Heatmap: Cluster_347 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo169184 (PACid_15422826)
0.17 0.05 0.19 0.01 0.01 0.21 -0.19 0.01 0.11 0.03 0.06 -0.14 0.09 0.34 0.69 0.13 -0.24 -0.06 0.17 -4.13 -0.73 -2.43 -0.15 -0.36 0.1 0.39 0.48 0.43 -0.27 -0.24 0.03 0.36
Smo90855 (PACid_15415699)
-0.21 -0.01 -0.21 0.01 -0.33 0.01 0.12 0.18 0.3 0.04 0.05 0.01 -0.06 0.25 0.74 0.06 -0.23 -0.2 0.05 -2.06 -0.58 -2.2 0.12 0.15 0.12 0.42 0.55 0.36 -0.35 -0.17 0.01 0.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.