.19 - -5.18 -1.29 1.99 -4.07 -3.45 2.46 -0.16 -6.44 -3.82 -4.42 -6.25 -0.08 0.19 0.49 -1.19 -3.09 2.1 0.26 0.17 -1.38 -0.22 -0.1 0.39 -1.4 -0.26 0.87 -0.79 0.82 1.44 -4.1 -1.99
Solyc06g071285.1.1 (Solyc06g071285.1)
1.1 -0.96 -0.14 -0.04 -0.01 1.46 -3.47 0.74 0.97 1.35 1.29 0.91 0.0 -1.66 1.02 -0.53 0.7 - -7.17 -4.19 - -0.77 -0.26 -0.41 -0.62 -2.2 -1.19 -0.64 -0.62 -1.37 -0.44 -0.96 0.43 0.71
Solyc06g084050.3.1 (Solyc06g084050.3)
- - - - -3.34 -0.52 -3.8 -0.89 1.0 -3.07 -8.79 -5.89 -9.28 -9.26 -3.35 -3.14 -3.8 - - -3.03 -0.25 1.78 0.77 1.31 1.55 -8.01 0.95 1.23 1.07 1.86 1.68 1.26 1.61 -9.85
Solyc07g021220.2.1 (Solyc07g021220.2)
- - - - - -0.88 -0.44 - 1.19 - - - - - - - - - - 0.23 2.04 0.94 1.26 1.25 0.62 - 1.94 1.49 1.1 -0.04 0.97 1.9 -0.59 -0.3
Solyc07g021380.1.1 (Solyc07g021380.1)
- -3.73 - - -3.07 -0.87 -5.55 -3.71 4.01 - - - - - -3.09 - - - - -0.04 -1.64 -0.1 0.03 0.14 0.57 - -1.03 0.1 0.22 0.27 0.81 0.38 1.84 -0.92
Solyc07g026865.1.1 (Solyc07g026865.1)
-6.82 -8.57 - - -2.94 0.37 -0.21 -5.28 -0.2 -4.97 -5.71 -5.64 -4.75 -6.46 -9.82 - -10.66 - - -1.36 0.28 1.65 0.95 1.31 1.53 -4.93 1.54 1.89 1.55 1.7 1.49 1.35 -4.09 -1.21
Solyc07g032420.2.1 (Solyc07g032420.2)
- - - - - -3.33 0.52 - -2.43 - - - - -3.26 - - - - - 1.99 3.74 -0.36 0.99 0.0 -1.4 - 0.25 0.41 -0.46 - -3.05 -0.77 - 2.75
Solyc08g022150.2.1 (Solyc08g022150.2)
- - - -2.84 -2.33 -2.35 -0.94 - 0.56 - -2.71 - - - - - - - - 0.83 2.81 -0.56 0.48 0.4 -0.4 - 0.22 0.82 0.57 -2.12 0.18 -0.36 -0.56 3.48
Solyc08g028880.2.1 (Solyc08g028880.2)
-1.16 - - -1.83 -2.22 -0.45 -0.88 -1.01 2.09 - - - - - -1.76 -3.41 - - - 2.09 -0.29 -0.54 1.26 1.02 0.59 -1.51 1.76 0.85 0.51 -0.5 1.2 1.09 0.82 0.14
Solyc08g061900.1.1 (Solyc08g061900.1)
-7.56 -8.16 -7.66 -6.28 -6.31 -3.0 -3.3 - 0.94 - - -8.22 - -9.07 - - - - - -2.73 -2.91 1.29 1.39 1.7 1.27 - 2.17 1.73 1.01 1.54 1.92 0.74 0.89 -0.41
Solyc08g062290.3.1 (Solyc08g062290.3)
1.85 -5.9 - - -0.35 1.61 -5.05 0.19 -0.6 0.13 -0.86 -1.34 -1.07 -0.74 -0.13 -0.45 -0.72 -4.59 -2.96 -2.53 -1.12 1.5 -0.21 0.92 1.48 -0.61 -1.27 -0.07 0.31 0.86 0.29 1.4 0.14 -2.85
Solyc09g010890.1.1 (Solyc09g010890.1)
- - - - - - - - 3.14 - - - - - - - - - - 1.79 1.68 - - - - - - - - - - - - 4.21
Solyc09g031730.1.1 (Solyc09g031730.1)
- - - - 1.48 0.62 -4.03 - 2.46 -3.87 - - - - -1.16 -1.61 -2.12 - - 1.48 0.39 0.22 -1.05 0.3 0.26 -1.98 0.43 0.81 0.66 0.95 0.95 2.05 0.9 -5.41
Solyc09g061460.2.1 (Solyc09g061460.2)
