Heatmap: Cluster_307 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo111378 (PACid_15409687)
-0.1 - -0.71 -1.12 - - -0.04 -1.43 -0.61 1.54 0.59 0.58 -1.45 0.49 1.73 0.44 - -2.59 2.53 - - - -0.99 2.05 - 0.64 0.26 -0.38 - -0.19 -1.62 -1.68
Smo122097 (PACid_15417606)
-2.74 0.56 -1.43 -2.11 1.74 -0.38 - -0.3 0.83 0.75 0.2 -0.28 - 0.12 1.16 -0.21 -1.0 -2.0 2.35 - - - -0.64 2.57 - 0.31 - - - 0.11 -2.03 -2.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.