Heatmap: Cluster_127 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - -0.35 -5.06 - -1.17 -0.06 - - -5.69 - -4.79 - -4.04 -4.16 -1.91 0.99 -1.02 - - - - - -3.44 3.46 4.32 3.42 -2.6 -1.57 -8.03 -4.11 - -4.94 -4.86 -2.82 - - - - - - -2.76 - - - - -4.43 -2.89
- - 2.3 - - - - - - - - - - - - - 2.89 - - - - - - - - 5.16 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.53 - - - 0.74 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
3.82 - 3.24 - 2.74 - - - - - - - - - - - - - - - - - - - - 4.15 - - - - - - - - - - - - - - - - - - - - - -
- - -0.34 -2.81 0.01 0.07 -2.36 -1.44 -1.44 0.16 -2.65 -2.98 -1.03 -0.82 0.31 0.76 0.29 -3.64 - -2.51 0.49 0.53 - -2.28 2.26 3.77 2.9 -2.38 1.33 -1.5 -4.13 -3.83 -3.22 -1.2 -3.83 -2.25 - -1.06 - -3.14 -3.15 -0.52 0.23 -2.94 - -2.68 -3.46 0.31
0.88 - 2.16 - - - - - - - - - - - - - 1.36 1.81 - - - - - - - 5.14 - - - -2.09 - - - - - - - - - - - - - - - - - -
-4.49 - -3.24 -2.98 -3.7 -2.14 -3.7 -4.48 -3.14 -3.77 -5.28 -7.1 -1.19 -0.84 -2.57 -1.42 -1.97 -1.47 -1.16 -2.31 -3.56 -1.84 -4.63 -2.58 2.57 4.71 3.22 - -3.32 -2.0 -4.44 -4.67 -3.71 -1.82 -4.82 -4.74 -3.72 -4.46 -0.58 -2.69 - -4.34 -4.1 -3.83 -2.77 -4.38 -3.36 -3.61
- - - - 2.79 - - - - - - - - - - - - - - - - - - - - 5.35 - - - -2.34 - - - - - - - - - - - - - - - - -11.82 -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- 0.84 1.04 -1.57 1.43 0.62 0.39 -0.7 -1.79 -0.71 -0.23 -0.32 -2.51 -2.96 -3.6 -2.83 -1.03 0.89 0.55 -2.36 -0.85 1.03 -2.02 0.13 1.51 3.16 2.29 1.22 -1.51 -0.49 -2.8 -1.52 -1.15 -0.63 -3.87 -1.56 -1.29 -1.4 -2.51 -0.71 -3.52 -1.89 -1.21 -1.05 -1.71 -1.5 -1.18 -0.63
- - 2.47 - - - - - - - - - - - - - - - - - - - - - - 5.41 - - - - - - - - - - - - - - - - - - - - - -
- - 1.54 1.98 - - - - - - - - - - - - 2.6 2.14 - - - - - - - 4.94 - - - - - - - - - - - - - - - - - - - - - -
- - 3.1 - - - - - - - - - - - - - - 1.52 4.36 - - - - - - 4.01 - - - - - - - - - - - - - - - - - - - - - -
-3.87 -1.74 1.64 -4.26 1.27 0.13 0.03 -0.5 -3.52 -1.32 -2.75 -2.73 -2.08 -2.95 -1.34 0.02 0.28 -1.48 1.24 1.38 0.89 0.12 -0.66 -1.21 1.2 3.26 2.02 -0.77 -2.72 -0.99 -0.76 -0.99 -1.17 -1.02 -2.31 -1.4 -0.68 0.0 -1.52 -1.18 -2.04 -2.01 -0.93 -0.92 -1.86 -0.05 -0.86 -0.83
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- 0.8 -5.35 -5.92 -4.43 -2.27 -2.21 -5.6 -2.29 -3.83 -5.77 -5.92 -5.08 -4.39 -1.95 1.77 -4.66 -3.25 - -5.2 - -4.05 - - 1.56 4.94 2.88 - - -7.37 - -3.86 - -5.42 -4.47 - - -3.2 -5.09 -4.89 - - -5.77 - - -5.79 - -7.39
