Heatmap: Cluster_146 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo107475 (PACid_15420826)
0.18 0.16 0.51 0.6 0.68 0.42 0.3 0.28 0.64 0.52 0.47 0.28 -0.34 -0.55 -0.6 0.11 -0.15 -1.1 0.53 -5.02 -5.19 -6.8 0.13 0.47 -3.33 0.78 -1.12 0.02 0.09 0.02 -0.06 -0.06
Smo109424 (PACid_15404119)
0.82 0.46 0.27 -0.07 -0.18 -0.34 0.25 0.11 0.41 0.51 0.73 0.58 0.84 0.39 -0.77 -0.27 -1.19 -0.49 0.01 -3.57 -4.32 -8.82 0.08 0.76 -1.38 -0.14 -0.44 -1.23 -1.01 -0.75 0.93 0.85
Smo111015 (PACid_15407156)
0.04 0.46 0.48 0.31 0.52 0.17 0.38 0.49 -0.12 -0.1 0.24 0.18 -0.13 -1.08 -0.99 0.19 -0.13 -1.09 0.45 -4.8 -4.98 -6.59 0.33 0.51 - 1.06 0.53 -0.13 0.26 0.2 0.03 0.22
Smo112042 (PACid_15410316)
-0.35 -0.37 -0.05 0.14 0.2 -0.21 0.71 0.65 0.34 0.51 0.27 -0.11 1.09 0.47 0.18 0.7 -0.22 -1.01 0.02 -1.59 -3.14 -3.35 -0.42 -0.37 -2.93 0.31 -0.0 -0.37 0.05 -0.01 0.35 0.24
Smo117300 (PACid_15404653)
0.7 0.38 0.23 0.31 0.15 0.33 0.03 0.17 0.17 0.37 0.18 0.49 0.26 0.43 -0.28 0.24 -0.6 -0.83 0.34 -1.9 -1.35 -1.82 -0.39 -0.33 -0.79 -0.14 -0.05 -0.12 -0.19 -0.19 0.25 0.42
Smo130474 (PACid_15421846)
0.68 -0.07 -0.03 -0.23 -0.24 -0.49 -0.26 -0.01 0.38 -0.1 0.24 0.08 0.07 -0.41 -0.33 0.21 -0.49 -1.08 0.46 - - -5.5 -0.41 -0.39 -1.81 1.0 0.63 0.5 0.13 0.17 1.31 0.96
Smo130534 (PACid_15422579)
0.77 0.22 0.04 -0.01 0.04 -0.32 0.07 0.13 0.2 0.33 0.38 0.36 0.02 -0.19 -0.17 0.19 -0.61 -1.14 0.43 -11.05 -10.6 - -0.28 -0.11 -5.32 0.6 0.31 0.18 0.08 0.15 1.12 0.84
Smo13113 (PACid_15405978)
-0.03 0.08 0.15 0.26 0.2 -0.03 0.69 0.58 0.37 0.44 0.5 0.23 0.91 0.35 -0.07 0.53 -0.16 -0.6 -0.02 -3.05 -2.23 -1.42 -0.36 -0.21 -1.5 -0.32 -0.88 -1.27 0.14 0.13 0.31 0.25
Smo131886 (PACid_15405573)
0.24 -0.0 0.25 0.39 0.41 0.3 0.5 0.7 0.85 0.73 0.82 0.42 -1.99 0.06 -0.41 -0.99 -0.01 -2.62 0.79 -5.8 -4.33 -3.38 -0.48 -0.54 -3.59 1.05 0.06 0.36 0.14 0.27 -0.38 -0.74
Smo136272 (PACid_15415686)
0.4 0.46 0.37 0.12 0.07 0.16 0.2 0.11 0.48 0.65 0.46 0.52 0.14 0.38 0.11 0.19 -0.49 -0.34 0.24 -0.91 -1.79 -3.51 -0.26 -0.15 -3.63 0.21 -0.84 -1.25 -0.2 -0.16 0.61 0.39
