Heatmap: Cluster_154 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- - - 1.0 0.36 - - 2.79 - - - 2.0 - - 2.17 - 1.8 - - 3.21 - 1.84 - - 1.54 2.34 - - - - - - - - - - - - - - - - 1.75 - - - - 0.72
- - - - - 4.53 - - - 1.37 - - 0.7 - 1.62 - 2.88 - - - - - - - - 0.12 0.97 - - 0.3 0.7 - -2.07 - - - 1.71 - - - - - - - - -0.2 - -
- 4.86 - 3.17 - - - - - - - - - - 2.49 - - - - - - - 1.32 - - 0.88 - - - - - - - - - - - - - - - - - - - - - -
- 1.27 - -1.19 -2.02 1.83 -0.7 - - -0.72 0.01 - 1.93 -0.75 -0.81 - - -1.03 - - - 0.09 - - 0.58 - 0.44 2.12 0.13 -1.29 0.36 0.94 0.23 0.31 0.54 -0.47 0.37 2.25 - 0.2 0.46 0.3 0.19 - - 1.62 0.16 -0.1
0.8 1.83 -1.19 -2.0 1.4 -1.93 -0.26 -0.05 0.85 -0.41 -6.34 - -0.58 -1.19 2.19 -0.16 -0.59 0.25 -2.06 -1.84 -0.89 -0.36 -1.28 -1.91 -2.13 -1.66 -1.95 0.58 -0.06 1.21 0.84 -0.13 0.61 0.05 -0.36 1.06 1.01 0.07 -0.07 -0.21 -6.82 -4.13 -0.36 -0.68 -0.08 -0.36 -0.12 0.15
1.73 -2.73 -2.88 -3.15 1.91 -2.97 -2.79 -1.22 - 0.3 - -3.07 1.02 0.43 2.08 - -0.36 -2.4 -1.65 0.82 0.61 1.61 -2.49 -0.37 0.35 -0.17 -0.42 -0.27 -0.29 1.11 -0.32 -1.09 0.19 -3.72 -0.3 -0.04 0.13 -0.29 -0.81 -0.51 0.06 - 0.92 0.86 0.55 -0.75 -1.03 -0.35
- - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 0.99 2.76 - 2.47 - 1.13 - - - - 1.24 - - - - - 3.03 - - - 1.3 - - - - 0.03 1.33 - - - - 0.72 - - - - 3.2 - - - - - 1.67 -0.14
-3.76 - - -2.94 - - - - - 1.2 0.13 -1.09 0.54 -0.62 1.97 - -3.51 - -1.43 -0.9 0.17 0.82 - - - - 2.01 0.64 1.02 0.3 -0.2 1.82 1.44 0.96 0.9 1.73 0.98 -1.51 - -0.72 0.3 -1.0 0.84 0.42 0.2 -2.04 -0.06 -0.38
- 1.62 -1.04 -0.2 3.81 - - - - -0.52 -0.63 - 1.28 - 0.47 -1.04 - - - - - 2.3 - - 1.89 - -0.4 -1.4 -6.61 0.04 - - -2.58 - - - - - -0.73 1.03 0.68 -0.3 -1.62 -0.21 -0.58 2.42 -1.48 -1.69
-2.18 1.0 1.56 2.22 - 0.3 0.18 -0.09 -0.01 0.12 - - 0.39 0.25 0.24 1.18 0.44 -0.44 0.54 0.62 0.35 0.44 -2.27 -0.68 -1.8 1.33 - -0.43 - -0.23 -2.18 -1.02 0.01 1.15 -1.42 0.47 -0.49 -0.55 0.26 - -0.06 - - 1.22 - 0.3 - 0.1
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - -
- - - 0.68 0.02 - 2.33 - - 1.54 2.25 - - 1.7 -0.26 - 1.58 - - 1.37 - - - - - - - 1.34 - -1.97 - 1.94 -0.75 1.07 - - - - - 1.62 - - - 1.74 - 2.86 - -
-2.39 1.03 -1.37 2.33 3.13 -1.22 -0.93 -2.79 - 0.85 -1.25 -0.54 -0.58 -0.57 -1.68 1.47 -1.1 -0.82 - -1.48 -1.01 -0.25 - 1.27 1.61 2.25 1.98 -1.89 -2.73 -1.93 -0.39 -1.43 -2.2 -2.22 -1.91 -1.89 -1.08 -1.32 - -1.15 -2.06 -3.8 -1.56 -2.19 -2.49 -0.65 -2.17 -2.01
