Heatmap: Cluster_145 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g005010.3.1 (Solyc01g005010.3)
-0.49 -6.9 -1.29 -4.03 2.43 2.6 0.24 0.82 -0.86 -1.01 -1.63 -2.31 -4.01 -4.28 1.02 0.28 0.1 -4.68 -4.07 -3.92 -1.63 0.18 -0.52 -0.39 -0.33 -2.96 0.47 -0.02 -0.56 0.57 0.27 -0.18 -1.55 0.55
Solyc01g010525.1.1 (Solyc01g010525.1)
-6.86 -6.59 -2.49 -3.26 2.12 2.19 0.16 -0.15 -0.17 0.21 0.71 0.05 2.4 1.34 0.58 -0.42 -0.84 - - -6.48 -3.89 -0.67 0.27 -0.08 -0.72 -2.61 -0.9 -1.22 -1.42 -0.72 -0.2 -0.69 -2.67 -2.14
Solyc01g106090.3.1 (Solyc01g106090.3)
-2.83 -1.32 -3.12 -3.16 0.72 2.1 -0.99 1.89 -0.22 -1.03 -0.96 -0.79 -0.51 -0.89 -0.43 -1.04 -0.98 -2.06 -3.41 0.57 -1.06 0.18 0.08 0.11 0.03 0.58 0.6 0.38 0.07 0.34 0.32 -0.13 1.06 -2.24
Solyc02g066950.3.1 (Solyc02g066950.3)
-1.05 -1.14 -0.56 -0.21 2.02 1.78 0.29 0.81 1.06 -0.2 -0.4 -0.49 -2.41 -2.63 -0.03 -0.72 -0.31 - -11.31 -2.84 -0.87 0.49 0.3 0.47 0.31 -1.57 0.03 0.27 -0.05 0.41 0.24 0.06 -1.64 -0.9
Solyc02g070397.1.1 (Solyc02g070397.1)
-2.05 -1.15 -1.44 -2.92 2.02 2.06 -1.09 1.35 -0.28 -0.34 0.05 0.29 0.79 0.34 -1.06 -1.91 -1.54 -4.7 -5.35 0.54 0.39 -0.28 -0.52 -0.76 -0.51 0.27 -0.15 -0.11 -0.15 0.21 0.1 -0.1 -0.6 -2.62
Solyc02g078240.3.1 (Solyc02g078240.3)
-3.7 -5.88 -4.61 -5.13 2.58 2.53 -1.82 1.44 0.63 -1.07 -1.12 0.03 -3.25 -1.7 -0.02 -0.2 -1.12 - - -3.97 -3.04 0.49 0.4 0.42 0.22 -3.2 0.28 0.23 -0.01 0.36 0.22 -0.1 -1.25 -2.75
Solyc02g081150.1.1 (Solyc02g081150.1)
-0.73 -0.76 -0.12 0.24 2.19 1.67 1.89 0.1 0.66 -0.21 0.94 0.79 1.09 0.38 -0.62 -0.79 -0.9 - -9.46 -2.15 -0.55 -1.49 -1.67 -1.65 -1.85 -1.77 -2.04 -2.16 -2.15 -1.9 -1.33 -1.47 0.74 0.02
Solyc02g082200.3.1 (Solyc02g082200.3)
-1.4 -1.37 -1.77 -1.36 1.89 1.85 -0.89 0.74 -0.5 -0.77 -1.13 -1.09 -1.37 -1.35 -0.65 -0.86 -0.99 -6.09 -6.78 0.52 -0.73 0.41 -0.08 0.15 0.53 -0.18 0.21 0.28 0.24 0.5 0.34 0.68 1.18 -1.12
Solyc02g086350.3.1 (Solyc02g086350.3)
-3.18 -7.5 -2.74 -5.64 3.3 2.94 -1.23 -0.18 -0.16 -1.16 0.58 -0.17 -1.11 -2.07 -3.89 -4.15 -4.43 -8.95 -7.86 -3.15 -3.15 -0.04 0.69 0.62 0.01 -4.84 0.27 -0.46 -1.11 -0.85 -0.39 -2.76 -0.75 -1.14
Solyc02g090100.1.1 (Solyc02g090100.1)
