Heatmap: Cluster_105 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
-3.06 -5.23 -1.92 - -3.12 -2.96 -2.2 -1.75 -3.21 -1.3 - -5.72 -3.53 -5.75 -1.47 -5.0 -2.48 -0.6 -5.2 -3.27 -2.56 -3.06 - 5.12 1.63 -5.28 -8.31 -1.16 -2.16 -0.94 -1.23 -3.65 -1.33 -0.29 -3.78 -1.18 -0.66 -1.71 -2.27 -2.3 - - -3.6 -1.29 -2.16 -1.33 -0.95 -3.14
- - - - -0.78 - - - -2.24 - - - - - -6.61 - -0.95 - - - - - - 5.41 1.8 -0.9 - - - -5.86 - - - - - - - - - - - - - - - - - -
- 2.55 1.3 -2.92 -3.75 - - - - - - - - - -7.07 - -0.73 2.81 - - - -1.63 - 4.82 1.61 -2.75 - - - - - - - - - - - - - - - - - - - - - -
-1.47 -2.29 -0.7 0.45 -2.28 0.12 0.52 0.12 -0.78 -5.38 -5.82 -5.26 -4.26 -4.58 -5.22 -0.74 -1.71 2.88 -1.45 -2.15 -5.33 -3.32 -1.87 4.65 2.14 0.37 -1.59 -2.77 -5.99 -5.72 -5.69 -6.88 -9.72 -8.08 - -5.81 - -5.84 - -6.62 -5.19 -5.21 -7.86 -2.71 - -5.73 -5.28 -7.0
- - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - -
-4.6 0.04 1.36 1.57 1.18 2.34 2.31 2.23 -0.68 -3.4 -4.16 -4.58 -4.75 -5.66 -4.24 -1.5 -0.88 -0.6 -0.79 -0.08 -0.33 -0.76 -1.95 3.76 1.26 -3.95 -2.52 -3.39 -4.02 -3.1 -2.91 -2.72 -3.47 -2.97 -5.79 -4.73 -3.39 -1.85 -4.01 -3.03 -3.18 -3.18 -3.29 -2.68 -3.83 -1.7 -2.68 -2.97
- - - - - - - - - - - - - - - - - - - - - - - 5.27 3.24 - - - - - - - - - - - - - - - - - - - - - - -
- 0.08 0.87 -4.06 1.03 1.37 2.0 2.13 -0.93 -0.53 - - -1.55 -4.79 -0.44 -3.13 0.45 1.42 0.51 -1.76 -2.06 -1.71 -4.11 4.02 2.23 -5.45 -6.93 -4.53 -5.71 -4.5 -1.82 -6.83 -7.54 - - - - -1.51 - -2.43 - - -1.74 -1.97 -4.89 -1.3 -1.63 -5.83
- - 0.06 -0.81 -3.77 -1.85 -3.05 2.6 1.85 -5.1 - - - - - 3.03 -0.18 1.51 - -4.01 - - - 4.41 1.14 -1.01 -4.54 - - -6.58 - - - - - - - - - - -3.77 - -2.53 - - - - -5.87
- - 0.41 - - - - - 1.95 - - - - - -4.0 - 2.35 - - - - - - 5.14 1.29 - - - - - - - - - - - - - - - - - - - - - - -
- - -3.26 -0.77 -0.27 -0.47 -0.13 -0.51 - -2.3 - -5.15 -4.08 -7.15 -3.45 - -2.66 0.27 -3.32 -5.15 -6.26 -3.65 -3.96 4.86 2.52 -3.62 -6.26 0.04 -0.55 -1.33 -1.44 -1.22 -1.65 -0.85 -1.77 -0.7 -0.91 -1.95 -2.1 -4.73 - -5.69 -5.7 -1.38 -3.12 -2.15 -1.31 -1.88
- -3.11 -3.13 -7.24 -8.18 -3.7 -5.87 -2.82 -2.35 - -6.04 - - - - -6.37 -2.41 -2.46 -3.25 -4.75 -6.65 -4.55 - 5.48 1.03 -3.23 - - -6.31 -10.32 - - - - -7.3 - - - - - - - -6.66 - - - - -
