Heatmap: Cluster_411 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g098790.2.1 (Solyc01g098790.2)
-1.85 -3.58 -2.07 -3.05 -2.64 -0.5 -0.3 -2.9 1.2 1.29 -0.52 0.44 1.88 0.86 -0.24 -1.18 -0.73 -6.6 -7.75 0.13 0.58 0.18 0.06 -0.03 -0.71 -0.39 1.01 0.95 0.78 0.91 0.6 -0.36 -6.14 -1.73
Solyc08g078140.3.1 (Solyc08g078140.3)
0.21 1.08 0.01 0.01 -0.23 -0.18 -0.2 -0.61 1.64 1.37 -1.14 -1.05 0.53 -0.08 -0.21 -0.57 -0.32 -3.43 -3.14 -1.26 1.26 -0.61 -0.6 -0.6 -0.39 1.09 -0.01 -0.32 -0.24 -0.37 -0.2 -0.52 -2.75 0.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.