-2.93 -4.13 -3.99 -4.52 2.51 2.51 -0.12 1.33 0.23 -0.97 -0.31 0.1 -0.35 -0.17 -1.28 -1.65 -2.29 - - -1.57 -0.79 0.02 0.03 0.29 0.32 -3.11 -0.08 0.28 0.0 0.08 -0.05 -0.42 0.05 -2.33
Solyc02g090670.3.1 (Solyc02g090670.3)
-1.18 -1.0 -1.66 -1.21 2.41 2.63 -0.15 1.34 -0.4 -0.46 -1.3 -1.29 -0.9 -1.25 -0.86 -1.15 -0.94 -5.06 -4.43 -0.69 -1.54 -0.08 -0.45 -0.23 -0.15 -0.01 -0.15 -0.12 -0.35 0.06 -0.11 -0.11 0.29 -1.35
Solyc02g091280.3.1 (Solyc02g091280.3)
-1.04 -0.88 -1.66 -1.88 1.56 1.83 -1.2 1.01 -0.18 -0.76 -0.17 -0.34 -0.04 -0.16 -0.73 -0.9 -0.77 -4.01 -3.89 0.16 -0.22 0.35 -0.03 0.15 0.32 -0.49 0.28 0.35 0.24 0.46 0.4 0.35 0.13 -0.98
Solyc02g093620.1.1 (Solyc02g093620.1)
-0.84 -3.36 -0.6 -0.77 0.88 1.85 -0.24 0.75 0.62 -0.41 -0.39 -0.58 0.16 -0.21 -0.63 -0.15 -0.72 -4.22 -5.51 -0.63 -0.46 0.14 0.25 0.28 0.2 -0.13 0.61 0.44 0.24 0.18 0.17 -0.1 0.29 -0.41
Solyc03g007600.3.1 (Solyc03g007600.3)
-1.88 -1.37 -2.48 -3.74 2.26 2.4 -1.61 1.22 -0.57 0.28 -0.29 -0.24 -0.15 -0.26 -0.27 -0.3 -0.16 -4.91 -5.43 -0.34 -0.84 0.02 -0.68 -0.47 -0.38 -0.26 0.03 -0.12 -0.2 0.07 0.23 0.33 -0.62 -2.06
Solyc03g082975.1.1 (Solyc03g082975.1)
-2.14 -1.89 -2.79 -3.21 1.52 2.01 -1.52 1.63 0.11 -0.6 -0.05 0.34 -0.15 -0.11 -1.06 -1.12 -1.03 -7.2 -8.32 0.33 -0.08 0.34 0.01 0.07 0.17 -0.57 0.38 0.18 0.02 0.42 0.36 0.07 0.04 -2.19
Solyc03g093180.1.1 (Solyc03g093180.1)
-7.1 - -6.16 - 3.16 3.72 -2.89 1.92 -0.24 -1.76 -3.23 -4.62 -3.11 -3.5 -0.08 0.84 -0.25 - - - -5.22 -3.79 -3.07 -3.81 -4.21 - -3.77 -4.18 -3.96 -4.39 -4.16 -6.35 1.11 -5.4
Solyc03g120240.3.1 (Solyc03g120240.3)
-1.67 -0.99 -0.92 -0.55 1.34 2.0 -0.48 0.88 0.38 -0.0 -0.22 -0.31 0.48 0.47 -0.42 -0.47 -0.59 -3.07 -1.49 -1.42 -0.44 0.16 0.3 0.27 0.05 -0.48 0.34 0.15 -0.14 0.08 0.21 -0.23 -2.3 -0.82
Solyc04g080380.3.1 (Solyc04g080380.3)
-1.18 -3.72 -2.63 -4.62 3.39 2.46 0.3 0.6 -0.27 -0.44 -0.28 -1.6 0.37 -0.6 -0.95 0.64 -0.57 -8.18 -9.58 -1.45 -0.85 -1.27 -1.22 -1.34 -2.07 0.28 -0.86 -1.11 -1.52 -1.5 -1.04 -1.91 -0.41 -1.82
Solyc06g083720.2.1 (Solyc06g083720.2)
- - - - -1.18 3.07 -5.23 3.92 1.87 0.38 - - -5.63 -4.43 -3.35 -4.77 -5.49 -3.52 -2.95 - - -5.44 - -4.62 - - -4.16 -1.55 -0.59 -1.2 -5.22 -4.12 1.59 -