- - - 1.63 - - - - - - - - - - - - - 2.55 - - - - - 5.29 - - - - - - - - - - - - - - - - - - - - - - - -
- -6.37 -0.52 -3.9 -4.63 -3.17 -4.34 -2.09 - -4.14 - - - - -6.66 -3.52 -1.65 0.9 -2.98 -4.79 - -4.84 - 5.35 1.62 -4.22 -5.25 -6.01 -5.25 -3.69 -6.97 -6.58 -7.1 - - -5.98 - -5.46 - -6.65 - - - -5.25 - -4.64 - -5.62
- 1.74 -0.41 -0.78 - -3.5 - -2.06 -1.78 - - - - - -6.71 1.55 0.09 2.09 - - - - -3.44 4.66 2.88 0.52 -3.75 - -3.71 -6.81 -5.49 - - -4.71 -4.66 - - - - - - - - -4.76 - - - -
- 0.71 - - - - - - -0.04 - - - -0.45 0.25 -4.52 - -2.62 2.52 - - - - - 5.12 1.3 -2.72 - - - - - - -3.65 - - - -2.46 - - - - - - - - - - -
- 2.08 -3.04 -2.85 -1.12 - - - - - - - - - - - -0.98 -4.43 - - - - - 5.28 -1.21 -1.71 - 0.99 - -2.29 -1.32 - - -4.9 - -4.28 -4.58 - - - - - -4.35 - - - -2.43 -
- - -1.08 - - -1.32 - 0.65 - 1.34 - - 0.57 - -2.77 - 1.64 - - - - - - 5.1 - -2.06 - - - -3.21 -2.49 - - - - - - -0.88 - - - - 0.35 -1.45 - -0.31 -1.88 -3.46
- - - - - - - - - - - - - - - - - - - - - - - 5.38 - - - - - - - - - - - - - - - - - - - - - - 2.65 -
- 0.46 -0.37 -0.74 -5.03 -1.7 -0.62 - - - -2.42 -4.2 - - -5.03 - -0.67 2.07 1.95 -3.48 - - - 4.7 2.8 -0.58 -2.08 - -0.82 -4.83 - - - - -2.97 - - - - - - - - - - - - -0.64
-3.2 -1.35 -0.88 -3.62 -4.58 -4.76 -6.3 -2.12 -1.38 -5.78 -5.38 -3.63 -5.93 -6.3 -6.53 -2.2 -1.62 2.02 -5.26 -3.65 - -7.39 -5.97 5.19 2.13 -2.1 -5.83 -7.24 -6.22 -7.69 - -6.61 -8.4 -7.56 -7.22 -7.53 -7.47 -6.32 - - -5.43 - -7.09 -7.8 -6.3 -6.54 -7.32 -6.7
- -1.49 -2.42 -4.72 0.23 0.66 0.97 0.48 -0.39 0.85 0.02 0.3 1.18 0.79 -0.05 - -2.6 -4.56 -1.58 -4.59 -4.81 -1.32 - 4.24 1.68 -0.52 1.05 -1.54 -4.47 -0.74 -2.75 -1.24 -3.14 -5.2 - -2.73 -4.44 -1.04 -3.48 -1.19 -2.49 -1.83 -1.51 -2.11 -1.83 -0.87 -1.42 -1.02
- - -0.87 -1.78 -0.93 - - - -4.39 - - - - - - -0.25 -0.35 0.22 - - - - - 5.19 2.82 -2.19 - - - -4.54 - - - - - - - - - - - - - - - - - -
- 0.85 0.36 -0.71 -0.57 2.41 -0.63 0.88 - -1.44 - - -1.87 -0.67 -2.93 0.16 -0.37 0.19 - -1.41 - - - 4.48 0.65 -0.4 0.45 - - -4.77 -1.02 - - - - -2.57 - -1.56 -0.2 - -0.5 -0.25 -0.79 -1.32 -2.46 -2.58 - -2.39
- 1.09 1.26 -0.19 - - 0.55 1.7 -2.89 -3.25 -2.13 -1.76 -1.99 - -2.97 - -0.76 1.64 -2.53 -0.91 -2.4 -2.46 0.25 4.74 1.27 -1.37 -2.48 -3.56 - -3.78 -4.27 - -3.69 - - - - -2.41 - -2.55 - - -2.52 -3.17 - -2.81 - -
