Heatmap: Cluster_150 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo101401 (PACid_15403026)
0.36 0.38 0.67 0.46 0.01 0.44 0.7 -0.12 0.15 0.61 0.26 0.34 -2.25 -3.67 -4.71 -1.58 1.28 0.53 0.62 -0.63 -2.42 -0.23 -1.66 -1.59 -1.57 -0.88 -0.72 0.27 0.79 0.83 0.29 -0.69
Smo107369 (PACid_15420044)
0.14 0.52 0.71 0.58 0.49 0.68 0.43 -0.08 0.28 0.06 0.12 -0.16 -2.43 -2.75 -2.99 -1.86 1.27 1.24 -0.09 -6.02 -3.9 -10.97 0.82 -0.17 -1.65 -1.66 -1.4 -0.94 0.55 0.68 0.6 0.58
Smo108537 (PACid_15402081)
0.07 0.06 0.13 0.02 -0.06 0.01 0.16 -0.23 0.0 0.18 0.1 -0.03 -1.2 -0.23 -0.47 -0.84 0.61 -0.27 -0.47 -1.69 -2.92 -0.89 1.07 0.63 -4.74 -0.77 0.28 0.67 0.81 0.78 0.33 0.31
Smo111270 (PACid_15408895)
0.5 0.74 0.63 0.61 0.56 0.47 0.53 -0.11 0.42 0.33 0.34 0.22 -5.87 -5.69 -4.11 -3.8 1.61 1.17 -0.64 -3.86 -4.49 -4.92 -0.13 -1.17 -2.75 -2.05 -1.62 -1.0 0.83 1.0 0.78 0.31
Smo111388 (PACid_15409707)
-0.23 0.48 0.86 0.68 0.63 0.66 0.39 -0.05 0.09 0.38 0.13 -0.14 -2.75 -0.9 -0.05 -1.69 0.91 0.69 -1.21 -0.52 -0.55 0.02 0.76 -0.2 -1.4 -0.79 -0.68 -0.32 0.13 0.28 -0.87 -1.04
Smo113883 (PACid_15419387)
0.62 0.7 0.64 0.76 0.75 1.09 0.78 -0.29 0.44 0.12 0.22 0.12 -6.54 -8.28 -6.97 -5.68 1.71 1.65 -2.6 - -3.2 -7.51 0.5 -2.2 -4.2 -3.09 -0.3 0.08 0.8 0.83 -1.32 -2.21
Smo121275 (PACid_15416177)
0.85 0.69 0.39 0.32 0.23 0.16 -0.2 -0.06 0.04 -0.06 0.29 0.09 -3.08 -1.66 -1.8 -2.1 1.02 0.15 -0.9 -2.17 -3.71 -2.45 0.96 0.35 -0.73 -1.9 0.49 0.42 0.93 1.05 -0.25 -0.18
Smo13019 (PACid_15405213)
0.57 0.63 0.8 0.48 0.29 0.41 0.5 -0.2 0.29 0.29 0.35 0.0 -0.51 -0.24 -2.39 0.13 0.91 0.86 0.11 -7.85 -3.37 -1.82 0.53 -0.43 -1.81 -2.04 -1.07 -0.6 0.41 0.51 -0.11 -0.44
Smo138695 (PACid_15402256)
1.07 0.62 1.01 0.47 -0.9 -0.32 -0.43 0.26 0.29 0.46 0.37 0.76 -5.8 -6.69 -9.22 -4.3 0.62 -0.16 0.02 -2.32 -0.24 -4.6 -0.65 -1.4 0.26 -0.22 0.7 1.13 0.56 0.51 -0.02 -0.45
Smo146861 (PACid_15404982)
1.0 1.07 0.71 0.29 -0.14 -0.01 0.09 -0.01 -0.02 -0.1 0.07 0.36 -3.63 -1.95 -2.55 -2.36 0.84 0.58 -0.69 -1.49 -1.05 -1.59 0.14 -0.33 -0.52 -1.45 0.41 0.67 0.66 0.7 0.38 -0.56
Smo164091 (PACid_15407448)
0.81 1.1 0.83 0.59 0.52 0.63 0.59 -0.33 -0.25 -0.73 -0.8 -0.29 -2.02 0.52 -0.03 -0.75 0.63 0.09 0.21 -1.91 -0.05 -5.97 0.42 -0.19 -0.49 -1.49 -0.48 0.46 0.1 0.18 -0.99 -1.43
