Heatmap: Cluster_409 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc07g042900.3.1 (Solyc07g042900.3)
-0.52 -1.18 -1.17 -0.52 0.06 0.16 -0.09 -0.48 0.52 0.81 0.64 0.03 0.06 -0.36 0.5 0.57 0.45 -5.41 -5.36 0.04 0.37 0.2 0.36 0.21 0.19 0.59 0.01 -0.11 -0.15 0.0 0.12 0.24 -0.53 -0.64
Solyc07g042905.1.1 (Solyc07g042905.1)
-0.15 -0.68 -0.69 -0.2 -0.73 0.03 0.2 -0.2 0.43 0.39 0.44 -0.25 -0.34 -0.54 0.82 0.75 0.79 -5.36 -5.65 -0.52 -0.28 0.22 0.2 0.2 0.21 0.56 -0.17 -0.14 -0.05 0.03 0.27 0.39 0.03 -0.19

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.