Heatmap: Cluster_123 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-3.05 -0.38 - 3.96 4.76 0.64 -0.05 0.92 -3.03 - -7.6 - - - - -1.23 -5.65 - - -3.66 -6.64 -5.74 - - - -2.73 - - - - - - - - - - - - - -5.77 - - -5.3 -3.84 - - - - -
-6.6 0.48 - 3.67 4.73 -2.04 1.23 1.45 - -5.59 -7.04 - 0.13 0.78 - - - -6.34 - -5.07 - - -6.3 -5.33 - - - - - - - -4.63 - - - - - - - - - - - -5.04 - - - - -
-5.41 0.51 -3.66 2.46 4.87 -1.84 2.47 2.54 - -3.96 -1.62 - - -2.88 - - - - - -7.44 - - - - - - - - - - - - - - - - - - - - - - - -4.59 - -0.83 - - -
-5.51 -4.73 -2.89 4.27 4.43 0.84 0.44 0.7 -5.88 -4.95 -3.15 -7.26 -3.09 -2.54 -3.94 -3.12 -5.95 -3.49 -4.5 -2.27 -5.31 -4.58 -5.04 -5.01 -2.43 -1.77 -3.22 -5.18 -4.81 -4.77 -5.13 -5.15 -5.17 -6.02 -5.19 -4.77 -4.46 -5.43 -5.31 -5.15 -5.63 -5.44 -6.22 -3.19 -4.06 -4.16 -0.43 -4.04 -7.06
1.23 1.57 -1.1 3.49 3.98 -0.77 0.97 0.92 0.12 -3.34 0.14 -5.91 -0.57 -0.33 -2.26 -2.03 0.29 -0.21 -0.81 -2.36 -7.09 -6.57 -6.35 -6.59 -1.95 -2.21 -2.62 -5.56 -6.89 -5.72 -6.07 -6.07 -6.85 -7.58 -7.13 -5.9 -6.27 -6.1 -6.42 -7.86 -7.58 -7.53 -7.65 -1.14 -0.25 -0.44 0.24 -0.7 -3.81
0.21 -0.01 -1.53 2.04 3.25 -0.35 1.27 1.04 -0.06 -0.87 -0.52 0.49 0.19 0.03 0.05 0.15 0.33 -0.76 -0.39 -0.08 -2.06 -2.36 -2.2 -2.24 -0.26 -0.04 -0.33 -1.7 -2.69 -2.02 -2.43 -1.44 -2.1 -1.24 -2.01 -1.84 -2.18 -2.52 -2.06 -2.46 -1.92 -1.84 -1.34 0.03 0.66 0.18 1.15 0.51 0.1
- 0.09 - 3.04 5.03 - 0.85 1.3 -1.76 - -6.8 - - 0.84 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.63 - -
-6.59 - -4.4 4.03 4.97 -0.91 -2.3 -2.26 - -6.22 -3.72 - - -4.01 - - - -8.0 - -11.34 - - -4.05 -7.74 - - -3.52 - - - - - - - - - - - - - - - - - - - - - -
-4.42 -0.01 - 3.65 4.55 -1.72 1.9 2.97 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -4.36 - - - - -
-0.94 0.47 -4.59 1.74 4.96 1.62 -0.82 -0.96 -4.09 -2.29 -0.23 -5.93 -4.79 1.42 - -2.65 -0.41 -2.56 - -2.4 -4.15 -3.65 -4.1 -3.53 - -0.91 -2.36 -3.56 - -3.54 - -1.57 - - - - - - - -2.75 -2.93 -3.66 -2.38 -3.1 -1.83 -1.59 -3.25 -3.35 -2.01
0.89 1.35 1.08 3.82 3.91 -0.1 -0.16 -0.02 0.05 -2.62 0.04 -6.46 -2.46 -1.7 -0.7 -1.05 0.07 -0.72 -1.16 -0.71 -4.57 -4.87 -4.38 -4.49 - 0.16 -0.47 - -3.44 -2.96 -2.42 -6.92 - - - -3.02 -3.89 -4.49 -5.19 -4.14 -3.81 -3.43 -4.08 -1.48 -2.35 -2.1 - -3.61 -3.82
-2.28 0.61 -4.26 4.33 3.5 - 2.66 2.55 - -4.59 -4.03 - - - - 0.03 -1.1 -3.9 0.13 -2.84 - - -5.32 - - - - - - - - - - - - - - - - - - - - -7.01 -1.01 -2.16 - - -
