Heatmap: Cluster_331 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo438741 (PACid_15423330)
-0.17 0.03 0.03 0.15 0.03 0.23 0.38 0.73 0.61 0.55 0.45 0.42 -1.05 -1.18 -1.08 -0.83 -0.67 -0.71 0.29 -0.22 -0.21 -0.07 -0.24 -0.04 -0.35 0.62 0.44 0.37 -0.01 0.05 -0.66 -0.82
Smo74832 (PACid_15412906)
0.04 0.16 0.07 0.08 0.13 0.15 0.2 0.31 0.3 0.34 0.3 0.19 -0.45 -0.62 -0.38 -0.03 -0.39 -1.11 0.12 -0.46 0.07 -0.5 -0.39 -0.46 0.08 0.39 0.52 0.59 -0.07 0.05 -0.27 -0.41

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.