Heatmap: Cluster_315 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo166204 (PACid_15414830)
-0.57 -0.3 -0.01 0.22 0.54 0.59 0.33 -0.2 -0.27 -0.32 -0.36 -0.53 -0.16 0.63 1.23 0.42 -0.08 -0.33 -0.37 -0.91 -0.97 -0.62 -0.65 -1.09 -0.68 -0.02 0.95 1.26 -0.49 -0.31 -0.8 -0.54
Smo98094 (PACid_15410732)
-0.53 -0.1 0.02 0.31 0.42 0.73 0.61 0.32 0.28 0.12 -0.12 -0.36 0.26 0.25 1.28 0.09 -0.42 -0.99 -0.6 -0.68 -1.91 -0.12 0.05 0.03 -2.85 -0.01 0.74 0.79 -0.79 -0.56 -1.07 -1.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.