Heatmap: Cluster_252 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo125074 (PACid_15403864)
0.1 0.06 0.13 0.04 0.34 0.36 0.26 0.45 0.25 0.27 0.27 -0.02 -0.15 0.08 0.77 -0.12 -0.7 -1.88 -0.13 -0.83 -0.67 -1.71 -0.34 -0.22 0.09 0.36 0.48 0.27 -0.57 -0.56 -0.11 0.38
Smo152189 (PACid_15417624)
0.17 0.04 0.07 0.02 0.34 0.35 0.23 0.34 0.24 0.12 0.05 -0.14 0.07 0.03 0.76 0.05 -0.66 -1.14 -0.2 -0.28 -1.27 -2.17 -0.15 -0.09 0.26 0.39 0.4 0.09 -0.57 -0.57 -0.02 0.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.