Solyc07g006490.3.1 (Solyc07g006490.3)
-2.59 -1.8 -1.39 -2.01 1.26 2.24 -1.53 1.56 0.05 -0.46 0.46 0.91 0.88 0.86 -0.07 0.21 -0.02 -7.76 -7.97 -0.85 -0.48 -0.64 -0.54 -0.57 -0.6 -0.99 -0.24 -0.25 -0.35 -0.32 -0.43 -0.58 0.35 -1.59
Solyc07g009170.3.1 (Solyc07g009170.3)
-1.63 -0.68 -1.54 -1.83 1.0 1.47 -0.65 1.51 0.17 -0.18 -0.52 -1.01 -0.19 -0.24 1.19 1.12 0.98 -5.15 -3.99 -1.84 -1.66 0.29 -0.38 -0.12 0.05 -1.62 0.31 0.32 0.08 0.47 0.38 0.08 -1.69 -1.98
Solyc07g043160.2.1 (Solyc07g043160.2)
-3.25 -4.89 -3.36 -6.16 1.95 2.35 -0.98 0.66 0.33 -0.75 -1.3 -1.9 -1.02 -1.54 -0.81 -1.06 -1.58 - - 0.31 0.02 0.82 -0.43 0.24 0.59 -1.17 0.08 0.29 0.29 0.76 0.56 1.27 -0.22 -3.18
Solyc07g062730.1.1 (Solyc07g062730.1)
-1.8 -0.91 -4.14 -1.84 2.38 2.12 0.63 0.6 0.58 -0.19 0.79 0.73 1.53 1.71 -0.88 -2.01 -1.86 - - -3.25 -0.72 -1.17 -1.34 -1.25 -1.91 -2.98 0.23 -0.18 -0.9 -1.01 -0.49 -2.11 -0.83 -1.76
Solyc07g065900.3.1 (Solyc07g065900.3)
-1.53 -0.37 -0.49 0.03 1.25 3.94 -1.84 1.82 -0.23 -1.29 -2.38 -1.58 -2.92 -2.97 -1.66 -1.65 -1.48 -11.04 -9.06 -2.53 -2.19 -1.19 -1.0 -0.86 -1.06 -2.49 -1.44 -1.28 -1.34 -1.44 -1.39 -1.43 0.12 -0.55
Solyc08g007040.3.1 (Solyc08g007040.3)
-6.93 - -12.44 - 2.61 3.88 -6.12 2.3 0.19 -1.61 -5.34 -7.37 -8.75 -10.18 -1.54 -1.9 -1.99 -12.76 - -8.6 -9.85 -1.04 -1.77 -1.6 -1.58 - -0.88 -1.21 -2.1 -0.8 -1.06 -2.05 0.94 -4.97
Solyc08g008485.1.1 (Solyc08g008485.1)
-6.28 - 0.35 -1.39 4.14 3.05 1.63 1.27 -4.61 - -4.41 - -6.04 - - -3.47 -6.91 - - -5.02 - -3.01 -4.39 -4.6 - - - -7.87 -3.95 - -5.74 - -1.25 -6.55
Solyc08g022030.3.1 (Solyc08g022030.3)
-0.03 -1.19 0.14 -0.7 1.91 1.97 -0.48 0.48 -0.27 -0.58 0.15 0.34 0.66 0.57 0.09 0.38 -0.05 -6.33 -6.13 -0.58 -0.38 -0.78 -0.43 -0.59 -0.92 -0.63 -0.26 -0.46 -0.57 -0.7 -0.6 -0.91 -1.31 0.8
Solyc08g079000.3.1 (Solyc08g079000.3)
-0.56 0.57 -0.53 -2.16 1.62 2.65 2.29 1.7 0.29 -1.74 -1.56 -1.29 -0.64 1.11 -2.51 -2.07 -2.97 - - -8.08 -2.76 -1.44 -1.15 -1.52 -1.7 - 0.03 -1.02 -1.39 -0.76 -0.62 -1.61 0.62 0.3
Solyc08g079010.1.1 (Solyc08g079010.1)