1.87 -2.25 -4.63 -6.26 -3.28 -3.35 -4.85 -1.65 - - - - - -5.82 -8.98 - -4.31 -0.24 - -4.96 - -5.59 -4.56 5.19 2.51 -2.14 - - - -8.27 -6.12 -6.13 - - - - - -5.01 - -6.2 - - - - - -5.12 -5.91 -
- 1.55 - - - - - - 0.17 - - - - - - - -0.2 -1.3 - - - - - 5.36 - 0.71 - - - - - - - - - - - - - - - - - - - - - -
- 0.3 - - -1.11 - - - - - - - - - -4.12 - - 0.3 - - - 1.02 - 5.3 -0.5 1.5 - - - - - - - - - - - - - - - - - - - - - -
-2.17 -2.13 0.6 -1.37 0.12 0.8 0.69 1.16 0.18 -0.16 -4.85 -6.06 -1.34 -3.02 -0.95 -0.77 -0.21 1.19 0.37 -0.3 -1.33 -0.58 -1.54 4.45 1.93 -2.41 -3.18 -3.72 -6.59 -3.58 -3.8 -4.99 -5.02 -6.94 -6.29 -7.26 -4.73 -0.41 - -2.35 -5.41 -5.5 -2.23 -2.73 -5.65 -0.47 -3.79 -3.87
-2.43 0.28 0.4 2.39 0.9 1.31 0.57 1.31 0.54 -2.04 -6.79 -4.77 -1.34 -1.13 -2.02 - -1.02 1.35 -2.54 -3.44 -1.43 -1.84 -0.22 4.07 2.05 -1.6 -2.21 -4.86 -3.24 -3.59 -4.29 -4.56 -3.3 -2.94 -6.01 -4.94 -2.06 -2.49 -3.63 -2.57 -2.85 -2.82 -3.36 -2.08 -3.17 -1.88 -3.91 -1.58
- - -1.43 -2.58 -1.07 -0.44 - - - - - - - - - - -2.32 0.91 - - -1.08 0.11 - 5.13 2.87 -2.41 - - - - - - - - - - - - - - - - - - - - - -
-3.09 1.1 -1.31 -2.14 -1.73 -4.17 -2.35 -2.35 0.75 -0.05 0.9 -0.39 0.33 -0.12 -1.4 0.81 -0.49 -1.03 -0.89 -0.32 -2.75 -1.81 - 4.19 -0.59 -0.04 -6.2 -1.22 0.36 -1.24 -0.04 -0.88 -1.17 -0.74 0.12 -1.42 -0.23 -0.78 -3.26 -0.21 -0.9 -0.49 -0.5 -1.42 -1.99 -1.6 -2.58 -2.08
- - 0.17 - -3.42 -2.97 0.64 -2.49 - -2.85 -3.95 - -2.82 -1.11 -3.71 - -0.3 1.17 - - - - - 5.17 1.48 0.69 -3.78 - - -5.27 -4.37 - -4.84 - - - -3.91 -3.41 -3.01 - - - -3.53 - -3.85 - - -
- 1.99 - - - 1.23 - - -0.86 - 0.3 - - - -3.17 - 0.25 1.25 - - - - - 4.85 2.01 0.46 - -0.21 - - - - -1.44 - - - - - - - -0.25 - - - - - - -
- - -2.9 - - - - - - - - - - - - - -0.77 1.83 - - - -0.29 - 5.29 1.85 - - - - - - - - - - - - -2.24 - - - - - - - - - -
-5.6 -0.2 0.16 -4.15 -3.03 -4.61 -5.89 -5.59 -2.14 -8.9 -8.57 -6.5 - - -7.99 -9.52 -1.46 2.15 -0.31 -1.22 -2.76 -2.21 -2.5 5.21 0.92 -6.8 - - -7.05 -9.96 - -10.26 - - -9.94 - - - - - - - - -10.52 - - -9.04 -10.5
- - 1.63 0.08 - - - - 2.23 -4.56 - - - - - 2.64 1.38 2.58 1.23 -2.93 - - - 4.18 1.56 -0.52 - - - -6.67 - - - - - - - - - - - - - - - - - -
- - -1.47 -0.9 - - 1.29 -2.05 1.3 - - - - - - 1.53 -2.5 -1.28 1.73 -1.46 - -2.38 - 4.95 1.72 -2.5 - - - - - - - - - - - - - - - - - - - -3.03 - -
