Heatmap: Cluster_77 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00060380 (evm_27.TU.AmTr_v1.0_scaffold00001.37)
0.0 0.0 0.0 0.0 0.5 0.0 0.32 0.0 0.67 1.38 0.0 5.9 0.1 0.08 0.53 0.0 0.0 5.17 0.0 0.13 0.0 0.28
AMTR_s00002p00212240 (evm_27.TU.AmTr_v1.0_scaffold00002.220)
0.0 0.0 0.0 0.0 0.0 0.0 0.73 0.0 0.03 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0
AMTR_s00002p00212250 (evm_27.TU.AmTr_v1.0_scaffold00002.221)
0.0 0.0 0.0 0.0 0.0 0.0 0.23 0.0 0.03 0.05 0.0 0.0 0.0 0.02 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00002p00212360 (evm_27.TU.AmTr_v1.0_scaffold00002.222)
0.0 0.0 0.0 0.0 0.02 0.0 0.52 0.0 0.06 0.06 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.02
AMTR_s00002p00259450 (evm_27.TU.AmTr_v1.0_scaffold00002.435)
0.0 4.13 0.0 1.36 0.63 0.0 0.03 0.0 0.01 0.01 0.02 0.08 2.04 2.31 0.8 2.2 0.02 0.0 0.04 0.08 0.0 0.05
AMTR_s00003p00260840 (evm_27.TU.AmTr_v1.0_scaffold00003.341)
0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00005p00147860 (evm_27.TU.AmTr_v1.0_scaffold00005.46)
0.0 0.0 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00005p00183860 (evm_27.TU.AmTr_v1.0_scaffold00005.62)
0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.05
AMTR_s00005p00229360 (evm_27.TU.AmTr_v1.0_scaffold00005.107)
0.0 0.0 0.0 1.29 0.9 0.0 1.63 1.14 5.64 3.75 1.47 1.57 0.46 0.94 0.27 0.71 2.71 0.92 0.85 0.73 3.29 0.9
AMTR_s00007p00186970 (evm_27.TU.AmTr_v1.0_scaffold00007.153)
0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00007p00253260 (evm_27.TU.AmTr_v1.0_scaffold00007.292)
0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00008p00012240 (evm_27.TU.AmTr_v1.0_scaffold00008.1)
0.0 0.0 0.0 0.0 0.02 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.1 0.3 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.14
AMTR_s00015p00258130 (evm_27.TU.AmTr_v1.0_scaffold00015.117)
0.0 0.0 0.0 0.0 2.9 0.0 4.9 0.0 2.68 3.22 0.0 4.13 0.0 1.12 3.9 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00018p00245180 (evm_27.TU.AmTr_v1.0_scaffold00018.155)
8.99 13.21 20.32 4.28 2.75 0.0 1.14 0.56 0.7 0.84 8.46 17.3 26.84 10.55 10.52 4.47 8.73 35.32 10.17 5.02 0.89 5.05
AMTR_s00024p00243080 (evm_27.TU.AmTr_v1.0_scaffold00024.293)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.99 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00029p00170030 (evm_27.TU.AmTr_v1.0_scaffold00029.226)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00033p00227350 (evm_27.TU.AmTr_v1.0_scaffold00033.215)
0.0 0.0 0.0 0.0 0.15 0.0 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00034p00144680 (evm_27.TU.AmTr_v1.0_scaffold00034.43)
0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.05 0.08 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00034p00242270 (evm_27.TU.AmTr_v1.0_scaffold00034.135)
0.0 0.0 0.0 0.0 0.0 0.0 1.28 0.0 0.36 0.65 0.0 0.0 0.0 0.3 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00041p00237050 (evm_27.TU.AmTr_v1.0_scaffold00041.297)
0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.09 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00046p00061320 (evm_27.TU.AmTr_v1.0_scaffold00046.16)
0.0 0.0 0.0 0.0 0.24 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00048p00141400 (evm_27.TU.AmTr_v1.0_scaffold00048.90)
0.0 0.43 0.0 0.51 0.69 0.0 2.64 3.76 23.75 22.16 0.87 2.31 7.83 5.85 0.45 0.24 0.04 0.0 0.0 0.0 0.0 0.04
AMTR_s00050p00214960 (evm_27.TU.AmTr_v1.0_scaffold00050.81)
0.0 0.0 0.0 0.0 0.02 0.0 0.05 0.0 0.02 0.06 0.0 0.0 0.02 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00054p00161890 (evm_27.TU.AmTr_v1.0_scaffold00054.58)
0.0 0.0 0.0 0.0 0.14 0.0 1.03 0.0 0.49 0.46 0.0 0.0 0.0 0.22 0.41 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00055p00160410 (evm_27.TU.AmTr_v1.0_scaffold00055.78)