0.75 1.63 -1.14 3.58 2.59 -1.86 1.07 1.35 -1.14 -1.91 -0.0 -4.51 0.17 0.64 -1.01 -0.81 -0.24 0.14 -1.34 -0.27 -3.5 -3.19 -3.48 -3.19 0.48 -0.66 -1.01 -2.14 -2.78 -3.96 -3.16 -3.68 -4.68 -4.63 -3.71 -3.85 -2.72 -3.17 -3.81 -3.38 -3.22 -2.84 -2.99 0.27 0.42 0.34 1.66 -1.17 -2.72
-2.02 1.29 -2.77 4.01 3.19 0.77 3.04 2.99 -3.15 -3.83 -2.42 -4.3 -1.38 -0.25 - - -1.89 -5.3 - -3.07 -6.32 - - - - - -2.7 - - - - -4.46 - - - - - - - - -6.67 - - -2.95 -3.75 -1.92 -2.65 - -2.61
-3.65 -2.32 -1.98 4.15 4.06 -1.01 1.36 1.72 -4.75 -5.22 -5.07 -5.04 -3.85 -4.75 - -1.76 -5.98 -5.67 - -0.71 -2.32 -3.19 -3.55 -3.04 0.13 -1.99 -2.08 -1.7 -3.36 -3.27 -2.56 -1.67 -1.83 -2.44 -2.14 -0.7 -1.24 -1.35 -1.9 -3.28 -3.28 -3.69 -5.65 -1.39 -4.18 -4.57 -2.72 -2.85 -
-6.61 -5.49 -7.43 4.38 4.56 0.75 0.32 0.49 -10.52 -8.37 -8.71 -7.62 -7.99 -6.61 -6.45 -6.84 -10.21 -6.79 - -5.19 -8.51 -8.57 -8.5 -8.83 -6.38 -5.44 -5.67 -9.36 -7.43 -8.47 -7.87 -7.98 -8.54 - -9.26 -7.58 - -9.82 -8.38 -8.46 -8.11 -8.75 -7.72 -7.13 - -10.23 - - -
-1.39 0.57 -5.68 4.43 3.4 -2.67 1.98 2.4 -2.41 -1.49 -1.75 -3.66 -4.71 -3.38 -4.63 -2.63 -2.33 -1.32 - -2.26 -4.99 -4.31 -5.51 -5.31 -3.6 -3.25 -4.35 -5.79 -5.22 -5.55 -6.07 -4.46 - -5.27 -4.46 -5.78 -4.68 -3.08 -4.39 -5.78 -4.51 -6.02 -4.87 -0.24 0.13 -1.35 -2.86 -4.23 -3.48
-3.25 -0.98 -5.96 3.92 3.92 -2.33 1.09 1.29 -4.48 0.22 0.41 -2.87 -2.41 -2.42 -0.58 -0.35 -4.56 -3.06 -3.28 -2.4 -3.87 -2.95 -3.15 -3.0 0.3 0.42 -2.69 -2.78 -2.71 -0.01 -0.97 -2.26 -3.63 -1.84 -3.56 -3.32 -3.89 -4.98 -5.02 -4.58 -3.42 -4.33 -3.78 -4.16 -2.43 -2.13 -0.33 -0.57 -1.59
-2.22 1.41 -5.8 3.76 2.73 -0.03 1.41 1.46 -0.23 -4.81 -0.12 -2.28 -0.88 0.45 -3.71 -3.68 -0.09 -1.31 -3.98 -2.41 -4.62 -4.56 -4.22 -5.04 -1.25 -5.03 -5.0 -5.25 -4.89 -4.26 -4.19 -3.42 -4.34 -5.31 -2.87 -3.37 -3.53 -4.64 -4.37 -5.11 -5.32 -3.26 -3.34 -0.43 1.65 1.92 1.03 0.99 -1.03
1.36 -2.64 -3.97 1.12 5.14 2.48 -2.99 -3.34 -4.83 - -5.11 -6.26 -5.54 - -3.52 -1.16 - -3.29 -0.2 -3.68 -6.86 - -6.79 -5.36 - -3.9 -3.23 - -1.69 - - - - - - -4.62 - -4.86 - -7.45 -8.25 -6.12 -5.29 - -2.27 -0.93 - - -
-1.69 -1.45 -3.74 4.36 4.4 0.19 -0.05 0.15 -2.07 -3.99 -3.63 - -2.93 -3.39 - - -1.04 -3.73 -1.55 -2.94 -6.99 -6.25 -6.77 -6.91 -1.03 -4.12 -4.56 -3.66 -5.45 -5.16 - - - - -4.32 - -3.76 - -4.19 -5.21 -5.82 -6.8 -4.99 -3.37 -3.67 -5.28 -1.84 -3.28 -2.62