- - - - -0.22 - - - - -1.26 -0.2 - - - 1.93 - 0.27 - - 2.22 3.82 2.34 - 2.2 2.92 0.12 - 0.08 - -1.48 - - - 0.15 - - - - - - - - 0.3 - - - - -
- - - - 4.82 - - - - - - - - - - - - - -2.79 4.2 0.36 - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - -0.07 - 3.25 0.51 - 0.86 0.53 -1.33 - - -2.65 - 0.26 -1.7 -1.9 -2.98 -0.9 1.88 1.62 2.32 -0.97 -1.83 -1.21 - -0.46 0.41 0.71 -1.45 -0.67 -0.11 0.33 0.61 -9.19 -0.24 0.49 -1.67 -1.43 -1.0 -0.68 -1.7 0.12 - 0.48 -1.22 -0.48 -1.01
1.99 2.33 1.92 -0.92 - - - - 3.55 - - - - - 2.33 -0.12 - -0.64 1.37 0.91 2.83 - - -0.47 - 0.61 - - - 0.87 - - - - - - - -1.21 - - - - - - - - - -1.89
- - - - - - - - - 1.79 2.78 4.27 - - - - - 1.93 - - - - - 1.9 1.4 - 1.5 - - -1.14 - - - - - - - 2.31 - - - - - - - - - -
- - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.2 - 0.49 - 3.75 2.06 - - - - - 0.92 - - - 3.79 - - - - - - - - - - - - 0.66 - - - - - - 1.28 - - - 0.98 - 1.43 - - - - - -
-1.72 0.15 -1.13 1.18 0.38 0.31 -1.35 -0.54 -3.11 -0.17 -3.05 -3.23 -1.15 -1.11 1.49 -1.98 -0.37 -0.73 -0.85 -0.37 0.27 0.51 - -2.62 -1.18 -0.96 -1.61 0.72 1.36 1.09 0.79 0.16 0.95 1.07 0.74 1.6 0.23 -0.82 0.67 -0.72 -2.47 -3.71 -1.45 -0.01 0.2 -1.29 0.94 0.36
- - - - - - - - - - - - - - 2.73 4.54 2.32 - - - - - - - - 3.64 - - - -0.51 - - - - - - - - - - - - - - - - - -
- 1.08 1.21 0.73 -2.96 -0.11 -0.78 1.64 - 1.49 0.03 0.55 -0.83 -1.66 -0.63 0.02 -1.13 -0.88 - 0.5 -1.14 1.05 - 0.04 0.25 -1.37 -0.19 -0.6 - -0.48 -0.02 1.01 -0.67 -0.6 -1.16 0.37 0.83 1.22 -0.21 -1.41 0.57 -0.69 -0.26 - -1.43 0.34 0.98 0.66
- - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 1.43 -1.22 -3.04 1.15 -0.85 - 1.15 0.96 - - -0.94 0.45 1.34 - -0.81 -0.64 - -1.51 -0.22 0.65 - -0.15 - 0.75 -1.89 - 1.08 1.76 - - -0.64 0.83 -1.26 1.11 - 1.36 -1.4 2.42 -1.56 - 0.69 0.66 -0.13 0.81 0.13 -1.14
-0.39 0.47 1.7 -3.34 1.45 0.88 - - - -0.9 -2.85 - -0.72 -2.62 0.7 -0.8 0.97 0.4 -1.26 0.89 2.04 1.32 - -2.4 -2.31 -0.92 -2.79 -0.2 0.99 0.88 0.1 0.15 -0.02 0.95 -2.7 1.17 -0.56 -1.52 - -0.31 -2.01 -0.64 -1.52 -0.9 - -1.52 1.05 1.52
- - - - - - - - - - - - - - 5.27 - - - - - - - - - - - - - - 3.23 - - - - - - - - - - - - - - - - - -
- - - - 3.35 - - - - 0.23 - 1.77 0.95 -15.03 2.12 - - - - 0.76 -1.05 0.09 - - - - - - -12.58 0.32 -5.36 2.15 1.56 -2.31 - - 2.01 - 2.78 0.43 -1.4 - - 0.49 - - -24.7 -0.28