24.55 30.64 41.28 31.43 226.97 0.0 1.28 0.13 0.22 0.24 110.03 1518.06 13.88 29.11 37.47 0.52 0.19 0.0 0.64 0.05 0.0 0.0
AMTR_s00058p00202720 (evm_27.TU.AmTr_v1.0_scaffold00058.209)
4.01 0.02 0.0 0.0 0.42 5.75 4.85 1.48 3.74 4.4 0.0 2.37 0.06 0.57 0.3 0.09 0.0 0.12 0.0 0.0 0.0 0.02
AMTR_s00062p00141690 (evm_27.TU.AmTr_v1.0_scaffold00062.125)
0.0 0.0 0.0 0.0 0.03 0.0 0.03 0.0 0.12 0.05 0.0 0.0 0.07 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00062p00184220 (evm_27.TU.AmTr_v1.0_scaffold00062.181)
0.0 0.0 0.0 0.0 0.04 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00063p00174640 (evm_27.TU.AmTr_v1.0_scaffold00063.54)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00071p00014510 (evm_27.TU.AmTr_v1.0_scaffold00071.3)
2.65 7.08 0.0 0.0 1.46 0.0 0.2 0.0 0.0 0.0 0.0 10.9 1.1 0.13 0.39 0.0 0.46 0.0 0.0 0.0 0.0 0.17
AMTR_s00071p00014930 (evm_27.TU.AmTr_v1.0_scaffold00071.4)
0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.0 0.02 0.0 0.0 0.46 0.19 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00077p00047440 (evm_27.TU.AmTr_v1.0_scaffold00077.27)
0.0 0.0 0.0 0.0 0.35 0.0 0.01 0.0 0.0 0.0 0.89 1.12 2.74 7.64 0.36 0.0 0.0 0.0 0.0 0.0 0.0 2.62
AMTR_s00099p00033600 (evm_27.TU.AmTr_v1.0_scaffold00099.17)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00131p00090830 (evm_27.TU.AmTr_v1.0_scaffold00131.63)
0.0 0.0 0.0 0.0 5.53 0.0 1.73 0.46 3.2 4.13 0.0 18.17 0.13 0.35 1.17 0.0 0.0 0.0 0.15 0.0 0.0 0.0
AMTR_s00131p00091100 (evm_27.TU.AmTr_v1.0_scaffold00131.64)
0.0 0.0 0.0 5.15 5.32 0.0 1.39 0.0 3.22 3.51 0.7 12.23 0.42 2.48 3.14 1.65 1.18 1.07 0.0 2.76 0.0 1.39
AMTR_s00131p00091500 (evm_27.TU.AmTr_v1.0_scaffold00131.65)
0.0 0.0 0.0 2.26 0.98 0.0 0.4 0.0 0.66 0.64 0.53 4.86 0.95 3.52 1.22 0.34 0.55 0.59 0.45 3.19 1.32 1.74
AMTR_s00134p00069640 (evm_27.TU.AmTr_v1.0_scaffold00134.17)
0.0 0.0 2.76 0.02 2.33 4.34 0.17 0.15 6.91 5.27 1.75 6.24 4.74 4.81 1.96 0.93 1.6 0.64 0.6 0.63 0.74 5.58
AMTR_s00215p00017850 (evm_27.TU.AmTr_v1.0_scaffold00215.1)
0.0 0.0 0.0 0.0 0.04 0.0 0.03 0.0 0.01 0.0 1.17 2.02 0.78 1.78 0.05 0.0 0.08 0.32 0.07 0.01 0.0 0.02
AMTR_s00215p00018550 (evm_27.TU.AmTr_v1.0_scaffold00215.2)
0.0 0.0 0.0 0.05 0.0 0.0 0.03 0.0 0.01 0.0 0.41 0.35 0.73 1.55 0.05 0.0 0.17 0.61 0.16 0.0 0.0 0.03
AMTR_s00260p00014760 (evm_27.TU.AmTr_v1.0_scaffold00260.1)
12.67 44.52 1.71 0.0 8.89 0.0 0.31 0.06 0.0 0.06 4.11 27.1 10.75 0.48 1.43 0.0 0.0 1.61 0.0 0.0 0.0 0.2
AMTR_s00260p00015480 (evm_27.TU.AmTr_v1.0_scaffold00260.2)
7.09 11.8 0.0 0.0 1.05 0.0 0.03 0.0 0.0 0.0 0.1 4.2 0.39 0.12 0.19 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00352p00011630 (evm_27.TU.AmTr_v1.0_scaffold00352.1)
1.3 2.2 0.0 0.07 0.58 0.0 0.01 0.0 0.0 0.0 0.0 2.66 0.64 0.18 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.07
AMTR_s00475p00008300 (evm_27.TU.AmTr_v1.0_scaffold00475.1)
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s01058p00005000 (evm_27.TU.AmTr_v1.0_scaffold01058.1)
8.84 0.0 3.83 0.0 5.47 5.28 9.24 23.85 29.43 30.36 0.86 5.93 0.55 1.57 1.17 0.0 0.06 0.0 0.0 0.03 0.05 0.01
AMTR_s01072p00000950 (evm_27.TU.AmTr_v1.0_scaffold01072.1)
0.0 0.0 0.0 0.0 0.05 0.0 0.08 0.0 0.0 0.0 1.25 1.27 1.11 3.3 0.03 0.0 0.1 0.74 0.0 0.04 0.0 0.0
AMTR_s01234p00005010 (evm_27.TU.AmTr_v1.0_scaffold01234.1)
0.06 0.0 1.88 0.0 0.06 0.0 0.01 0.0 0.04 0.01 0.41 7.9 0.53 0.14 0.0 0.09 0.0 0.0 0.0 0.0 0.05 0.0
AMTR_s02052p00000390 (evm_27.TU.AmTr_v1.0_scaffold02052.1)
0.0 0.0 0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.0 0.83 2.57 0.0 4.44 0.3 0.11 0.0 1.21 0.0 0.0 0.0 0.0
AMTR_s02064p00009480 (evm_27.TU.AmTr_v1.0_scaffold02064.1)
40.81 19.78 17.25 0.0 27.74 0.0 48.15 36.05 109.74 96.78 4.06 55.81 7.22 8.12 4.83 0.0 1.18 0.0 0.0 0.12 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)