Heatmap: Cluster_88 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-3.77 0.94 -2.22 -3.01 -2.3 5.36 - -0.2 -1.53 - -2.36 - - - - - -3.68 -2.37 - - -3.49 -1.69 - -2.9 - - - -0.87 - - -1.14 -0.56 - - - - -0.95 - - -2.24 - - - - - -0.15 - - -
-1.93 1.28 -3.22 - -2.98 4.34 -1.66 -4.28 -2.27 - -0.68 0.21 -1.4 0.77 3.81 1.41 -3.82 -3.11 - -2.6 -5.76 -5.59 - - - -2.16 - - - - - - - - - -2.05 - - - -2.54 -3.15 -3.36 -3.47 0.03 0.26 0.21 - - -
-1.84 1.44 -0.71 -2.61 -2.88 4.36 -2.47 - - -3.34 -0.83 -0.05 0.32 2.31 - 1.93 - -3.43 - -1.47 - - -3.15 -4.22 - -0.47 - - - - - - - - - - - 0.27 - - - -3.61 -3.12 2.64 0.49 -0.97 0.83 - -
-3.73 2.32 - - - 4.98 -0.74 -3.06 -1.65 - -1.57 -0.45 - - - - - - - -1.21 - - - - - 0.06 - - - - - - - - - - - - - - - - - -0.43 2.23 1.79 - - -
-1.47 0.71 -1.15 -1.06 -2.21 5.39 -2.82 - -1.55 - -2.99 - - - - - - - - -5.55 - - - - 1.68 - - - - - - - - - - - - - - - - - - - - - - - -
-1.29 -0.55 -3.24 1.06 -0.06 3.91 0.16 0.1 -2.15 -1.07 -0.89 -3.9 -1.99 -1.85 0.46 0.78 -0.71 -1.24 -1.84 0.25 -6.5 -5.49 -6.41 -5.69 -1.11 0.02 -0.6 - -7.77 -6.59 -6.27 -4.82 -7.47 - -5.96 -6.7 -7.8 -6.94 -5.5 -5.96 -4.58 -4.84 -4.29 4.02 -1.55 -1.9 -2.01 -1.81 -1.98
-0.27 0.95 1.97 0.86 -0.84 4.98 -0.66 -0.76 -0.77 0.21 0.57 -4.88 -2.01 -2.0 -2.15 - 0.62 -1.31 - -3.32 -5.85 -5.51 -6.17 -6.9 - -3.4 - - - - -3.23 -3.13 - - - -3.33 -3.39 -3.54 - -7.03 - - - -3.83 -2.94 -4.38 - -3.79 -3.12
-3.09 0.81 -4.9 -1.93 -2.6 5.16 -1.75 -2.62 -1.83 -2.72 -0.45 -2.84 -3.32 -2.81 - - -3.09 -2.99 0.86 -1.48 - - - -4.33 -0.8 - - - - - - - - - - - - - - - - - - 1.12 0.21 -1.2 0.79 -1.38 -
-5.01 2.28 1.7 -2.29 -3.71 5.18 -4.28 -3.28 -1.71 -4.49 -1.75 - - - - - - -6.87 - -4.28 - - - - - - - - - - - - - - - - - -1.33 - -4.99 - - - -5.01 -1.74 - 1.0 -0.74 -
1.56 1.42 0.31 -3.9 -4.06 4.9 -0.22 -0.38 1.15 -2.11 -0.4 -3.67 -2.38 -0.73 - - -0.11 -2.13 -0.29 -1.41 -5.69 -4.65 - -6.37 - -2.36 -0.98 - - - - - - - - - - - - -5.37 - - -5.86 -1.04 -0.68 -1.92 -0.03 -1.16 -1.22
-5.14 -2.43 -6.19 2.01 -0.83 5.45 -2.82 -3.11 -7.49 -7.14 -6.83 -7.31 - - - - -5.61 -8.85 - -8.99 -8.58 -8.71 - - -3.45 - - - - - - -5.2 - - - - - - - - -9.48 -7.46 -6.64 -6.11 - -6.32 -5.97 - -
-0.7 1.32 2.63 1.33 -0.47 4.86 0.52 0.95 -1.59 -2.14 -0.76 -3.61 -3.34 -2.08 - - -0.91 -4.7 - -3.0 - - -4.6 - - -2.15 -2.16 -1.78 - - - -3.92 - - - - - - - -4.58 - - - -3.71 -2.31 -2.64 - - -1.4