Smo139060 (PACid_15422765)
0.93 0.45 -0.07 0.12 -0.03 -0.23 -0.41 0.47 0.3 0.38 0.55 0.58 0.29 -0.89 -2.65 0.03 -0.06 -1.25 0.3 -2.66 -0.08 -5.13 0.04 -0.03 -0.02 -0.72 -0.36 -1.41 -0.2 -0.23 0.91 1.14
Smo13924 (PACid_15412195)
-0.06 0.17 0.45 0.29 0.19 0.21 0.62 0.76 0.63 0.68 0.42 0.16 0.51 -0.05 -0.86 0.52 -0.44 -0.91 -0.1 -3.43 -0.19 -5.45 -0.0 -0.25 -1.89 -0.04 -0.56 -0.51 -0.07 -0.31 0.54 -0.07
Smo146897 (PACid_15405067)
0.45 0.34 0.23 0.15 0.05 0.11 0.38 0.53 0.52 0.83 0.64 0.61 -0.21 -0.01 -0.53 -0.05 -0.34 -0.47 0.02 -0.84 -0.83 -2.55 -0.27 -0.13 -0.79 -0.24 -0.6 -0.79 -0.13 -0.04 0.27 0.14
Smo154156 (PACid_15423287)
0.85 0.07 -0.25 -0.34 -0.26 -0.27 -0.22 -0.14 0.25 0.33 0.25 0.35 0.13 0.19 0.36 0.56 -0.85 -0.62 0.56 -1.14 -1.49 -1.21 -0.69 -0.46 -0.53 0.25 0.1 -0.28 0.13 0.25 0.63 0.38
Smo15423 (PACid_15414275)
0.73 -0.11 0.3 -0.32 -0.32 -1.1 -0.18 -0.19 -0.22 0.18 0.02 0.36 -1.41 -1.63 -3.91 0.61 -0.34 0.47 1.56 - -2.9 -4.01 -0.34 0.32 -3.25 -0.42 -0.14 0.04 0.57 0.71 1.31 1.03
Smo161006 (PACid_15420902)
0.45 0.2 0.13 0.83 0.59 0.39 0.31 0.69 0.92 1.12 0.64 1.06 -2.14 0.28 -0.25 -1.24 0.03 -2.42 0.63 -4.95 -5.93 -2.8 -0.54 -0.95 -6.2 0.52 -0.56 -0.99 0.26 0.2 -0.42 -0.58
Smo17204 (PACid_15418467)
0.76 0.88 -0.18 -0.44 -0.61 -0.59 -0.4 0.21 0.12 0.61 0.44 1.06 0.86 -1.9 -2.57 0.66 -0.46 0.43 0.72 - -1.03 -5.87 -0.36 -0.23 -2.69 -0.04 -0.37 -1.19 0.68 0.41 0.65 0.06
Smo229886 (PACid_15413904)
0.63 1.27 0.78 0.31 0.35 0.44 1.04 0.65 1.38 1.67 1.34 0.65 -1.0 -0.39 -3.08 -1.69 -2.28 -1.2 -2.35 -1.41 -3.15 -2.7 -1.0 -0.93 -3.34 -1.12 -1.06 -2.08 -2.29 -2.31 0.85 0.34
Smo231554 (PACid_15417560)
-0.15 0.16 0.08 0.34 0.39 0.34 0.59 0.64 0.54 0.44 0.33 0.09 -0.31 0.67 0.2 0.14 0.35 -0.06 0.63 -2.98 -2.74 -4.03 0.14 -0.23 -0.95 -0.09 -0.35 -0.31 -0.06 -0.04 -0.51 -1.04
Smo231555 (PACid_15417561)
0.02 0.4 0.19 0.58 0.53 0.39 0.66 1.02 1.01 0.88 0.78 0.46 -2.64 0.02 -0.62 -1.7 0.54 -0.03 0.66 - - - 0.03 -0.73 -5.76 0.02 -1.04 -1.05 0.2 0.26 0.04 -0.8
Smo231673 (PACid_15418384)