-3.01 -0.3 - 2.59 5.24 - -0.43 0.5 0.32 - -7.19 - - -0.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-3.45 -2.59 -1.77 3.85 4.73 1.79 -2.06 -2.12 - - -4.93 -3.44 - - - - - -3.4 - -1.37 - - - -6.8 - 0.44 0.64 - - - - - - - - - - - - - - - - - - - - - -
-1.59 -1.01 -4.58 4.26 4.33 0.57 -0.0 0.22 -2.92 -2.6 -1.99 -6.88 -3.21 -2.97 -2.12 -3.12 -2.57 -3.56 - -2.19 -5.63 -3.87 -4.18 -5.3 -0.86 -3.58 -2.42 -3.03 -3.31 -5.02 -5.18 -4.31 - -4.85 - - - - - -4.36 -4.29 -5.51 -4.5 -1.95 -2.11 -4.88 -0.86 -0.35 -2.48
-2.14 0.07 -3.52 -0.74 5.38 - -3.5 -5.49 - -3.24 -1.54 -3.88 -4.61 -0.13 - - -2.37 -2.35 - -1.08 -5.13 -7.08 -3.63 -6.5 0.31 -3.68 - - -3.33 - -3.55 -4.19 - - - - - - - -3.54 -2.6 -2.22 -2.2 -2.61 -3.52 -2.86 -3.57 -3.76 -
- -0.5 - -1.71 5.45 - - 0.8 - - - - 0.52 0.05 - - - - - - - - -3.32 - - - - - - - - - - - - - - - - - - - - - - - - - -
-5.07 -6.07 -9.03 1.25 5.52 -2.58 -1.93 -1.72 -9.13 - -10.93 - - - - - - -8.55 - -15.34 - -11.8 - - - -8.49 - - - - - - - - - - - - - - - - - -11.6 -8.97 -7.76 - - -
-3.98 -0.04 - 4.2 4.28 0.57 1.7 2.05 - -1.47 -0.71 -3.75 - - - - - -6.29 - - - - - -5.94 - - - - - -2.06 - - - - - - - - - - - - - - - - - - -
-6.27 -0.23 -8.65 -6.31 5.12 1.49 2.04 2.67 -8.05 -7.4 -8.88 - - - - - - - - -9.92 - - - - - - - - - - - - - - - - - - - - - - - -8.79 - - - - -
-6.13 -2.94 -7.52 -8.34 4.89 1.47 2.75 3.26 -11.69 -6.82 -9.73 - - - - - - -13.42 - -10.68 - - - - - - - - - - - - - - - - - - - - - - - -8.01 - - - - -
-6.12 -1.57 -8.89 -6.2 5.05 1.14 2.35 3.03 -11.31 -7.14 -10.16 - - -11.95 - - - - - -10.78 - - - - - - - - - - - - - - - - - - - - - - - -7.81 - - - - -
-3.43 - - - 5.25 0.34 0.55 2.67 - - - - - - - - - - - - - -4.01 -3.98 -3.73 - - - - - - - - - - -0.43 - - - - - -3.88 - -2.14 - -0.75 - - - -
-3.86 -0.75 - 2.53 4.77 -0.44 2.94 2.59 - - -7.49 - - -0.38 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.62 0.64 - -0.43 5.03 - 0.09 2.01 1.04 - - - - - - - - - - - - - -3.23 - 2.18 - - - - - - -0.93 - - - - - - - - - - - - - - - 0.5 -
-3.96 0.86 - 3.0 5.13 - 0.44 1.38 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.61 0.99 -4.08 2.39 4.9 1.79 -0.08 0.48 -0.75 -1.01 -0.8 - - - - - - -3.0 - -1.85 -4.57 - - - - -1.13 -0.99 - - - - -1.09 0.48 - - - - - - - -4.42 -3.32 - -3.11 -1.38 -1.49 - - -
-7.67 -2.37 - 3.35 5.13 -2.62 0.67 0.79 - - - - - - - - - - - - - - - - - - - - - - - -5.72 - - - - - - - - - - - -7.05 - - - - -