-0.83 -1.25 -1.92 1.52 -0.31 5.31 -1.25 -0.82 -0.39 -2.74 -0.73 -5.43 -2.39 -2.52 -2.82 - -3.48 -1.85 - -2.55 -5.33 -6.72 -5.8 -8.28 - - - - - - - - - - -2.9 - - - - -7.72 -6.9 -6.15 - -1.79 -2.63 -4.62 -4.27 -4.46 -4.37
-2.82 1.16 - -2.48 0.24 5.47 - - - - -3.75 - - -2.13 - - - - - - - -4.53 - -2.34 - - - - - - - -2.03 - - - - - - - - - - - - - - - - -
-0.91 1.34 -3.48 -1.62 0.43 4.84 -3.33 -2.74 -1.19 -4.57 -1.09 0.78 -1.27 0.99 - - -3.92 -1.04 - -3.35 -2.53 -1.63 -1.86 -1.07 - - - - - 0.46 -0.39 -3.03 - - -1.04 -1.14 -0.1 1.41 - -3.54 -3.89 -3.47 -2.26 -2.98 - - - 0.0 -
-3.17 0.34 1.6 -0.54 -1.5 5.39 -3.74 -3.92 0.18 -2.76 -4.63 - - - - - -6.94 - - -6.83 - - - - - - - - - - - -5.43 - - - - - - - - - - - - - - - - -
0.42 2.53 -0.92 - - 4.97 - - 0.92 - -1.55 1.87 - - - - - -3.79 - - -3.25 - - -0.39 - - - - - - - 1.64 - - - - - - - -2.96 - - - - - - - - -
-0.56 0.43 - -0.18 0.65 5.27 -3.73 -3.3 0.53 -6.55 -4.33 - -0.71 -0.04 - -1.95 -4.11 -2.84 - -0.68 -6.14 -4.19 -6.91 - - -0.06 -1.28 - - - - - - - - - - -2.57 - -4.62 - - - -4.78 - - - - -
0.04 1.57 - 0.56 - 4.86 - 1.23 - - -2.0 1.2 - 0.76 - - -0.07 -1.03 - -4.2 - 0.36 -2.07 1.11 - - - - - - - - - - - - - - - -1.84 -0.5 -0.86 -1.01 -0.48 - - - - -
-2.15 -1.37 - -1.16 -1.77 5.51 -4.49 -4.81 0.05 - -2.97 - - - - - -6.86 -7.25 -0.75 - -6.48 - - -6.82 - -3.69 - - - - - - - - - - - - - - -6.37 - -6.24 - - - - - -
-2.55 -0.14 - -3.04 - 4.95 2.06 1.49 -2.91 -1.54 0.69 -1.3 -2.06 -0.05 - - -3.55 -0.43 - -0.95 -2.24 -2.02 -1.95 0.13 -1.13 - -2.46 - -1.74 - -3.59 -2.65 -2.17 - -2.11 -2.32 - -2.55 -1.41 -7.07 -3.84 -5.17 -5.79 -1.05 -3.75 - - - -
-2.76 0.32 -4.91 0.75 -0.39 5.46 -3.9 -3.64 -1.08 - -7.42 - - - - - -6.49 -5.1 - - -7.27 -6.42 - -5.23 - - - - - - - - - - - - - - - - - - - -2.11 - -4.07 - - -
1.0 1.8 -0.06 -4.7 -3.33 2.53 -0.77 -0.55 0.09 -2.19 -1.57 0.86 0.58 0.03 -0.18 -0.91 0.36 0.26 0.0 -0.72 -1.24 -0.84 -1.68 -0.51 -2.09 0.93 0.41 -0.73 -1.43 -1.51 -1.01 -1.07 -1.83 -2.2 -1.43 -1.4 -0.66 -1.52 -1.2 -1.28 -0.35 -0.54 0.18 3.15 -0.34 -0.86 -2.09 -4.54 -
-0.39 1.5 1.9 0.05 -0.06 3.85 -0.75 -0.67 - -1.66 -2.0 - - 0.2 - 0.61 -1.31 -1.42 - -4.37 -1.92 -4.19 -4.15 -2.61 - -0.62 0.33 - - - - -2.44 - - - - - - - -2.6 -2.24 - -3.31 -3.78 - - 2.04 3.29 1.54
