Heatmap: Cluster_189 (HCCA cluster)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial tissue - Light - ZT1	Aerial tissue - Light - ZT3	Aerial tissue - Light - ZT5	Aerial tissue - Light - ZT7	Aerial tissue - Light - ZT9	Aerial tissue - Light - ZT11	Aerial tissue - Dark - ZT1	Aerial tissue - Dark - ZT3	Aerial tissue - Dark - ZT5	Aerial tissue - Dark - ZT7	Aerial tissue - Dark - ZT9	Aerial tissue - Dark - ZT11	Roots	Root elongation and differentiation zone	Root meristematic zone	Aerial roots and rhizophores	Shoot tips	Microphyll	Strobili	Shoot apical meristem - AC	Shoot apical meristem - Core	Shoot apical meristem - P1	Stem - Top	Stem - Bottom	Whole plant	Aerial tissue - Stress - Dark	Aerial tissue - Stress - High light	Aerial tissue - Stress - Cont	Aerial tissue - Stress - 37C 1h	Aerial tissue - Stress - 37C 3h	Aerial tissue - Stress - 4C 1h	Aerial tissue - Stress - 4C 3h
Smo102633 (PACid_15407521)	-0.08	-0.26	-0.25	0.0	0.23	0.31	0.3	0.58	0.41	0.36	0.28	0.15	-0.25	-0.93	0.17	-0.19	-0.42	-1.03	0.0	-3.37	-4.46	-5.0	-0.13	-0.14	-0.76	1.18	0.9	0.92	0.04	-0.02	-0.08	0.19
Smo111629 (PACid_15411919)	-0.11	-0.32	-0.53	-0.28	-0.19	0.19	0.51	0.66	0.72	0.6	0.54	0.11	-0.28	-1.17	1.22	0.07	-0.52	-1.01	0.01	-4.1	-2.88	-1.42	-1.02	-1.05	-1.66	0.71	1.11	1.07	-0.34	-0.2	-0.17	-0.16
Smo11806 (PACid_15405461)	0.22	0.16	-0.1	0.03	0.21	0.38	0.38	0.51	0.13	0.15	0.17	0.04	-1.59	-0.85	1.07	-0.33	-0.61	-0.57	0.72	-	-2.83	-	-0.78	-0.74	-	0.43	1.48	1.38	-0.09	-0.08	-0.48	-0.31
Smo131125 (PACid_15422372)	-0.03	0.17	0.14	0.26	0.09	0.26	0.25	0.29	0.11	0.09	-0.13	-0.07	-0.37	-0.32	0.57	-0.11	-0.31	-0.98	0.37	-1.91	-1.65	-2.9	-0.4	-0.36	-0.56	0.91	0.87	0.9	0.01	-0.03	0.02	-0.29
Smo133452 (PACid_15408266)	-0.46	-0.37	-0.07	0.35	0.42	0.15	0.13	0.15	0.05	0.04	-0.0	-0.41	-0.86	-0.04	0.58	-0.26	0.01	-1.23	0.65	-1.53	-2.52	-2.52	-0.18	-0.37	-1.98	1.19	1.1	1.12	-0.4	-0.33	0.07	0.21
Smo139448 (PACid_15403451)	-0.11	-0.06	0.02	0.15	-0.02	0.06	0.21	0.38	0.46	0.41	0.46	0.28	-0.26	-0.19	0.32	-0.02	-0.33	-0.99	0.03	-1.48	-2.37	-1.32	-0.34	-0.23	-0.85	0.86	0.69	0.62	-0.26	-0.32	0.14	0.12
Smo148115 (PACid_15405373)	-0.28	-0.36	-0.21	0.07	0.3	0.24	0.4	0.58	0.35	0.24	0.13	-0.1	-0.19	-0.76	0.7	-0.03	-0.53	-1.28	0.14	-2.5	-3.43	-2.88	-0.39	-0.04	-2.79	1.06	1.12	1.07	-0.21	-0.06	-0.04	0.07
Smo152781 (PACid_15422049)	-0.12	0.12	0.39	0.18	0.37	0.21	0.05	0.37	0.02	-0.05	0.11	-0.07	-0.04	-0.66	0.22	0.25	-0.12	-0.79	0.12	-2.69	-3.33	-4.49	-0.32	-0.18	-2.05	1.01	1.06	1.16	-0.21	-0.1	-0.06	-0.17
Smo163635 (PACid_15409083)	0.02	0.09	-0.1	0.27	0.56	0.49	0.3	0.56	0.26	0.2	0.02	-0.12	-0.39	-0.76	0.26	-0.08	-0.22	-1.0	0.34	-	-6.57	-	-0.21	-0.27	-2.56	1.09	1.08	1.27	0.09	0.14	-0.86	-0.82
Smo169846 (PACid_15405820)	-0.13	-0.12	-0.11	0.03	0.15	0.13	0.22	0.22	0.05	0.03	-0.01	-0.11	-0.13	-0.51	0.55	0.14	-0.46	-0.84	0.23	-2.54	-2.04	-3.16	-0.36	-0.18	0.23	1.12	1.1	1.03	-0.34	-0.28	-0.12	-0.27