-1.91 0.19 -0.48 -1.91 1.19 2.54 3.14 1.31 -0.05 -1.81 -0.8 -1.3 -0.48 1.35 -2.9 -2.86 -3.23 -7.35 - -6.28 -2.07 -1.67 -1.46 -1.85 -2.05 -5.33 -0.07 -1.14 -1.69 -1.21 -0.96 -2.27 -0.3 0.23
Solyc08g079180.3.1 (Solyc08g079180.3)
-2.42 -2.88 -3.22 -3.98 2.7 3.01 -0.23 1.81 -0.17 -1.42 -1.48 -1.39 -1.2 -1.5 -1.77 -1.08 -1.97 -5.54 -3.53 -1.29 -1.6 -0.4 0.3 0.12 -0.36 -1.49 0.15 -0.23 -0.62 -0.75 -0.5 -1.37 0.24 -1.98
Solyc08g082570.3.1 (Solyc08g082570.3)
-2.94 -4.14 -4.58 -6.55 2.78 2.33 0.04 1.81 -0.62 -0.51 -0.96 -1.48 -1.01 -1.52 -0.72 -1.08 -1.25 - - -1.9 -1.29 -0.04 -0.76 -0.47 -0.26 -2.39 -0.37 -0.29 -0.24 0.03 -0.15 0.02 1.62 -1.71
Solyc09g015360.3.1 (Solyc09g015360.3)
-1.87 -1.64 -1.64 -1.46 1.44 1.7 -1.47 0.98 -0.12 -0.49 -0.12 0.1 -0.03 -0.19 -0.11 -0.11 -0.37 -7.86 -8.36 0.08 -0.03 0.28 0.03 0.15 0.24 0.2 0.44 0.42 0.18 0.48 0.36 0.36 -1.08 -1.6
Solyc09g064490.2.1 (Solyc09g064490.2)
-3.25 - - - 0.49 3.41 -3.16 3.63 1.23 -0.01 - -3.1 - -3.78 -3.5 -1.69 -3.85 - - -3.98 - - - -4.11 -4.39 - -5.13 -2.18 -0.64 -2.56 - -2.15 1.95 -3.58
Solyc09g082630.3.1 (Solyc09g082630.3)
-1.72 -5.78 -3.79 -5.77 2.82 2.02 -1.47 0.39 0.44 0.79 -2.12 -1.4 0.1 -0.03 -0.45 0.26 -0.31 -9.92 -9.45 0.19 0.07 -0.54 -0.29 -0.28 -0.24 0.16 -0.45 -0.46 -0.5 -0.59 -0.55 -0.41 -0.13 -0.64
Solyc10g006330.3.1 (Solyc10g006330.3)
-1.93 -5.6 -8.65 -6.04 3.32 2.6 -0.91 0.42 -0.28 -1.22 -1.25 -1.0 -3.23 -3.94 -1.22 -0.05 -1.14 - -12.34 -1.05 -0.45 0.01 0.33 0.5 0.43 -3.27 -0.12 -0.06 -0.15 -0.58 -0.55 -0.51 -1.65 -3.5
Solyc10g009230.1.1 (Solyc10g009230.1)
-1.68 -3.16 -4.69 -4.73 2.62 2.23 -1.35 -0.19 0.37 -0.18 0.2 -0.45 1.15 0.97 -0.54 0.35 -0.19 -9.36 -8.57 0.79 0.42 -1.02 -0.98 -1.03 -1.02 0.47 -0.95 -0.98 -0.96 -0.98 -1.05 -0.81 -1.61 -1.19
Solyc10g037890.2.1 (Solyc10g037890.2)
-1.63 -1.49 -0.8 -1.96 0.6 1.34 -0.23 0.98 0.44 0.31 -0.36 -0.44 0.28 0.09 0.5 0.44 0.19 -2.72 -2.14 -0.54 -0.21 0.28 0.01 0.34 0.37 -0.35 0.19 0.23 0.01 0.31 0.25 0.09 -1.08 -0.94
Solyc10g078260.2.1 (Solyc10g078260.2)
-7.73 - - - 2.71 3.56 - 1.99 0.39 -0.76 -6.56 -6.86 - - 0.23 0.1 -0.45 -7.72 -8.73 -2.64 -2.88 -0.31 -2.19 -1.46 -0.88 -3.62 -1.33 -1.1 -0.93 -0.3 -0.49 0.05 -1.1 -4.54