-7.67 -2.37 - 3.35 5.13 -2.62 0.67 0.79 - - - - - - - - - - - - - - - - - - - - - - - -5.72 - - - - - - - - - - - -7.05 - - - - -
-4.29 0.3 -2.97 4.08 4.53 - 1.16 0.74 - -1.71 -3.96 - - 1.68 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-4.83 0.23 - 4.3 4.42 0.01 -0.37 1.24 -3.45 - - - - 1.16 - - - - - - - -4.67 - - - - - - - - - -3.41 - - - - - - - - - -4.0 - - - - - - -
-5.39 -3.98 -8.19 4.7 4.14 2.2 -2.04 -2.25 -5.73 -5.39 -4.6 - -5.84 - - - -5.88 -5.2 - -6.3 - -7.62 - -6.11 - -4.22 - - - - -5.86 -6.26 - - - - - - - - -8.54 - - -9.22 - -6.57 - -6.42 -
-5.97 -5.74 -8.09 4.22 4.73 1.7 -2.11 -2.62 -8.06 -8.96 -5.39 -10.27 -8.7 -8.64 - - -7.25 -6.9 - -8.24 -12.63 -9.79 -12.04 -11.36 -6.54 -7.39 -5.96 - - - - -9.74 -7.58 - -8.75 - -8.7 - - -12.22 - -9.13 - -10.0 - -8.0 - -8.38 -4.75
- -2.66 -7.91 1.46 5.28 -0.04 -1.28 -1.97 - - -6.29 -6.26 - - -0.71 -1.18 - -2.23 - -2.88 -2.16 -8.69 -3.18 -7.88 - -1.42 -1.83 -3.07 -3.08 -1.38 -3.93 -2.46 -4.41 -4.25 -2.1 -3.66 -1.61 -3.13 -2.05 -2.94 -2.92 -2.22 -2.52 - -1.73 -2.11 - - -
1.02 1.59 -3.19 3.02 3.98 -0.5 1.58 1.36 0.47 -1.04 0.16 -2.48 -0.82 -0.19 -6.45 -7.64 0.47 -0.16 -0.8 -3.88 -3.29 -3.2 -3.34 -3.65 -2.67 -3.8 -7.23 -3.17 -3.5 -2.57 -3.2 -2.74 -3.43 -4.8 -3.34 -2.69 -3.33 -3.05 -3.08 -5.59 -5.0 -4.89 -4.39 -1.85 -4.01 -2.19 0.51 0.4 -0.42
-6.02 -1.59 -3.11 2.59 5.24 -2.17 0.33 0.75 -5.71 -1.94 -2.48 -5.28 - -0.52 - - - - - -10.15 - - - - - -5.16 - - - - - -5.67 - - - - - - - - - - - -9.05 -3.07 -2.77 - - -
-2.29 -1.49 -3.6 4.15 4.56 0.59 1.0 0.94 -4.51 -4.43 -2.49 -7.9 -3.2 -3.73 -4.32 -6.43 -3.52 -3.47 -3.83 -3.7 -7.43 -8.39 -6.98 -7.67 -2.46 -5.24 -2.56 -8.37 -5.72 -7.03 -6.26 -6.05 -6.91 -8.29 - -6.66 -7.58 -6.82 -6.21 -7.7 -6.6 -7.44 -6.77 -3.91 -4.86 -5.63 -4.02 -3.93 -4.0
-1.19 1.79 - - 5.47 - - - - - -3.99 -0.97 - - - - - -2.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.61 -0.11 -2.28 4.15 3.98 0.6 2.41 2.75 -1.35 - -5.34 - - - - - - -8.01 - - - - - -6.62 - - - - - - - - - - - - - - - - - - - - - - -3.69 -3.89 -
-3.96 -1.75 -3.45 4.53 4.04 -0.2 1.56 2.34 -3.7 -6.91 -8.55 - - -7.79 - - - -12.39 - -13.72 - - - -10.0 - - - - - - - -7.69 - -6.37 - - - - - - - - - -7.52 -6.98 - -6.89 -5.21 -