-4.65 3.16 - -1.74 0.47 4.55 - - -1.45 - -2.3 - - -0.73 - - -1.27 - - -0.52 - - - - - 0.0 - - - - - - - - - - - - - - - - - 3.23 - 0.06 0.23 - -
-4.32 -1.31 -3.19 -2.11 -0.71 5.53 - -1.9 - -5.21 -5.51 -0.73 - - - - -4.56 - - -5.77 -5.71 -5.51 - -4.98 - - - -1.75 - - - - - - - - - - - - - - - -4.32 - - - - -
-4.07 0.08 -6.53 -0.98 -1.38 5.4 -2.87 -2.95 1.71 -5.0 -4.55 -4.99 - - -1.62 - -3.59 -9.17 - -9.74 -5.52 -6.78 - - - - - - - -3.38 -4.29 -6.28 - -3.85 - - - - - -8.06 -6.88 - - -5.37 -4.99 -4.44 -2.65 -3.2 -
-3.9 0.19 0.95 2.03 0.72 4.4 2.48 2.07 0.89 0.05 -0.32 -1.02 - - - -1.99 -3.74 -1.97 -0.31 -2.96 -4.54 -4.88 -4.93 -4.34 -0.88 -1.12 0.37 - -1.59 - - -3.08 -2.11 - - - - - - - -4.22 - -5.84 -4.56 - -1.49 - - -
-4.17 -1.66 - -4.96 -0.74 3.88 -5.93 -3.4 -1.35 -4.36 -4.14 0.09 -6.15 -3.35 -4.18 - -3.65 -3.5 -2.45 -3.17 -6.21 -5.16 -4.55 -5.52 - -5.58 -4.49 -5.07 - -4.18 - -5.63 -4.15 -3.83 -5.22 - - - -5.48 -4.48 -5.03 -5.29 -3.62 4.48 1.81 0.93 1.13 -1.47 -4.1
-1.61 1.26 - - - 4.38 - - -3.54 - - - - - - - - -6.09 - -3.79 -5.75 -5.0 - -3.81 - - - - - - - -1.18 - - - - - - - - - - - 4.51 -0.86 -0.24 -1.05 - -
-1.38 3.39 - 0.05 - 4.73 0.81 -2.12 -1.01 -0.67 -0.8 - -0.86 -0.96 - - 0.83 - - -2.59 - - - - - - - - - - - -0.03 - - - - - - - - -3.69 - - -0.86 - 1.13 - - -
1.04 -0.09 2.05 1.08 -4.03 4.73 0.87 0.91 1.05 -2.3 -0.04 -4.63 -5.95 -1.55 - - 1.74 -6.48 0.23 -5.88 -7.96 - -8.08 -6.85 - -4.91 - - - - - -4.95 - - - -3.61 - - - - -8.1 -7.13 -7.29 -5.7 - - -2.21 -3.09 -0.32
-0.41 0.78 - - - 5.49 - - -0.47 - -6.61 -1.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.14 - - -
-1.88 2.44 -2.35 1.65 0.71 4.81 -2.15 - 0.6 - -7.46 -0.84 - - - - -2.52 -3.68 - -3.52 - - - -2.15 - - - - - - - -0.26 - - - - - - - - - - - 2.53 -1.23 -1.57 - - -
-0.68 2.36 -0.73 -0.53 -2.84 5.22 -3.64 -3.95 -2.18 -6.2 -0.92 - - -2.02 - - -4.07 -2.04 0.11 -3.02 - - -3.19 -4.96 -1.45 - - - - - - -4.65 - - - - - - - - -6.66 - -5.38 -4.82 - -2.42 -0.04 -3.37 -3.13
1.99 3.41 - -2.04 - 4.67 -2.12 -0.22 -1.7 - -0.49 - - 0.68 - - -0.98 -5.69 - -6.89 -3.95 - - -2.22 - - - - - - - -0.23 - - 0.44 - - - - - - -0.75 -1.34 -1.8 - - - -0.38 -
-1.61 1.98 0.08 - - 5.07 - 2.1 - - -0.24 - -0.94 0.86 - - - -0.85 - -4.67 - -3.23 - -1.71 - -1.31 - - - - - -0.75 - - - - - - - - - - - - -10.36 -0.73 - - -