-2.78 -0.99 -2.46 -0.9 -2.96 -0.93 -0.55 -0.87 -0.95 -3.22 -0.38 -0.71 -2.38 -2.11 -3.0 -0.05 -1.38 0.63 -2.95 -3.89 -3.61 0.01 -3.9 0.1 3.18 4.13 3.02 -4.31 -1.63 -2.81 -3.97 -2.38 -3.71 -4.34 -2.52 -3.38 -3.93 -3.55 -3.69 -3.64 -3.05 -3.49 -5.58 -5.88 -3.03 -3.7 -6.66 -2.21
-0.48 -0.67 - -7.57 -2.48 -0.61 -1.16 -0.99 2.25 -0.76 1.5 1.82 0.15 1.99 0.18 -0.45 0.53 -2.7 -4.55 -2.08 -2.24 -3.58 -6.09 -2.3 -0.45 4.17 0.24 - -8.54 -2.91 - 1.6 -7.25 - - - - -3.42 - -3.06 -3.03 -4.29 -4.84 -8.41 -5.78 -3.36 -7.64 -2.56
- - - - 2.14 - - - - - - - - - - - - - - - - - - - - 5.45 - - - - - - - - - - - - - - - - - - - - - -
- 0.56 0.42 -2.71 -5.39 -2.86 - -1.16 - -5.96 -5.23 -3.69 - -4.77 -4.79 1.33 -0.54 -3.28 - -4.8 - -4.85 -3.82 -3.78 2.26 4.84 2.57 - -5.78 -3.74 -2.73 -5.39 -4.54 -3.94 - -3.71 -5.09 - - -4.85 -1.53 -3.1 -4.13 -5.64 - - -4.01 -2.6
0.97 0.51 -5.17 -2.01 -1.49 1.27 1.48 1.65 1.79 0.02 -0.44 -0.35 -0.59 -2.2 0.04 -0.01 0.51 0.1 -1.72 -1.24 -0.68 0.42 -2.09 -1.08 2.16 3.53 1.51 -6.2 -6.66 -4.17 -3.9 -2.42 -6.02 -5.87 -8.54 -3.61 -6.03 -1.15 -6.62 -2.8 -6.63 -6.12 -2.18 -3.31 -5.86 -1.18 -4.36 -4.64
- - -1.89 -1.69 -1.83 -4.61 - -3.41 - -6.2 -5.36 - -4.23 - -1.97 -2.73 -0.33 -3.57 - -3.07 -1.93 -5.24 - -3.99 0.71 4.23 2.32 -3.51 2.55 -0.48 -4.59 - -0.23 1.67 -1.5 - - - 1.45 -5.46 -1.97 0.93 0.48 -2.77 -1.72 - -3.48 0.89
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - - - 3.79 - - - - - - - - - - - - - - - - - - - - 5.09 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - 1.64 -0.54 - 2.61 - - - - - - - - 5.25 - - - - - - - - - - - - - - - - - - - - - -
0.6 - 0.92 - - - - - - - -0.47 1.36 - - -3.33 3.44 2.23 -0.78 - - - - - -0.15 -1.31 4.55 - - - -5.19 - - - - - - - - - - - - - - - - - -1.29
-2.46 -4.5 -7.07 - -2.59 -0.88 1.25 -0.04 -1.13 -4.17 -7.28 -6.36 -2.18 -0.62 -4.09 0.39 -1.62 -0.88 -6.08 -5.34 - -3.32 -8.62 -3.82 2.44 4.93 1.92 - - - -10.66 - -8.83 - - - -9.61 - -7.84 -6.96 -8.15 -5.76 -9.66 -7.41 -8.43 -7.24 -8.46 -10.22
- - - - - - - - - - - - - - - - - 3.16 - - - - - - - 5.29 - - - - - - - - - - - - - - - - - - - - - -
- - 4.06 - - - - - - - - - - - - - - - - - - - - - - 4.97 - - - - - - - - - - - - - - - - - - - - - -
-1.9 -1.0 -0.82 -1.74 -0.42 -0.32 0.04 -0.04 -0.55 -0.3 1.33 1.12 -0.17 -0.36 -0.04 -0.06 0.41 -0.93 -0.91 -1.08 -0.18 0.6 -2.8 -1.97 1.99 3.01 1.77 -0.88 -0.83 -0.5 -1.15 -0.78 -1.08 -0.99 0.04 -0.09 -1.13 -2.26 -1.52 -1.24 -0.11 0.21 -0.25 -1.47 -2.02 -2.46 -1.18 -0.77