0.61 0.56 0.46 0.4 0.28 0.17 0.39 0.24 0.2 0.42 0.15 0.16 -0.19 -0.17 0.21 -0.09 -0.68 -0.65 -0.0 -5.16 -5.21 -4.7 -0.27 0.01 -4.2 0.49 -0.21 -0.28 -0.26 0.11 0.95 0.77
Smo24657 (PACid_15420081)
0.24 0.33 0.46 0.51 0.09 0.35 0.73 0.57 0.56 0.59 0.42 0.34 0.47 0.42 -1.11 0.61 -0.48 -0.14 0.08 -3.75 -2.19 -3.26 -0.18 -0.15 -2.81 0.15 -0.81 -0.91 -0.31 -0.27 0.28 -0.12
Smo270595 (PACid_15421103)
0.37 0.23 0.13 0.28 0.27 0.2 0.05 0.38 0.48 0.51 0.45 0.4 0.07 -0.35 -0.23 0.1 -0.47 -1.24 -0.52 -0.76 -1.06 -0.56 -0.04 0.05 -0.1 -0.02 -0.33 -0.75 -0.63 -0.62 0.37 0.81
Smo31439 (PACid_15416956)
0.98 1.06 1.25 1.26 -0.73 0.75 0.52 1.01 1.67 0.91 0.97 0.71 - -0.48 -4.7 - 0.64 -3.42 -0.72 - - - -0.09 -1.17 - 0.88 -1.95 -2.19 -0.3 -0.92 -0.72 -3.13
Smo33608 (PACid_15401917)
0.75 0.58 0.31 0.34 0.27 0.16 0.07 0.21 0.34 0.51 0.52 0.58 0.38 -0.21 -0.65 0.64 -0.11 -0.83 0.42 -6.36 -4.59 -4.74 -0.2 -0.24 -3.89 0.13 -0.35 -0.6 -0.19 -0.14 0.32 0.63
Smo37919 (PACid_15415977)
0.61 0.37 0.35 0.28 0.08 -0.02 0.19 0.4 0.37 0.92 0.7 0.54 0.26 -0.01 -1.22 0.57 -0.51 0.39 -0.0 -1.05 -0.25 -0.61 -0.49 -0.55 -2.22 -1.38 -1.89 -1.99 0.25 0.33 -0.03 -0.16
Smo3969 (PACid_15416770)
0.95 0.5 0.36 0.32 -0.02 -0.14 -0.37 -0.27 0.41 0.14 0.63 0.74 -0.11 -0.56 -0.71 -0.17 -0.28 0.31 0.27 - - - 0.71 0.51 -3.07 0.3 -0.74 -0.43 0.36 0.22 0.14 0.37
Smo402451 (PACid_15404244)
0.89 1.6 1.04 0.69 1.22 0.99 0.83 0.36 1.13 1.37 0.95 0.41 -1.05 -0.7 -2.46 -0.77 -2.2 -1.42 -1.75 -5.27 -6.41 -5.55 -0.54 0.24 -4.84 -1.49 -0.24 -0.78 -2.83 -2.59 -0.49 -0.9
Smo404967 (PACid_15414154)
0.64 0.41 0.0 0.1 0.04 -0.14 -0.07 0.26 0.44 0.54 0.64 0.54 -1.41 -0.24 -0.24 -0.37 -0.29 -1.05 0.13 -3.21 -2.88 -4.62 -0.27 -0.21 -2.11 0.53 0.32 0.31 -0.01 0.12 0.99 0.73
Smo405025 (PACid_15410022)
0.74 -0.05 -0.3 -0.21 0.02 -0.25 -0.17 0.14 0.01 0.24 0.12 0.14 0.09 -0.05 -0.67 0.35 -0.86 -0.97 0.21 -0.4 -2.03 -0.85 -0.77 -0.53 -2.45 1.23 0.96 0.54 -0.1 -0.07 0.52 0.3
Smo405879 (PACid_15416262)
0.24 0.03 -0.11 0.17 0.24 0.23 0.26 0.4 0.23 0.2 0.33 0.16 0.14 -1.04 -1.05 -0.05 0.17 -0.33 0.96 -1.92 -1.96 -1.84 0.16 -0.06 -1.66 -0.11 -0.42 -0.11 0.17 0.38 0.62 0.6