Smo173020 (PACid_15411726)
0.09 0.14 0.4 0.59 0.54 0.59 0.48 0.23 0.04 -0.21 -0.15 -0.18 -0.49 0.11 0.42 -0.23 0.22 -0.0 0.15 -2.45 -0.95 -1.08 -0.19 -0.53 -0.43 -0.12 0.53 0.54 0.01 0.03 -0.49 -0.98
Smo174517 (PACid_15418417)
0.26 0.74 0.84 0.8 0.5 0.59 0.5 0.07 0.24 0.08 0.19 0.1 -6.4 -7.51 -7.05 -3.77 1.63 1.37 -2.35 -2.66 -4.03 0.23 -0.82 -1.93 -1.44 -2.25 -0.36 -0.1 0.67 0.67 -0.04 0.15
Smo182303 (PACid_15418218)
-0.07 0.85 1.03 0.77 0.79 0.94 0.46 -0.3 0.21 -0.13 -0.07 -0.64 -1.75 0.16 -8.03 -0.97 0.55 1.25 -0.33 -1.83 -1.49 -6.37 0.98 0.3 -0.9 -2.54 -0.8 -0.41 0.08 0.25 -0.66 -0.55
Smo232013 (PACid_15416503)
0.8 1.02 0.92 0.49 0.62 0.61 0.06 -0.25 0.06 -0.45 -0.07 -0.32 -2.4 -0.12 -0.06 -1.39 1.06 0.88 -0.07 -3.96 - -6.11 0.31 0.35 -0.99 -1.46 -0.31 0.16 0.28 0.65 -0.87 -1.27
Smo232422 (PACid_15419648)
0.29 0.76 0.61 0.53 0.99 0.52 0.39 -0.2 0.39 0.09 0.24 0.04 -3.31 -2.14 -2.03 -2.46 1.51 0.62 -1.48 -0.3 -1.64 -0.39 -1.47 -2.27 -2.52 -1.62 -0.64 -0.32 0.75 0.84 0.33 0.37
Smo232963 (PACid_15423456)
1.01 0.91 1.17 0.74 -0.16 -0.15 -0.3 0.49 0.37 0.66 0.92 1.01 -3.65 -4.25 -3.49 -2.19 0.43 -5.24 -0.6 -0.25 0.1 -7.15 -1.22 -2.39 0.4 0.34 -0.06 0.35 0.56 0.28 -0.83 -1.73
Smo23881 (PACid_15418765)
0.2 0.57 0.64 0.59 0.77 0.79 0.42 0.47 0.21 0.21 0.39 0.07 -0.91 -0.54 -0.88 -1.26 0.16 0.7 0.22 -5.79 -1.82 -3.12 -0.21 -0.61 -1.93 -1.68 -0.46 -0.1 0.29 0.61 0.24 0.36
Smo270557 (PACid_15421028)
-0.59 -0.35 -0.02 0.25 0.53 0.47 0.22 0.2 -0.11 -0.3 -0.23 -0.45 -1.44 -1.53 -1.64 -0.63 0.79 -0.03 0.54 -1.9 -0.39 -1.36 0.36 0.02 0.73 -0.35 0.51 0.44 0.66 0.71 -0.04 -0.1
Smo271409 (PACid_15423016)
-0.12 -0.01 0.3 0.18 0.09 0.25 0.2 0.11 0.07 -0.22 -0.01 -0.21 0.65 -0.15 -0.48 -0.71 0.51 -0.06 -0.7 -2.72 -1.81 -1.83 1.05 0.55 -0.97 -1.63 0.4 0.43 0.49 0.71 0.02 -0.21
Smo3012 (PACid_15409740)
0.01 0.4 0.16 0.11 0.56 0.83 0.42 0.37 0.18 -0.16 -0.17 -0.27 -0.73 -1.21 -0.24 -0.95 0.63 0.83 0.14 -2.8 -0.75 -1.61 -0.1 -0.33 -0.09 -1.98 0.09 0.15 0.3 0.4 0.13 0.28
Smo402598 (PACid_15405142)
-0.25 0.14 0.56 0.67 0.57 0.75 0.9 0.19 0.67 0.36 0.36 -0.13 -6.98 - - -5.35 1.65 1.41 -2.2 -4.93 -5.21 - -1.13 -3.84 -0.34 -3.7 -0.12 0.31 0.84 1.06 0.43 -0.21
Smo407081 (PACid_15416042)