-3.53 -1.47 -2.06 0.42 2.39 0.84 0.34 -0.21 -2.7 -1.68 -2.6 -3.45 -1.42 -2.89 -0.21 -1.35 0.8 -0.27 0.86 -1.55 -2.58 -1.01 -2.37 -0.41 0.79 4.41 2.26 - - -8.64 -8.83 -7.38 - - - - - -5.83 - -5.0 - - -6.85 -4.5 -7.14 -4.16 -7.16 -9.67
- - -1.98 -6.23 -3.05 -2.39 -1.71 -2.86 - -0.94 -8.26 -6.97 1.3 -0.56 -0.75 - -2.82 -0.26 -3.68 -0.76 -1.2 1.03 -3.84 -1.55 2.22 4.41 2.25 -4.67 -4.84 -3.41 -4.35 -4.39 -4.18 -3.63 -7.34 -6.41 -3.81 -2.6 -4.26 -0.96 1.25 0.95 -0.77 -0.59 -3.54 -2.64 -2.85 -1.68
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
0.99 -10.75 -8.32 -7.83 -3.17 -4.53 -3.8 -2.73 -4.28 -2.97 -7.59 -8.04 -4.66 -4.29 -4.92 0.33 -5.27 -4.98 -8.14 - -8.58 -4.9 - -7.08 2.5 4.4 1.94 0.01 0.25 -0.27 -0.77 -5.48 -0.95 0.32 0.41 -1.04 -1.71 -0.65 -0.23 -0.83 -2.83 -2.25 -2.1 -0.28 -0.86 -0.37 -0.37 -1.79
- - 3.16 -0.25 - - - - - - - - -1.32 - - - 0.29 -1.0 - 2.47 - 0.71 2.61 3.21 - 3.41 - -0.73 -1.06 -4.09 - - - - - - - - - -0.5 - - - - -0.91 - -0.81 -
-2.39 -3.09 -4.83 -4.45 -0.83 -1.02 -1.64 -1.48 -1.44 -0.08 -3.84 -3.71 0.38 1.81 0.13 -0.61 0.03 0.98 -0.75 0.45 0.94 1.4 -4.11 0.86 2.44 3.69 1.86 -3.3 -5.19 -2.68 -1.83 -2.87 -1.84 -2.58 -5.88 -3.33 -3.14 -1.91 -3.24 -1.21 -2.26 -1.76 -0.65 -2.02 -2.19 -2.02 -2.2 -2.15
-1.04 -2.6 -3.1 -4.15 -2.03 -0.95 -0.65 -0.37 -0.71 -0.7 -2.46 -2.57 -0.88 -1.73 -0.99 -1.31 -0.4 1.37 -1.84 -2.1 -1.32 -0.62 -4.96 0.12 2.71 3.6 2.29 -0.33 0.57 -1.44 -0.99 -1.67 -1.18 -1.89 -2.58 -1.29 -0.59 -0.41 -1.36 -1.83 -0.48 -0.18 -0.7 -1.27 -0.87 -0.08 -1.55 -0.31
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - 3.27 - 1.47 1.84 - - - - - - - - - - 3.4 1.87 - - - - - 3.36 - 2.03 - - - - - - - - - - - - - - - - - 1.79 - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- 0.59 0.38 -4.24 -0.48 0.1 0.51 1.37 0.96 -3.82 -5.08 - - -3.36 -4.71 - -0.82 1.33 - - -4.64 - - -1.49 2.09 4.66 1.75 - - -3.5 -6.09 - -4.63 - - - - -2.62 - -3.57 - - - - -1.73 -4.09 - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
-1.35 0.19 -1.45 -3.59 1.38 0.88 0.34 0.4 0.97 -0.93 -0.66 -0.17 -0.83 -1.56 -0.81 -1.42 -0.26 -0.93 -0.61 -0.84 -1.48 -0.95 -1.12 0.55 1.68 2.99 1.47 -1.53 0.05 -0.2 0.28 0.22 -1.03 -0.92 -1.01 -1.54 -0.54 -0.98 -1.53 -0.75 -1.01 -0.93 -0.33 -0.9 -1.57 -1.01 -0.27 0.26
- 0.76 2.12 - - - - - 2.56 - - - - - - - 1.84 - - - - - - 2.26 - 4.79 - - - -4.53 - - - - - - - - - - - - - - - - - -
-3.44 - - - -5.57 -3.89 -5.99 -5.14 -1.8 -3.8 -7.42 -6.26 -1.55 -2.2 -0.85 -4.73 1.68 0.63 2.51 1.87 -0.21 0.75 -4.01 2.01 1.46 4.25 1.34 -1.74 -6.5 -5.9 -6.67 - -2.47 -4.76 -4.37 -5.0 -1.47 -4.47 -7.61 -8.65 -8.05 -5.46 -7.09 - - -3.82 -7.07 -4.12