0.49 -1.17 0.87 -0.85 -1.65 4.87 0.12 0.77 -1.05 -1.59 0.79 - 0.62 1.04 - - 0.52 0.62 -0.04 -3.43 - - -6.42 -6.76 -1.61 - - - - - - - - - - - - - - - - - - -6.18 - - -0.82 -0.08 -1.7
-0.68 3.35 - -0.21 0.65 4.75 - - -0.92 - -3.83 -0.59 - - - - - - - -0.3 -1.17 - - -2.18 - - 0.8 - - 1.27 - 0.7 - - - - - - - - - -1.9 - - - - - - -
-3.69 -2.66 -2.09 0.63 -1.41 5.4 -1.02 -0.54 -4.15 -0.59 -1.41 -2.94 -3.54 -5.88 -5.65 - -5.77 -4.19 -3.96 -5.9 -5.71 -7.52 -6.06 -6.94 -3.6 -7.1 -5.95 -5.15 -5.24 - -6.73 -4.08 - -6.4 - -6.84 -6.69 -5.62 -5.99 -6.89 -7.15 -7.02 -6.85 -0.34 -2.32 -2.93 -2.83 -3.31 -4.62
-3.9 0.63 -0.4 - - 5.37 - - -0.87 - -7.27 -0.7 - - - - -3.6 -2.35 - 0.91 - - - - - -0.55 -0.04 - - - - -3.77 - - - - - - - - -5.21 - - - - - -2.15 - -
1.61 0.94 -1.27 -2.39 -2.82 2.62 -0.46 -0.95 0.14 -1.06 -0.7 -0.62 -0.58 -0.05 -0.38 -0.23 1.18 -0.68 0.25 -0.13 -1.94 -1.36 -1.85 -2.55 1.17 -0.92 -0.87 -1.45 -1.72 -2.22 -2.42 -1.12 -2.28 -4.67 -2.62 -2.66 -2.82 -2.38 -2.0 -2.07 -1.49 -1.49 -1.42 3.33 0.6 0.34 -0.14 0.01 0.67
-1.72 -0.11 0.93 -4.95 0.74 3.61 -1.8 -2.77 -0.84 -4.17 -1.41 -5.44 -3.76 -2.37 -3.38 -2.34 0.45 -1.68 -0.33 0.33 -5.95 -4.6 -6.68 -5.13 -4.21 -1.33 -3.66 - - -5.51 - -7.41 - - - -5.53 - -4.98 - -7.55 -7.95 -5.99 -5.74 4.35 -1.29 -0.65 1.96 -4.89 -3.72
-4.61 -0.34 0.65 1.92 3.3 4.67 -1.02 -1.18 -1.19 - -4.97 -1.31 -3.97 -4.87 - - -2.69 -3.72 - -3.31 -3.22 -3.85 -4.38 -4.88 - -1.43 -3.23 -2.82 - -3.07 - -1.37 -3.01 - -3.72 -3.06 -3.03 -2.86 - -3.77 -2.76 -5.05 -3.01 -3.97 0.59 0.18 -2.7 -3.05 -
-4.71 1.99 - - - 5.23 - - - - - - - - 1.27 - - 1.68 - -1.78 -3.49 - - -0.24 - - - - - - - - - - - - - - - - - - - -0.82 - - - - -
-0.96 1.43 -0.09 -0.73 0.62 5.03 -0.45 -0.77 -0.57 -2.27 -2.46 -1.58 - -2.1 - 0.13 -5.45 -3.01 - -0.69 -4.35 -4.27 -5.38 -3.41 - -0.63 0.6 - - - - -2.36 - - - -2.01 -2.11 - - - -2.79 -3.06 -3.53 -3.75 0.71 -2.66 - - -
-3.8 1.59 - - -0.16 5.21 - - - - -2.09 - 0.45 1.49 - - - - - -0.68 -0.73 -3.58 -3.49 -4.66 - - - 0.01 - - - -0.82 -0.94 - - - - - - - - - - -4.24 - - - - -
-6.58 0.57 - -3.32 -1.68 5.53 -4.98 - - - -7.56 - - -1.41 - - - - - -4.77 - - - - - - - - - - - - - - - - - - - - -4.64 - - -5.05 -1.97 - - - -
-4.0 -0.26 - 1.23 - 4.31 -2.19 -4.66 -4.77 -4.9 -7.37 - -3.94 - - - -4.89 -5.8 - -3.15 -5.34 -5.46 -6.59 -5.01 - -2.39 - - - - - -4.95 - - - - - -1.51 -3.21 -5.66 -5.69 - -4.13 4.58 -1.41 -2.71 - - -