-5.59 -0.45 - 0.84 5.45 - - - - - - - - 1.48 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-6.49 -5.2 -6.56 4.58 4.13 2.51 -0.11 -0.23 -11.58 -7.58 -5.85 -15.11 -11.85 -11.56 - - -14.14 -9.48 -10.11 -12.53 -13.09 -13.05 -13.57 -14.79 -8.05 - - -11.73 -12.39 - -11.52 -11.67 -12.72 -12.44 - - - -12.19 - -12.06 -13.08 -12.44 -12.78 -9.24 -9.4 -8.47 -9.23 -12.35 -
-6.65 -7.68 -6.94 4.3 4.5 2.45 -1.77 -1.75 -10.02 -8.17 -6.31 -8.6 -9.71 -10.79 -9.13 - -14.65 -8.64 -8.4 -9.91 -15.3 -13.26 - - -8.96 -5.81 -2.88 - - - - - - - - - - - - -14.79 - - - -6.22 -4.48 -4.26 -2.68 -3.32 -7.0
-4.2 -1.5 -5.46 -4.8 5.45 0.05 -6.33 -5.74 -4.06 -6.98 -6.28 -7.25 -0.35 0.07 - - - -3.77 - -4.5 -3.25 -7.86 -3.5 -8.55 -2.92 -3.71 - -4.88 - -5.12 - -4.7 -3.48 - -2.84 -3.52 -1.83 -2.67 -3.43 -6.98 -5.83 -5.01 -5.68 -3.43 -3.46 -2.72 - - -
0.74 0.31 0.94 3.73 3.39 -1.6 1.11 0.87 -0.12 -0.72 0.63 -5.84 -1.04 -0.79 -1.37 -1.5 0.67 -0.83 -2.97 -0.91 -6.1 -8.36 -6.98 -9.42 -0.99 -1.02 0.53 -5.59 - -3.64 - -5.74 - - - - -4.7 -5.05 -6.0 -5.99 -6.03 -6.33 -5.72 -0.41 -0.08 -1.22 -0.6 0.52 0.51
2.01 -0.03 1.69 -5.34 4.87 1.58 -5.88 -7.46 -0.63 -7.71 -3.14 -2.07 -4.0 -0.53 -2.09 -3.11 -7.06 -3.18 1.46 -1.35 -3.88 -5.13 -4.15 -4.05 - -1.7 -3.4 - -4.3 - - -3.45 - - -2.92 - - - -3.73 -4.9 -4.23 -3.05 -3.15 -1.07 -0.29 -0.78 - - -
1.42 0.0 1.33 - 4.92 0.66 - - 1.15 - -3.16 -0.16 - -4.75 -1.05 - -6.01 -2.43 0.82 -1.15 -5.52 - -5.94 - - -2.74 -1.78 - - - - -5.31 - - - - - -3.16 - -6.28 -4.88 -6.57 -6.5 -1.27 1.11 0.58 - - -
-1.54 0.45 - 4.59 4.06 -1.86 -1.12 -1.12 - -2.78 -1.74 - - 1.88 - - -3.35 -4.37 - - - - - - - -1.0 - - - - - - - - - - - - - - - - -3.59 -3.81 -1.11 - - - -
-1.67 0.44 -1.27 1.54 5.25 - -0.76 -2.55 -2.46 - -4.34 - -2.57 -1.73 - - 1.9 -3.2 - - - - - - - - - - - - - - - - - - - - - - - - - -5.57 - -0.84 - - -
1.31 0.4 -5.24 3.87 4.45 -0.86 -0.77 -0.2 - -4.22 -0.68 - -3.9 -0.34 - - -3.67 -3.35 - 0.43 -4.22 - -4.54 - -0.8 -0.37 -0.05 -3.57 - - - -4.48 - - - - - - -2.36 -7.11 -5.06 - -6.32 -3.95 -3.87 -3.64 -2.39 -2.52 -2.38
0.07 -0.2 -0.39 3.95 3.41 1.97 -0.47 -0.17 -1.77 -3.76 -0.61 - -0.76 0.2 -2.01 -0.66 -0.12 -0.33 -1.28 -0.75 -3.45 -3.71 -4.16 -3.54 1.37 -1.82 -0.39 -4.13 -2.56 - -3.41 -2.29 -4.09 -3.61 -2.92 -2.55 -4.02 -3.36 - -3.94 -3.45 -2.81 -3.81 -1.88 -4.75 -2.83 -0.01 -0.23 -0.72
-3.35 1.03 0.84 2.16 4.9 1.57 0.01 0.66 -0.24 - -2.93 -2.07 - - - - -2.98 -4.54 1.23 - - - - -4.85 - - - - - - - - - - - - - - - - - - - -4.87 - -2.26 -1.91 - -0.02
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.