0.18 0.6 0.8 0.78 1.03 1.01 0.6 0.29 0.64 0.37 0.8 0.1 -4.89 - - -3.82 1.66 0.84 -3.03 -3.52 -4.28 - -1.48 -4.3 -0.89 -2.04 -1.2 -0.17 0.43 0.78 0.63 -0.01
Smo407495 (PACid_15419124)
1.04 0.78 1.18 0.64 0.51 0.26 -0.99 -1.25 -0.2 -0.18 0.39 0.43 -1.49 -0.2 -1.03 -1.45 1.53 1.04 -2.87 -4.88 -3.01 -5.96 0.97 -0.78 -2.39 -2.63 -0.64 -0.28 0.71 0.55 0.01 -0.63
Smo409212 (PACid_15423095)
-0.02 0.47 1.15 1.16 0.86 0.99 1.06 0.42 0.46 0.35 0.22 -0.04 -1.61 -4.89 -2.14 -0.71 -0.15 -0.1 0.26 -1.58 -0.22 -0.39 -0.3 0.08 -0.51 -2.17 -1.22 -0.59 -0.04 -0.18 -0.49 -0.97
Smo411132 (PACid_15406254)
0.18 0.67 0.8 0.83 0.9 0.82 0.75 0.02 0.16 -0.16 -0.18 -0.25 -1.64 -2.38 -1.7 -1.74 1.59 0.89 0.25 -1.18 -2.83 -0.82 -0.43 -1.49 -1.19 -0.96 -0.84 -0.43 0.38 0.66 -0.57 -1.12
Smo411673 (PACid_15410256)
0.08 0.66 0.61 0.58 0.66 0.72 0.84 0.01 0.55 0.02 0.21 0.02 -2.82 -1.57 -0.29 -1.95 1.6 0.88 -0.88 -5.19 -4.79 -3.38 -2.23 -2.09 -1.48 -0.82 -0.33 0.0 0.81 1.18 -0.18 -1.11
Smo412299 (PACid_15410154)
0.24 0.33 0.56 0.73 0.55 0.67 0.22 0.21 0.12 0.19 0.07 0.3 -1.78 -2.42 -6.43 -1.45 -0.04 0.35 0.9 -3.88 -1.25 -6.87 0.72 0.04 -1.41 -0.43 0.05 0.13 0.47 0.49 0.18 0.28
Smo412497 (PACid_15411697)
-0.0 0.27 0.58 0.61 0.76 0.49 0.75 0.12 0.63 0.41 0.6 0.22 -1.06 -2.71 -2.64 -1.1 1.16 0.83 0.12 -5.53 -5.22 - -0.57 -1.73 -3.71 -0.73 -1.12 -0.17 0.71 0.81 0.44 0.25
Smo413483 (PACid_15414665)
0.42 0.37 0.37 0.44 0.63 0.97 0.42 0.25 0.17 0.07 -0.1 0.13 -0.2 -0.36 0.22 0.11 0.07 -0.21 0.31 - -0.63 -2.36 -0.11 -0.08 -2.68 -0.35 0.56 0.72 -0.24 -0.29 -0.84 -1.17
Smo413591 (PACid_15415425)
0.43 0.88 0.96 0.65 0.46 0.67 0.2 0.05 0.34 0.27 0.11 0.2 -0.12 -0.6 -0.09 -0.61 0.56 0.71 -2.01 -0.9 -0.18 -1.28 0.89 -0.44 -2.65 -1.9 -1.72 -1.37 0.06 0.03 -0.55 -0.66
Smo416857 (PACid_15403871)
-0.54 0.48 0.65 0.81 1.13 1.31 0.16 -0.55 -0.07 -0.95 -1.07 -1.57 -3.8 -6.26 -4.8 -3.26 0.87 -0.26 -0.38 -7.88 -1.79 -5.61 1.07 -0.14 1.28 -1.02 1.03 0.83 0.44 0.68 -0.91 -0.65
Smo419575 (PACid_15410552)
1.7 1.16 0.86 0.41 0.54 0.63 -0.9 -0.46 -0.16 0.22 0.35 0.34 -2.67 -1.38 -0.72 -2.91 2.06 1.38 -3.0 -1.47 -1.1 -2.02 -2.17 -3.11 -1.81 -3.29 -0.35 -0.77 -0.13 -0.21 -0.28 -0.8
Smo420481 (PACid_15413013)