1.27 0.46 -0.87 -2.28 -6.64 2.41 0.49 0.34 -0.33 -2.38 -1.07 0.88 0.22 0.85 -0.88 -0.05 1.07 -1.4 0.23 0.09 -2.14 -2.29 -2.24 -2.59 1.35 -1.58 -0.79 -1.77 -2.77 -1.67 -2.19 -1.46 -3.44 -4.69 -1.87 -2.04 -3.64 -1.49 -2.83 -2.91 -2.37 -2.6 -2.11 3.44 0.43 -0.13 -0.01 0.09 0.29
-3.68 -0.77 -3.04 - -2.4 4.2 - - -1.21 -5.53 -3.47 -0.86 - 2.05 - - - -4.4 0.3 -4.3 -1.16 -4.22 - -1.82 3.7 -1.73 - -1.19 -1.4 -0.06 -0.88 0.66 - -2.14 -2.43 - -1.43 -2.78 -0.23 -6.09 -6.48 - - - 1.48 -1.03 - - -
-4.09 -0.53 0.98 - -2.78 5.48 - - -1.97 - -6.18 - -3.77 -1.58 - - -3.7 -3.76 - - -4.97 -6.93 - -5.68 - - - - - - - -1.92 - - - - - - - - -6.33 -5.49 -4.1 - -2.16 - - - -
-2.42 1.84 -2.3 - - 5.37 - - - - -2.43 - - - - - -1.99 - - - -1.51 - - -1.15 - - - - - - - - 0.11 - - - - - - - -1.35 -2.7 -2.61 - - -0.36 - - -
0.21 1.5 -1.21 -4.15 - 4.42 0.9 0.1 0.02 -0.49 0.39 - -0.33 -0.3 - - 1.07 -0.35 0.72 -1.45 - - - - -0.84 - 0.29 - - - - - - - - - - - - - - - - 0.44 0.88 -0.49 -0.13 0.14 1.57
- -0.06 - - - 4.99 -0.3 0.51 -2.28 - -1.79 - - -0.96 0.76 - -2.16 - - -1.46 - - -3.07 -3.58 0.88 - - - - - - - - - -0.33 - - - -0.58 - -4.34 - - -4.3 - 2.83 - - -
-3.52 1.02 -0.97 - - 4.76 - - -0.57 - - 2.72 - - - - - -3.99 - -1.84 - 1.05 -2.29 -0.5 - 1.3 - - - - - -1.98 - - - - - - - -2.3 -0.68 -1.05 0.26 -2.62 0.83 0.65 - - -
-0.4 3.57 - - - 4.95 - - - - -2.77 -1.52 - 1.63 - - -3.18 - - -5.88 -4.18 - - -3.68 - - - - - - - - - - - - - - - - - -2.66 - - - - 0.62 - -
- 2.37 - - - 5.45 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-4.17 0.45 - -2.22 1.83 5.11 -3.09 - - - -1.04 - - - -0.75 - - - - -0.24 - - - - - 1.58 2.06 - - - - -3.78 - - - - - - - - - - - - - - - - -
0.56 - -0.45 -0.36 -0.5 4.93 - - 1.18 - -3.08 - - -0.05 - - -2.65 - - -1.77 -1.07 -3.2 -0.42 - -23.73 - - 0.61 - - - - 0.82 - - - - 2.12 - - -4.11 - -0.56 -2.52 -0.49 -0.93 - - -
-1.11 0.87 -1.08 -2.14 3.66 4.95 -2.08 -0.12 -0.61 - - - - - - - - -1.04 - -3.98 - - - - - - - - - - - - - - - - - - - - -4.51 - - - - - - - -
-0.36 0.89 -2.36 -1.89 -1.42 3.22 -4.78 -2.34 2.13 -5.1 -3.34 -3.56 1.64 0.83 -1.24 -0.05 -2.35 -0.48 - -3.29 -3.16 -4.79 -3.13 -3.66 - -3.62 -2.93 -3.25 -4.43 -3.39 -4.29 -2.64 - - -1.54 -4.4 - -3.02 - -4.26 -3.48 -3.66 -2.21 4.45 -4.68 -2.41 - - -4.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.