-0.7 0.03 0.09 -1.65 1.55 -1.23 -3.19 0.06 -1.36 -0.07 -0.66 -1.27 -0.55 -0.09 1.07 0.2 1.17 0.8 1.05 1.65 1.26 1.48 0.82 -0.59 -0.8 0.48 -0.08 -1.5 -1.25 0.11 -0.96 -0.05 -0.63 -0.5 -1.85 -1.15 -0.84 -0.8 -0.55 -0.33 -0.32 -0.11 -0.32 -0.61 -1.2 -0.47 -0.87 -0.76
- - - - 0.39 2.17 - - 1.68 0.15 1.32 - 1.0 1.6 -0.22 - - 1.33 - - - 1.83 - - 3.45 1.33 - - 1.27 -1.86 0.84 - - - - - - 1.31 - - - - - - 1.07 - - -0.07
2.43 -1.04 0.83 -1.41 4.34 - - - -2.52 - - - - - - 1.89 2.5 - - 2.74 - -0.33 - - - 0.99 - -0.42 - -4.96 - - - - - - - - - - - - - - - - - -
- - - - - 0.45 -0.57 - - -0.24 1.25 - -2.05 - 0.05 - 0.02 - 1.31 2.88 2.6 2.46 - - 0.89 - 1.01 - 1.16 0.83 0.27 0.27 0.46 0.61 0.77 -1.14 -0.67 - - -0.62 -1.31 -1.43 - - - - -1.61 0.4
- - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
3.0 - - - - - - - - - - 3.67 - - - - - - - - - - - - - 3.02 - - 3.59 - - - - - 2.83 - - - - - - - - - - - - -
- - - - 4.45 - - - - - - 4.0 - - - - 2.34 - - - - - - - - 2.34 - - - - - - - - - - - - - - - - - - - - - -
- - 0.27 3.17 - - - - - 2.04 0.99 - - - 0.24 - - 0.27 - - - - - 2.98 2.06 2.45 2.67 1.13 0.8 - - - - - - - - - - - - - - 0.57 - - - -
- - 2.03 - - - - - - - - - 2.31 - 2.73 - - - - - - - - - - 2.63 - - - 1.29 - - - - - - - 3.92 - - - - - - - 3.1 - -
- - 3.09 - - - - - - - - 4.35 - - - - 4.14 - - - - - - - - - - - - 0.58 - - - - - - - - - - - - - - - - - -
-0.84 -2.3 -1.24 0.15 -0.98 - - - 0.38 0.39 1.56 0.39 0.67 -0.52 0.95 -0.36 -0.64 0.13 -1.34 0.35 -0.76 1.13 - -1.54 0.95 0.07 1.35 -0.42 -0.3 0.63 0.87 0.79 1.38 0.33 0.13 0.32 -0.08 -2.67 -1.02 -2.07 -0.58 -0.8 0.9 - -0.85 -2.8 0.38 0.55
- - -0.9 -0.69 -0.15 0.9 0.9 1.26 0.77 0.48 0.49 -0.79 -0.72 -0.96 0.19 0.73 0.05 -0.5 -1.24 -0.72 -0.11 0.27 - -0.11 -0.02 0.37 0.56 1.39 -1.71 0.36 0.28 0.6 0.18 0.21 -1.14 -0.11 -0.05 -0.85 -1.72 0.0 -0.25 -0.75 0.09 0.4 -0.64 -0.48 -0.19 0.79
- - - - - - - - - - - 4.19 2.99 - 1.83 - - - - - - 3.65 - - - - - - - - - - - - - - - - - - - - - - - 2.52 - -
- - - - 0.48 1.43 - - - 2.75 - -0.71 2.04 -0.26 2.53 - - - - 0.87 - - - - - - - -0.32 - 0.23 1.03 - 0.72 -0.2 - -0.35 - - 0.4 0.35 - 1.32 1.8 0.07 - 1.43 -0.35 1.84
- - -0.11 - - - - - 3.29 2.38 - - - - 0.59 - 0.48 - - - 0.92 1.6 - 2.73 0.68 - - - - -0.62 - - - - - - - 2.26 - 1.35 - - 0.98 - - 2.61 - -