- - -4.26 -8.27 -6.69 -5.84 -6.35 -3.78 -6.41 -7.97 -9.09 - -8.32 -9.08 -7.36 -5.51 -5.64 -5.67 - -7.45 - -7.09 - -6.82 3.75 4.64 3.2 -5.63 -5.53 -7.11 -6.7 -6.69 -6.53 -7.46 -6.53 -5.07 -6.34 -7.93 -6.23 - - - - -6.75 -7.76 - -7.34 -7.09
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - 3.57 -0.26 - 2.31 - 3.35 - - - - - - - - 1.23 - - - - - - - - 4.16 - - - - - - - - - - - - - - - - - - - - - -
- - 2.66 1.81 - 3.16 - 2.61 - -0.4 - - - - - - 0.67 0.08 - - - - - - - 4.12 - - 0.25 -3.16 - - -0.03 - - - - - - - - - - - - - - -
- - 2.27 - - - - - - - - - - - - - 3.33 - - - - - - - - 4.76 2.58 - - - - - - - - - - - - - - - - - - - - -
-1.71 -1.59 0.08 -2.96 -0.91 0.11 0.26 -0.11 -1.65 0.04 -0.17 0.05 0.39 -0.65 0.11 -2.31 -0.35 0.47 -1.33 -0.07 -1.05 -0.49 -2.97 0.08 1.73 2.83 1.45 0.03 -0.66 -0.58 -0.11 0.48 -0.41 -0.56 -1.61 -0.49 0.35 0.38 -1.47 -0.64 -0.62 -0.65 -0.56 -0.65 -0.88 0.38 -0.4 -0.04
- - 0.42 - -1.18 -0.46 - - - -0.7 1.28 0.28 -0.19 -2.07 -2.35 - -0.62 0.01 - - - -2.09 - 0.88 2.72 4.41 1.77 - -2.27 -2.26 -1.94 -1.24 -1.71 -2.44 - - -0.81 -0.12 -1.54 - - - -1.79 - -2.46 -1.24 -2.02 -1.59
- 0.55 1.27 -1.05 -1.28 0.91 -0.05 -1.94 - -2.3 -2.31 -0.47 - -2.02 -2.75 - -2.2 -2.3 - - - -1.79 - 1.25 1.45 4.79 1.15 -0.28 - -2.37 -2.73 - -4.18 - - - - - -1.64 - - - - - - -1.05 -2.11 -0.74
- - 0.21 2.36 0.33 0.0 -0.56 -0.23 -1.14 -8.62 -6.74 - - - -5.98 -0.5 -3.25 0.41 -1.78 -1.78 1.46 1.23 - -1.89 1.38 4.57 1.52 - -4.21 -9.19 - - - - - -7.8 - - -6.85 - - - - -6.55 -6.85 - - -6.26
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - 0.34 2.08 1.96 - 2.18 - - - - 0.77 - - - - 0.93 0.94 - - - - - - - 4.84 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
- - 4.63 - - - - - - - - - - - - - - - - - - - - - - 4.54 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 3.94 - - - - - - - - - 5.03 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - 2.78 1.55 - - - - - -22.47 - 5.26 - - - - - - - - - - - - - - - - - - - - - -
- 0.09 -4.7 - - - - - - - -6.23 - - - -10.28 -1.92 -2.9 1.1 - - - -2.51 -6.25 -1.3 3.28 4.51 3.48 - - -8.66 - -7.46 - - - - - - - -6.77 -5.48 - -5.78 -6.04 - - - -7.11
- - 4.53 3.38 - - - - - - - - - - - - - - - - - - - - - 3.86 - - - - - - - - - - - - - - - - - - - - - -
- - 2.42 - -0.95 - - - - - - - - - - - 0.89 - - 2.48 - - - - - 4.29 - - - - - - 2.34 - - 1.85 2.69 - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.