0.63 0.7 0.85 0.66 0.58 0.39 0.53 0.01 0.24 0.08 0.48 0.23 0.71 -2.67 -0.03 -0.27 0.49 -0.33 -1.76 -6.37 - -2.04 1.44 -0.29 -3.2 -1.24 -0.91 -0.31 0.03 0.05 -0.33 -0.4
Smo424499 (PACid_15402327)
0.83 0.44 0.27 -0.04 -1.05 -0.74 -0.49 -0.22 0.4 0.31 0.57 1.0 -4.64 -2.83 -2.36 -4.14 0.87 -0.4 -1.12 -3.66 -2.61 - 1.75 1.31 -0.79 -0.03 -1.26 -1.33 1.06 1.01 0.18 -0.28
Smo431283 (PACid_15421433)
0.99 0.55 0.86 0.39 0.47 0.81 0.24 0.12 0.48 0.42 0.63 0.5 -6.75 - -4.97 -7.76 1.68 1.0 -3.45 - -1.83 - -2.05 -5.9 -2.77 -4.9 -0.51 -0.41 0.64 0.63 1.07 0.69
Smo437973 (PACid_15422000)
0.05 0.55 1.25 1.0 0.85 0.7 0.4 0.05 0.55 0.34 0.39 -0.31 -2.12 -3.1 -7.81 -2.2 -0.03 0.54 -0.75 -2.28 -1.61 -7.07 0.99 0.37 -0.49 -2.74 0.39 0.2 -0.23 0.27 -0.54 0.04
Smo438165 (PACid_15418947)
0.25 0.37 0.18 0.09 0.53 0.51 0.3 0.2 -0.01 -0.28 -0.13 -0.33 -1.09 -0.18 -0.63 -0.33 0.48 0.59 0.31 -1.92 -1.0 -0.86 -0.11 -0.08 -0.3 -1.19 0.1 0.02 0.35 0.35 0.28 0.39
Smo439136 (PACid_15421638)
-0.31 0.05 0.25 0.34 0.09 0.14 0.65 0.01 0.64 0.15 0.29 -0.15 -5.3 -5.91 -5.47 -4.95 0.54 0.88 -2.76 -1.67 -2.93 -1.93 0.86 1.3 -0.97 -3.22 0.0 -0.27 0.45 0.76 0.67 1.34
Smo439556 (PACid_15402485)
-0.11 0.56 0.84 0.73 0.61 0.64 0.78 0.18 0.26 0.14 -0.28 -0.13 -1.44 -0.77 -0.04 -0.54 0.34 -0.54 0.44 -0.34 -0.5 -0.65 -0.16 -0.61 -0.42 -1.03 -0.65 -0.24 0.23 0.32 -0.53 -0.42
Smo440934 (PACid_15408706)
0.25 0.46 0.59 0.61 0.74 0.87 0.25 -0.25 0.12 -0.06 -0.13 -0.41 -1.7 -2.13 -1.58 -0.94 1.3 0.39 0.65 -5.4 -1.75 -9.02 0.41 0.17 -0.04 -0.78 0.21 0.72 0.35 0.34 -1.49 -1.4
Smo441321 (PACid_15406972)
0.69 0.71 0.55 0.49 0.58 0.43 0.19 -0.1 0.3 0.23 0.13 -0.1 -0.82 -0.92 -2.18 -0.09 0.21 -0.01 -1.13 -0.96 -1.99 -0.58 0.89 0.67 -1.11 -1.25 -0.36 0.02 0.15 0.25 -0.2 -0.07
Smo446012 (PACid_15419357)
0.41 0.95 0.77 0.61 0.51 0.48 0.72 0.09 0.05 0.1 -0.09 -0.17 -1.25 -0.75 -1.47 -0.24 0.77 -0.07 -0.04 -2.65 -1.78 -5.59 0.25 -0.67 -0.95 -0.52 0.1 0.94 0.67 0.71 -1.94 -2.15
Smo56696 (PACid_15402894)
-0.23 0.24 0.35 0.29 0.67 0.73 0.67 0.63 0.37 0.25 -0.02 0.18 -0.9 -1.57 -1.49 0.35 0.25 0.36 0.67 -2.07 -2.93 - 0.23 -0.33 -1.23 -0.91 -0.4 0.37 0.43 0.3 -0.17 0.15
Smo64201 (PACid_15423277)
0.77 1.02 0.82 0.44 0.49 0.63 0.22 -0.05 0.57 0.45 0.12 -0.07 0.34 0.04 -6.49 0.19 0.25 0.6 -0.6 -5.85 -2.3 -8.89 1.13 0.34 -4.87 -1.59 -1.16 -0.62 -0.26 -0.16 -0.37 -0.47