- - - 3.06 4.15 - - 3.58 - - - - - - - - 3.32 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.16 0.38 -0.92 -1.64 1.17 -2.53 -4.48 -2.55 -1.81 0.18 -4.03 - 0.45 -2.35 2.61 -2.18 1.59 0.58 0.99 1.77 1.02 3.25 -4.66 -1.47 -4.23 -3.33 - -2.85 -2.88 -0.12 -1.53 - -2.1 -1.69 -1.16 -3.65 -5.0 0.34 -2.7 -0.81 -0.27 -1.62 0.41 -1.93 -2.93 0.88 -1.67 0.78
- -3.2 -3.49 0.92 3.04 -0.12 -0.84 -4.02 - -0.03 0.62 0.03 0.33 -2.05 0.39 -1.43 -3.38 -4.96 - -0.05 0.44 0.83 - -2.1 1.27 - 1.29 -0.09 1.31 0.46 0.63 0.33 0.57 0.15 1.03 0.82 0.25 -1.72 -3.71 -1.23 -1.29 -1.51 -1.03 -0.48 -1.45 -2.82 0.1 -0.85
- - 1.45 - - 0.44 - -1.18 - 0.99 2.71 2.09 -0.86 0.04 1.44 - - -0.12 - - - -0.41 - 2.76 0.08 2.44 0.47 - -0.38 -1.48 -1.56 -1.57 -2.24 - -1.76 - -1.27 -1.55 0.99 -0.64 - -1.22 - 1.35 - 0.03 -1.35 -
- - - - - - - - - - - - - - 1.29 - - - - - - - - - - - - - 3.79 2.85 - - - 4.62 - - - - - - - - - - - - - -
- - - - 3.89 - - - - - - - - - - - 3.12 - - - - - - - - - - - 3.96 - - - - - - - - - - 3.16 - - - - - - - -
- - - - - - - - - -5.74 - 1.5 4.46 - 2.15 - - - - - - - - - - - - - - - - - - - - - - - 4.22 - - - - - - - - -
-0.7 0.74 -2.63 -1.09 0.26 -3.75 -3.52 -4.37 -2.34 -0.09 0.64 -0.73 -0.05 -0.28 2.04 -1.94 -0.1 -0.87 -0.85 0.73 -0.69 -0.11 - -2.77 0.45 -0.98 0.57 -0.59 0.37 0.61 0.01 0.32 -0.03 -0.1 2.79 -0.14 0.2 -1.91 -0.12 -1.27 0.42 -1.09 -0.44 -0.05 -0.41 -1.13 -0.14 0.7
-3.89 - - - -4.06 - -2.67 -3.76 -1.97 0.36 0.77 -0.2 -0.44 0.98 2.33 -4.14 -1.74 -5.13 -4.09 - -4.2 -1.91 - - 0.62 -1.8 2.27 -4.88 0.9 0.47 -2.99 -0.55 0.99 1.94 -4.16 0.43 -0.32 -2.34 0.0 0.84 2.41 1.38 -0.16 -0.21 0.7 -1.88 -2.63 0.58
- - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - 3.54 - - - - -0.99 2.09 - - - - - - - - - - - - - - 2.22 - - - - - - - - 2.49 3.19 1.48 - - - 1.97 - - 2.47
- - - - 5.04 - - - - - - 3.91 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - 4.05 2.58 - 2.05 - - - - 2.79 - 2.22 - - - - - - - - - - - - - 3.28 - - - - - - - - - - - - - - - - -
- - - - - - - - - -16.48 -20.91 3.87 - - 1.79 - - - - - - - - - - - -7.98 -10.26 2.62 0.95 -6.73 -4.81 -0.95 -17.47 3.75 -13.16 -20.17 - -21.81 1.0 2.53 -4.31 -6.03 -10.61 -9.46 - -16.71 -16.13
- 0.02 -0.45 -1.66 2.88 0.36 -0.08 -1.52 - -0.13 -0.66 -1.66 -0.53 -1.11 1.41 0.3 0.08 -2.15 -1.72 1.9 1.29 1.93 - -0.63 -0.07 -1.33 -1.36 -1.04 -0.78 0.24 -1.01 -0.11 -0.22 -0.35 -0.3 0.33 -2.93 0.09 -1.31 -1.06 -0.03 -0.63 -0.3 0.07 -2.04 -1.99 -1.09 0.24