Solyc10g078265.1.1 (Solyc10g078265.1)
- - - - 2.64 3.57 -7.0 1.88 0.45 -0.54 -4.62 -5.08 -10.22 -8.55 0.38 0.05 -0.43 -9.08 -9.99 -2.85 -2.08 -0.52 -1.96 -1.31 -0.88 -3.9 -1.09 -0.91 -0.78 -0.41 -0.54 0.11 -0.96 -5.38
Solyc10g084040.2.1 (Solyc10g084040.2)
-3.33 -2.07 -3.65 -3.38 1.62 1.68 -1.25 1.3 -0.5 -0.72 -1.75 -1.35 -1.99 -1.69 -0.34 -0.96 -0.74 - - 0.32 -0.76 0.59 0.2 0.4 0.47 1.0 0.73 0.7 0.44 0.79 0.68 0.52 0.07 -2.38
Solyc11g005340.2.1 (Solyc11g005340.2)
-3.66 1.9 -0.25 0.97 2.14 3.21 -3.12 1.98 -0.35 -1.3 -3.01 -3.62 -4.52 -4.56 0.86 0.67 0.07 -9.95 - - - -1.61 -1.45 -1.95 -2.46 -7.68 -0.67 -1.43 -1.65 -1.36 -1.45 -2.42 -2.7 -2.78
Solyc11g012690.2.1 (Solyc11g012690.2)
-2.99 - -8.01 -8.34 2.05 3.57 -8.49 2.83 0.43 -1.21 -9.6 -6.68 -5.85 -3.58 -3.42 -4.85 -5.28 - -8.32 -2.06 0.12 -1.5 -2.26 -2.29 -2.01 -1.03 -0.13 0.34 0.7 -1.26 -1.86 -0.88 -0.62 -2.74
Solyc11g031960.2.1 (Solyc11g031960.2)
- - - - 1.24 3.52 - 3.5 0.97 0.54 - - - - -6.68 - - - - - - - - - - - - -6.3 -4.35 - - -7.49 2.41 -
Solyc11g066410.2.1 (Solyc11g066410.2)
-4.2 -1.98 -2.28 -2.98 2.0 3.33 -1.82 2.32 -0.67 -1.41 -1.1 -0.3 -2.48 -1.51 -1.86 -2.45 -2.38 -12.39 -11.62 -2.02 -1.84 -0.26 -0.26 -0.37 -0.54 -2.79 0.33 -0.07 -0.59 -0.07 -0.09 -0.78 0.36 -2.89
Solyc11g069570.2.1 (Solyc11g069570.2)
-1.74 -8.93 -7.01 - 2.83 3.06 -0.97 0.94 -0.55 -0.14 -0.01 -0.35 -7.58 -6.12 -2.86 -2.11 -2.63 -10.42 - -2.48 -1.24 0.12 -0.42 -0.56 -0.3 -5.28 -1.72 -1.36 -1.06 0.03 0.0 1.26 0.69 -0.45
Solyc12g008830.2.1 (Solyc12g008830.2)
-3.76 - - - 2.87 3.93 - 2.82 0.26 -1.09 -1.5 -3.01 -3.62 -8.58 - - - - - -7.44 - -4.15 -2.07 -4.29 -4.6 -4.88 -7.35 -6.81 -4.97 -4.76 -5.3 -4.8 0.57 -7.04
Solyc12g014220.2.1 (Solyc12g014220.2)
-3.3 -2.15 -2.73 -3.6 2.45 2.37 -0.09 1.27 0.24 -0.25 0.25 0.44 0.23 -0.03 -0.3 -0.22 -0.61 -6.41 -7.96 -0.65 -0.09 -0.22 -0.39 -0.45 -0.59 -1.35 0.1 -0.39 -0.6 -0.25 -0.1 -0.65 -1.69 -2.42
Solyc12g062800.1.1 (Solyc12g062800.1)
- - - - 1.25 4.01 -3.66 2.22 0.82 2.11 -2.29 -4.93 - - -3.32 - -4.21 - - - -4.84 -0.93 -1.14 -0.97 -0.81 - -2.24 -2.05 -2.49 -1.96 -2.18 -3.36 0.01 -5.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.