Smo410723 (PACid_15407837)
0.62 0.34 0.2 0.35 0.05 0.2 0.14 0.45 0.58 0.53 0.61 0.44 0.4 -0.24 -0.11 0.48 -0.46 -0.86 0.25 -3.71 -1.9 -6.59 0.04 -0.05 -4.53 -0.3 -0.49 -0.66 -0.26 -0.22 0.62 0.66
Smo414731 (PACid_15419659)
0.72 0.46 -0.19 0.0 -0.13 -0.08 0.16 -0.09 0.36 0.62 0.43 0.17 -0.13 0.6 -0.31 0.22 -0.11 0.14 -0.34 -2.06 -0.54 -0.5 0.16 0.3 0.23 -1.3 -0.88 -1.02 -0.14 -0.04 0.18 0.09
Smo415138 (PACid_15417990)
0.91 0.14 0.01 -0.16 -0.06 -0.21 0.21 0.61 0.56 0.95 0.88 0.81 0.56 -1.75 -3.33 0.31 -0.21 -0.81 0.43 -4.07 -2.08 -2.77 -0.08 -0.04 -1.02 -0.09 -1.15 -1.53 0.26 -0.04 0.63 0.5
Smo424843 (PACid_15405251)
0.8 0.18 -0.06 -0.0 0.31 0.18 0.07 0.28 0.4 0.61 0.55 0.43 -0.04 -0.41 -0.64 -0.07 -0.45 -0.27 0.08 -3.66 -1.04 -3.32 0.56 0.88 -0.96 -0.24 -0.83 -1.42 0.18 -0.03 0.56 0.1
Smo438593 (PACid_15421937)
0.22 0.36 0.2 0.34 0.12 -0.04 0.23 0.18 0.29 0.3 0.3 0.25 0.12 -0.1 -0.09 0.45 -0.11 -0.97 0.61 -1.5 -1.82 -1.52 -0.04 0.15 -0.19 0.36 -0.04 0.04 -0.25 -0.07 -0.08 -0.62
Smo441219 (PACid_15406244)
0.37 0.62 0.21 0.28 0.22 0.19 0.44 0.28 0.51 0.69 0.44 0.68 -0.08 -0.17 -0.47 0.17 -0.74 -0.7 0.25 -1.96 -0.76 -4.37 -0.47 -0.43 -0.56 -0.06 -0.09 -0.14 -0.23 -0.09 0.07 0.2
Smo441782 (PACid_15410313)
0.58 -0.03 -0.16 -0.02 -0.06 -0.04 0.21 0.2 0.34 0.35 0.53 0.41 -0.68 -0.73 -1.81 -0.06 -0.64 -1.0 1.28 -5.31 -2.58 -5.22 -0.33 -0.06 -2.3 0.41 0.05 0.03 -0.21 -0.15 1.41 1.05
Smo444345 (PACid_15415932)
0.45 0.21 0.04 -0.04 0.02 -0.13 0.03 0.14 0.34 0.54 0.37 0.49 0.13 0.12 -0.27 0.51 -0.57 -0.21 0.07 -1.55 -1.26 -1.84 -0.33 -0.01 0.14 -0.18 -0.79 -1.06 0.22 0.13 0.55 0.49
Smo446098 (PACid_15419552)
0.29 0.26 0.24 0.24 0.24 0.16 0.35 0.28 0.58 0.61 0.69 0.56 -0.17 0.01 -0.62 1.03 -0.08 -0.89 -0.45 -1.38 -1.17 -1.62 -0.09 -0.13 -0.81 -0.19 -0.36 -0.27 -0.14 0.0 -0.29 -0.47
Smo448668 (PACid_15407477)
0.74 1.07 -0.13 -0.52 -0.61 -0.78 -0.67 -0.03 0.27 0.51 0.83 1.1 -2.97 -4.28 -4.17 -1.41 -0.75 0.65 0.46 - -3.31 -6.64 -0.72 -0.54 -1.67 1.15 0.69 0.94 0.79 0.55 0.52 -0.05