-2.49 -2.87 -3.4 -1.98 -4.04 - -4.96 - -3.21 0.73 -0.01 -0.24 -0.57 -1.78 0.84 -2.39 -0.72 -1.13 0.71 1.37 0.87 1.31 - -5.76 1.59 -2.38 1.29 0.46 0.45 0.0 0.31 0.92 0.39 0.21 2.37 0.48 0.22 -0.53 -1.55 -0.37 -0.56 -0.6 -0.24 -0.15 -0.78 -0.13 0.13 -0.15
-2.63 -1.45 -0.39 0.55 3.29 -0.86 - 0.93 - 0.28 1.38 1.03 -1.85 - 0.72 - 0.04 -0.8 -1.28 1.32 -0.17 1.52 - -0.38 -0.45 0.45 0.17 -2.31 -0.58 -0.23 0.3 0.69 -0.55 0.5 -0.02 -0.31 -0.49 - -0.28 - -1.03 - -2.11 - -0.87 -2.14 -0.65 -0.27
- - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 4.29 - - - - - - - - - - 4.44 - - - - - - - - - 2.74 - - - - - - - - - - - - - - - - - - - - - -
- - - - - 1.48 - - 1.1 1.73 - - - - 0.07 - - - - - - - 1.65 - 2.59 - - - - - 1.41 - 1.46 2.79 1.45 1.87 - - - - 2.26 1.52 1.67 - - - - -
1.5 -0.76 1.56 -0.11 -0.7 -1.52 - -1.91 3.19 -1.19 - -0.96 -0.09 -2.14 1.64 0.44 1.09 -0.72 2.25 -2.02 0.57 1.17 - - - 1.89 - -1.74 -2.69 -0.83 0.34 -0.74 -1.07 -1.41 - - -2.23 -0.18 -1.6 0.1 -0.77 -1.02 -1.85 -2.56 - -1.29 - -1.3
- - -2.13 -3.98 2.45 -2.07 -0.98 -1.46 -2.17 -0.64 -0.2 0.52 -1.73 -2.38 1.34 - -0.7 -2.53 0.24 0.95 2.17 1.77 -2.91 -2.7 0.17 -1.69 -0.81 -0.24 0.36 1.24 0.06 0.34 0.39 0.33 0.82 0.74 -0.52 -0.92 -1.15 -0.6 -0.87 -1.56 -0.91 -1.05 0.01 -0.48 -0.39 0.38
- - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - 1.94 - - - - -0.12 - 3.09 4.27 - - - - - - 2.92 - - - - - - - - - - - - - - - - 2.97 - - - - - -
- - - - 2.33 - - - - - - 5.07 - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.22 - - - - - - - -
-1.15 0.07 -2.9 -3.27 -1.46 0.2 -0.12 -0.03 0.1 0.07 -6.11 -5.3 0.32 -0.55 1.4 -1.94 -1.36 -1.01 -2.24 -1.26 -0.53 -0.33 -6.38 -2.78 -1.16 -2.78 -2.93 0.51 1.48 0.35 1.09 -1.2 1.15 0.39 0.3 0.94 1.54 0.43 0.85 0.81 -3.26 -1.79 0.5 0.47 1.55 0.42 0.23 -0.28
- - - - - - - - - - - - - - 1.82 - - - - - 2.0 - - - 2.19 - - - - -0.65 - - 2.09 - - - - 2.57 - - - - - 3.81 1.74 2.63 - 0.61
- - 2.96 - - - - - - -0.1 1.5 0.21 - - 0.45 - - 1.86 - 0.63 0.71 0.53 - 3.64 - 2.84 1.68 - - - - - - - - - 0.41 0.56 - - - - - - - - - -
- - - 0.73 0.33 2.61 - - - - - - 0.09 0.74 1.66 - 1.12 - - 0.96 - - - 2.39 1.5 2.93 2.97 -2.24 - -2.01 - - -0.08 - - -0.03 - - 0.23 - - - - - - - 0.46 -0.99
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - -
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.