-2.16 -7.96 -5.67 -6.37 1.18 1.9 -3.8 0.05 -1.77 -1.92 -1.28 -1.45 -1.78 -2.04 -0.62 -1.43 -1.4 -5.22 -4.39 3.22 -0.52 -0.04 -0.17 -0.1 -0.02 -2.25 0.45 0.32 0.11 0.04 -0.04 0.14 1.18 -1.98
Solyc10g044543.1.1 (Solyc10g044543.1)
-4.12 -5.58 -3.14 -5.1 -1.58 0.45 -1.93 0.26 0.06 -3.54 -6.67 - -5.59 -6.49 -1.03 -1.18 -1.55 - - 1.13 2.3 0.98 0.25 0.75 0.78 -3.55 0.87 0.92 0.41 0.9 0.78 0.72 1.96 -2.0
Solyc10g047400.1.1 (Solyc10g047400.1)
- - -5.16 -5.5 -4.57 0.22 -0.57 - -0.73 -5.61 -6.43 -5.84 - - -5.77 - -6.71 -6.47 - 0.15 1.7 0.49 1.63 1.15 0.73 - 1.98 1.48 0.85 0.12 1.22 1.2 0.45 1.6
Solyc11g021090.2.1 (Solyc11g021090.2)
-2.37 - - - -0.8 0.6 -4.1 0.72 -1.57 -1.61 - -4.96 -2.64 -3.92 1.09 -0.06 0.45 - -4.07 3.62 -0.4 -0.21 -1.3 -0.88 -0.23 -4.04 0.03 -0.03 -0.3 -0.6 -0.32 -0.53 1.86 -2.3
Solyc11g021100.1.1 (Solyc11g021100.1)
-2.3 - - - -0.79 0.86 -3.3 -1.31 -0.67 - - -3.64 -5.19 -5.27 -1.59 -1.54 -2.68 - -3.37 3.08 0.18 0.96 -0.03 0.79 0.73 -1.82 0.59 1.09 0.85 0.56 1.03 0.96 0.82 -1.52
Solyc11g021110.2.1 (Solyc11g021110.2)
-2.41 -5.43 - - 0.55 1.36 -3.27 -0.17 -0.75 -3.21 -2.23 -2.04 -3.2 -2.79 -1.23 -3.22 -1.42 -3.74 -7.5 3.41 -0.33 0.56 -0.26 0.02 0.09 -3.22 -0.12 0.56 0.52 0.72 -0.04 0.53 0.94 -0.67
Solyc11g022605.1.1 (Solyc11g022605.1)
-2.61 - - - - 1.11 0.05 - 0.33 - -3.4 - -3.73 - -2.74 - -3.13 - - 0.82 -0.63 0.17 1.59 1.22 1.44 - 1.42 1.25 0.55 -0.71 0.91 0.92 2.58 -1.04
Solyc11g022610.2.1 (Solyc11g022610.2)
-5.63 - - - -4.42 0.81 -5.97 - 0.68 - -5.96 - - - - - - - - 2.17 2.69 0.53 1.07 0.95 0.79 - 1.65 1.04 0.74 0.55 0.87 0.73 -3.79 -0.92
Solyc11g043190.1.1 (Solyc11g043190.1)
-1.59 - - -2.09 -1.5 -2.0 -1.67 - 0.3 - -1.19 -0.93 0.6 -2.19 - - -0.76 - - 1.62 2.4 0.38 1.76 0.99 0.11 - 1.36 -0.09 -0.11 -1.07 0.41 0.96 -3.6 1.86
Solyc11g051170.2.1 (Solyc11g051170.2)
-4.38 -7.5 -6.15 -6.46 -0.03 1.34 -2.18 -0.29 0.12 -4.46 -2.33 -2.48 -2.61 -2.71 -2.09 -2.96 -2.6 - - 2.28 2.21 0.46 0.01 0.51 0.64 -3.08 0.55 0.73 0.46 0.34 0.57 1.33 0.84 -0.91
Solyc12g033020.1.1 (Solyc12g033020.1)
-1.92 - - -4.93 0.49 1.65 -4.46 0.7 -0.1 -1.68 -1.11 -2.4 -2.52 -2.47 -0.15 -0.91 -0.76 - -4.75 3.03 -0.78 0.38 -0.16 0.07 -0.15 -3.02 0.14 0.31 0.09 0.52 0.74 0.82 0.68 -1.75
Solyc12g035740.1.1 (Solyc12g035740.1)
- - - - - -1.1 -3.09 - 2.39 - - - - - - - - - - 1.78 2.49 -0.8 0.69 0.64 0.78 - 1.36 0.55 0.79 1.02 0.16 0.13 0.97 0.8
Solyc12g062595.1.1 (Solyc12g062595.1)
-0.89 -0.9 - -0.75 -1.47 -0.37 - - 0.94 - - - - - - - - - - 0.66 0.13 0.8 -0.09 0.81 -0.02 - 1.07 1.19 1.18 -0.97 0.92 1.2 2.55 2.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.