Smo5251 (PACid_15417237)
1.33 -0.27 -0.84 -0.9 0.18 -1.76 -0.66 -0.46 0.25 0.97 0.41 0.99 0.06 -0.62 -4.33 -0.14 -0.65 0.14 0.98 - - - -0.59 -0.49 -5.05 -0.01 -0.45 -0.97 1.08 0.71 1.36 0.99
Smo56081 (PACid_15420660)
1.06 0.7 0.68 0.58 0.8 0.84 0.6 0.58 1.19 0.99 0.54 0.7 0.21 -0.65 -0.8 0.27 -0.73 -0.75 -0.22 -2.0 -1.03 -3.1 -0.71 -0.36 -0.78 -3.8 -4.08 -2.75 -0.77 -0.57 -0.6 -0.6
Smo61948 (PACid_15420046)
0.32 0.52 0.4 0.27 0.14 0.22 0.47 0.42 0.37 0.52 0.64 0.43 0.63 -0.38 -1.44 0.74 0.12 -0.76 -0.48 -3.68 -2.53 -2.82 0.49 0.39 -2.88 -0.2 -0.74 -0.66 -0.04 0.02 0.34 -0.3
Smo68039 (PACid_15411313)
0.65 0.18 0.29 0.07 0.05 0.13 -0.04 0.18 -0.11 0.41 0.07 0.53 0.19 -0.07 0.23 0.07 -0.17 0.27 0.2 -4.18 -3.56 -0.58 -0.1 0.22 -0.71 0.31 -0.41 -0.47 0.05 -0.1 0.27 0.11
Smo77165 (PACid_15416372)
0.52 0.55 0.12 0.13 0.15 -0.22 0.41 0.29 0.54 0.89 0.58 0.64 0.01 -0.94 -1.63 0.36 -0.67 -0.07 0.49 -3.23 -3.46 -5.52 0.21 0.35 -2.11 -0.04 -1.47 -0.85 0.87 0.46 0.04 -0.12
Smo9108 (PACid_15405673)
1.06 0.22 0.31 0.28 -0.07 0.2 0.27 0.3 0.1 0.09 0.48 0.06 0.8 -0.25 -2.41 0.77 0.41 -5.39 0.3 - - - -0.24 -1.48 - -0.43 -0.81 -1.15 0.77 0.43 1.13 0.94
Smo91734 (PACid_15417760)
0.36 0.37 0.31 0.26 -0.04 0.02 0.15 0.28 0.29 0.48 0.06 0.12 -0.13 -0.14 0.06 -0.05 -0.68 -0.94 0.24 -3.48 -3.67 -6.09 -0.08 0.15 -2.1 0.75 -0.05 -0.38 -0.26 0.08 1.07 0.93
Smo92456 (PACid_15418435)
0.64 0.46 0.42 0.3 0.39 0.27 -0.01 0.25 0.43 0.45 0.57 0.59 0.37 -0.17 -0.3 0.27 -0.55 -1.08 -0.09 -1.43 -1.85 -5.5 -0.06 -0.01 -1.65 -0.2 -0.43 -0.45 -0.43 -0.37 0.55 0.62
Smo92722 (PACid_15420644)
0.85 0.37 0.11 0.04 0.26 0.04 0.07 0.11 0.53 0.62 0.66 0.6 0.39 -0.01 -0.46 0.4 -0.75 -0.7 0.47 - - - -0.45 -0.35 -3.88 -0.26 -0.47 -0.48 0.09 -0.06 0.64 0.99
Smo97859 (PACid_15413911)
0.58 0.1 -0.23 -0.14 -0.19 -0.01 0.18 0.35 0.31 0.37 0.39 0.4 -0.79 -0.6 -1.47 -0.24 -0.64 -0.84 0.33 -5.25 -6.15 - -0.44 -0.2 -1.57 0.83 0.57 0.49 -0.2 -0.08 1.45 1.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.