Smo72363 (PACid_15403208)
-0.33 -0.08 -0.46 -0.13 0.14 0.37 0.53 0.97 1.23 0.35 0.83 0.09 -0.91 -1.62 -0.32 -0.72 -0.1 0.4 0.0 -3.02 -3.56 0.31 0.13 0.16 -2.17 -0.32 -0.09 -0.22 0.29 0.12 0.03 0.01
Smo74259 (PACid_15408281)
-0.08 0.25 0.45 0.38 0.36 0.63 0.17 -0.11 -0.32 -0.72 -0.44 -0.58 -0.88 -0.43 -0.16 -0.46 0.51 0.28 -0.25 -0.24 -0.57 -0.14 -0.28 -0.4 0.91 -0.71 0.76 1.03 0.08 0.15 -1.5 -1.5
Smo78556 (PACid_15422235)
0.51 0.54 0.53 0.49 0.5 0.31 -0.04 -0.36 0.15 -0.19 0.13 -0.11 -0.93 -0.09 -2.28 -0.23 0.24 0.06 0.29 -1.39 -1.69 -3.38 0.59 0.24 -1.29 0.21 0.16 0.44 0.24 0.38 -0.13 -0.06
Smo80725 (PACid_15407492)
0.28 0.37 0.28 0.17 0.26 0.29 0.44 0.1 0.65 0.66 0.68 0.62 -5.12 - -6.92 -2.44 0.98 0.76 -0.88 0.43 -1.71 0.6 -1.74 -2.25 -1.63 0.25 -0.62 -0.42 -0.04 0.04 0.74 0.42
Smo81583 (PACid_15409139)
0.34 0.71 0.86 0.86 0.87 0.58 -0.52 0.04 0.48 0.68 0.76 0.67 -2.36 -1.84 -1.13 -2.22 1.27 0.84 -2.29 -5.17 -3.42 -6.57 0.5 -1.81 -3.06 -1.78 -0.99 -0.72 0.8 0.68 -0.13 -0.03
Smo85319 (PACid_15419169)
0.29 0.19 0.21 0.36 0.25 0.12 0.26 0.18 0.74 0.58 0.64 0.55 -3.28 -4.26 -3.13 -3.27 1.31 0.73 -1.46 -0.61 -1.38 -0.04 -2.21 -2.62 -0.71 0.12 -0.34 -0.27 0.15 0.15 0.84 0.87
Smo86219 (PACid_15421217)
0.34 0.24 0.3 0.21 0.17 0.19 0.22 0.18 0.27 0.34 0.37 0.25 -1.6 -0.57 -1.13 -1.22 0.32 -0.27 -0.93 0.04 -0.28 -1.43 0.65 0.31 -0.42 -0.84 0.05 0.35 0.43 0.49 -0.16 -0.23
Smo89101 (PACid_15406889)
-0.18 -0.62 -0.41 0.05 0.22 0.25 0.07 0.43 0.96 0.85 0.69 0.02 -1.92 -1.12 -0.79 -1.09 -0.07 -0.21 -0.84 -4.0 -1.85 0.08 0.99 0.56 -1.2 -1.72 0.2 0.12 0.6 0.8 0.02 0.41
Smo90062 (PACid_15409542)
0.09 0.39 0.43 0.49 0.91 0.46 0.39 0.25 0.73 0.39 0.3 0.08 -8.02 - -7.92 -6.44 1.81 1.3 -1.01 - -0.91 -5.66 -0.53 -2.26 -1.54 -1.27 -0.3 -0.56 0.71 0.42 0.66 0.14
Smo90332 (PACid_15411817)
1.22 1.15 0.68 0.33 0.18 0.42 -0.21 0.35 0.77 0.51 0.66 0.6 -3.22 -3.54 -3.38 -2.87 1.48 1.15 -2.37 -5.83 1.02 -3.78 -1.27 -3.12 -0.59 -4.15 -2.07 -1.62 0.7 0.23 -0.49 -0.54
Smo98264 (PACid_15412163)
0.46 0.53 0.47 0.41 0.49 0.56 0.32 0.26 -0.01 -0.18 -0.13 -0.19 -0.43 -0.2 -0.05 -0.11 0.18 -0.02 0.42 -2.84 -0.64 -3.05 0.0 -0.14 -0.66 -0.2 0.57 0.58 0.03 0.11 -0.85 -0.8

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.