Heatmap: Cluster_243 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo145994 (PACid_15402926)
-0.53 -1.12 -1.38 -1.08 -0.89 -0.93 -0.01 -1.08 -0.81 0.45 1.32 2.04 -2.23 1.2 0.34 -0.41 -1.23 -0.47 1.35 -3.99 -1.65 -2.11 -1.5 -1.93 -2.75 -1.73 -0.22 -1.27 0.63 1.73 0.29 0.73
Smo48560 (PACid_15422975)
0.06 -0.6 -0.58 -0.76 -0.85 -0.7 -0.09 -0.74 -0.21 0.48 0.91 1.36 -0.97 -0.32 -0.21 0.1 0.24 0.13 0.03 -0.01 0.33 -1.74 -0.26 0.45 0.57 -0.74 -0.19 0.18 0.29 0.52 -0.12 -0.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.