- - 0.8 - - - -0.06 - - - - - - - - - - - - - - - - 5.18 3.19 - - - - - - - - - - - - - - - - - - - - - - -
-1.22 1.05 2.13 -0.15 -1.54 -1.4 -2.38 -1.96 -1.09 -1.16 -0.18 -0.36 -1.46 -1.89 -1.4 -2.36 -1.66 2.11 -1.79 -1.93 -1.86 0.33 -3.97 4.03 1.08 -0.78 -0.71 -1.76 -0.48 -1.83 -1.96 -0.96 -0.84 -0.45 -2.48 -1.01 -0.51 -0.49 -1.65 -1.64 -4.04 -3.2 -2.08 -1.57 -1.0 -0.15 -1.81 -1.71
- - -5.73 -2.84 -2.43 -2.84 - - - -5.26 - - - - -10.12 - -2.05 0.25 -2.56 -3.77 - - - 5.41 1.57 -2.61 -4.88 - - -6.75 - - - - - - - - - - - - - - - - - -
- 0.12 0.05 -3.5 -2.03 -2.56 -1.09 -1.52 -1.26 -8.13 -6.43 -8.15 - -8.54 -7.87 - -3.46 -0.08 -6.57 -5.01 -6.19 -4.27 -4.55 5.32 1.43 -3.44 - -4.53 -8.06 -7.48 -7.72 -8.85 -9.75 - - - -8.78 -8.83 - -8.31 - -7.47 -6.79 -9.11 -6.41 -8.34 - -6.79
-1.23 0.1 -1.75 -6.23 -3.98 -4.59 -3.34 -4.37 -3.95 -4.64 -4.2 -3.31 - -3.73 -4.85 -5.21 -3.3 1.32 -4.58 -4.62 - -4.79 - 5.28 1.55 -2.18 -4.1 - -5.34 -3.93 - - -6.24 - -3.78 -4.61 -5.29 - -5.02 -5.13 -3.67 -3.62 -4.47 -4.19 -5.92 -5.86 - -3.81
- - -0.38 - - -1.98 - - - - - - - - - - - 3.15 - - - - - 5.13 1.46 -2.72 -2.01 - - - - - - - - - - - - - - - - - - - - -
-3.9 1.93 1.79 -2.99 -0.33 -0.27 -0.24 0.01 -1.95 -3.76 -6.31 - -5.83 -7.34 -3.66 -1.97 0.85 2.31 1.01 0.44 0.08 0.44 0.12 4.27 1.6 -4.0 -7.2 -5.28 - -6.5 -6.52 -6.46 -7.54 -7.58 -8.14 -7.36 - -4.96 - -5.83 - -7.76 -4.83 -5.23 -7.17 -4.33 -5.29 -
-2.59 2.18 2.27 -2.96 -1.5 -1.45 -0.99 -1.39 -2.46 -3.97 -7.91 - -4.56 -6.21 -4.46 -4.82 -1.11 0.48 -0.57 -1.01 -0.33 -1.26 -0.22 4.75 0.45 -3.63 -5.06 -6.5 -6.29 -4.55 -4.86 -8.06 -5.88 -5.81 -7.75 -6.64 -7.35 -3.79 -7.33 -3.53 -1.18 0.68 -2.48 -3.71 -5.01 -4.12 -3.37 -3.34
-7.44 -0.42 -0.34 -4.28 -2.2 -2.36 -0.92 -1.59 - -6.59 - -5.89 - - -8.28 -4.85 -1.62 0.49 -1.29 -3.29 -2.41 -3.67 -6.02 5.29 1.75 -3.22 - - -7.98 - -8.57 - - - -7.78 - - - - - - - - - - - - -
0.8 0.08 1.59 -0.92 -2.26 -2.04 -2.06 -1.46 -1.23 -0.65 -2.01 -2.13 -0.04 -0.1 -0.6 -0.32 0.73 1.35 0.38 0.07 -0.51 0.06 -2.2 3.33 0.33 0.73 0.95 -1.11 -0.93 -0.76 -0.95 -1.39 -0.77 -0.02 -1.27 -0.77 -0.76 -0.33 -1.07 -0.4 -0.95 -0.69 -0.84 -0.83 -0.74 -0.16 -1.57 -0.88
- - 1.41 - -1.7 2.26 - - - - - - - - - - 1.31 0.4 - - - - - 5.11 -0.99 0.4 - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.