Heatmap: Cluster_287 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo111174 (PACid_15408064)
0.66 0.56 0.58 0.61 0.79 0.63 0.08 0.31 0.37 0.14 0.39 0.27 -0.23 -0.64 -1.05 -0.19 -0.26 0.26 0.37 -1.81 -5.78 -4.69 -0.31 -0.36 0.67 -0.92 -0.93 -0.05 -0.08 0.31 -0.3 -0.42
Smo163389 (PACid_15406860)
0.29 0.07 -0.01 0.23 0.38 0.41 0.15 0.38 0.59 0.47 0.41 0.16 0.01 -0.45 -0.43 0.01 -0.56 0.28 0.16 -1.56 -2.2 -1.72 0.05 0.3 0.52 0.39 -0.32 -0.36 -0.36 -0.45 -0.28 -0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.