Heatmap: Cluster_211 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo405887 (PACid_15416283)
1.04 0.61 0.24 0.54 0.94 1.39 1.33 1.1 0.91 1.65 1.21 0.67 -4.16 -1.56 -3.33 -4.46 -3.65 -4.21 -1.48 - - - -0.41 -0.48 -2.46 0.22 -0.37 0.82 -1.34 -0.82 -2.44 -2.79
Smo432161 (PACid_15401295)
0.19 0.16 0.54 0.85 0.96 1.49 1.34 1.13 1.05 0.93 1.26 0.6 -0.89 -0.4 -1.89 -1.76 -2.37 -1.92 0.04 - - - -1.15 -0.59 -0.74 -1.15 -1.01 -0.2 -0.73 -0.14 -1.72 -1.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.