Smo173175 (PACid_15412602)	0.0	-0.06	0.06	0.05	0.23	0.19	0.13	0.34	0.19	0.06	0.13	-0.11	-0.11	-0.24	0.74	-0.03	-0.25	-0.54	-0.1	-2.0	-2.54	-1.7	-0.11	-0.07	-1.21	0.97	0.84	0.94	-0.17	-0.07	-0.33	-0.26
Smo177376 (PACid_15403381)	0.14	0.01	0.29	0.3	-0.01	0.21	0.43	0.72	0.66	0.72	0.52	0.4	-0.18	-0.39	0.13	0.03	-0.42	-0.87	-0.01	-10.0	-5.41	-6.01	-0.24	-0.24	-3.67	0.78	0.49	0.42	-0.12	-0.15	0.1	0.13
Smo177444 (PACid_15404071)	-0.4	-0.41	-0.31	0.16	0.32	0.34	0.32	0.62	0.34	0.09	-0.06	-0.34	0.15	-0.28	0.24	0.25	-0.62	-1.64	0.45	-3.07	-1.93	-1.61	-0.12	0.04	-0.39	1.11	1.02	1.01	-0.43	-0.37	-0.61	-0.42
Smo181271 (PACid_15414775)	0.12	0.06	0.08	0.48	0.43	0.43	0.33	0.42	0.36	0.24	0.1	0.04	-0.43	0.09	-0.27	-0.2	-0.15	-0.91	0.05	-3.91	-1.45	-4.22	-0.1	-0.21	-0.12	0.64	0.79	0.85	-0.33	-0.22	-0.37	-0.21
Smo185811 (PACid_15408432)	0.17	-0.08	-0.12	0.11	0.11	0.17	0.08	0.28	0.16	0.13	0.11	-0.05	-0.07	0.13	0.59	0.28	-0.35	-0.74	0.06	-2.28	-4.55	-1.9	-0.23	-0.22	-1.82	1.03	1.1	0.94	-0.25	-0.2	-0.3	-0.22
Smo232856 (PACid_15422714)	-0.09	-0.08	-0.12	0.19	0.28	0.1	0.34	0.58	0.56	0.52	0.43	0.23	-0.25	-0.3	0.26	-0.05	-0.48	-0.9	0.01	-2.23	-2.02	-1.8	-0.32	-0.2	-0.96	0.83	0.49	0.29	-0.12	-0.12	-0.04	0.44
Smo233936 (PACid_15403971)	0.15	0.01	-0.03	0.31	0.36	0.23	0.25	0.58	0.33	0.31	0.29	0.1	-0.05	-0.07	0.65	-0.12	-0.67	-1.39	-0.16	-10.41	-5.37	-5.15	-0.43	-0.32	-2.96	1.22	0.92	0.86	-0.49	-0.46	0.18	0.13
Smo268301 (PACid_15413379)	0.03	-0.21	-0.18	0.14	0.07	-0.04	-0.14	0.08	0.2	0.05	-0.03	-0.09	0.02	0.33	0.41	0.54	-0.42	-0.87	0.59	-3.18	-1.96	-3.49	-0.12	0.05	-0.9	1.09	0.87	0.89	-0.41	-0.15	-0.29	-0.06
Smo272178 (PACid_15401569)	0.16	-0.03	-0.02	0.23	0.15	0.06	0.21	0.49	0.41	0.44	0.39	0.34	-0.64	0.02	0.34	-0.33	-0.3	-0.8	-0.21	-3.73	-1.32	-1.76	-0.5	-0.44	-0.45	0.9	0.61	0.61	-0.28	-0.29	0.15	0.25
Smo402481 (PACid_15404308)	-0.11	0.09	-0.01	0.23	0.3	0.32	0.48	0.37	0.17	0.12	0.06	-0.1	-0.07	-0.72	0.11	0.16	-0.55	-1.03	0.04	-1.58	-2.25	-1.45	-0.4	-0.43	-0.56	0.91	1.22	1.34	-0.44	-0.35	-0.7	-0.84
Smo402861 (PACid_15407314)	0.07	0.04	0.04	0.23	0.3	0.29	0.35	0.51	0.39	0.33	0.31	0.1	-0.54	-1.03	-0.22	-0.26	-0.58	-1.12	0.01	-2.37	-2.64	-1.77	-0.35	-0.43	-2.33	1.12	1.23	1.06	-0.4	-0.28	-0.02	0.2
Smo406615 (PACid_15417497)	-0.04	0.17	0.16	0.18	0.34	0.28	0.3	0.35	0.11	0.12	-0.05	-0.13	-0.06	-0.45	0.11	0.12	-0.24	-0.86	0.3	-	-	-	-0.23	-0.2	-2.29	1.07	1.26	1.39	-0.15	-0.13	-0.7	-0.67
Smo429498 (PACid_15417010)	0.34	0.3	0.29	0.34	0.21	0.33	0.25	0.39	0.41	0.32	0.2	0.08	-0.5	-1.11	0.69	-0.43	-0.34	-0.99	0.09	-8.18	-3.07	-2.18	-0.68	-1.04	-3.46	1.12	0.93	1.33	-0.01	-0.14	-0.44	-0.58
Smo430219 (PACid_15418484)	-0.05	0.33	0.15	0.1	0.51	0.04	0.37	0.2	0.07	0.14	0.16	-0.23	-0.22	-0.4	-0.2	0.22	-0.48	-1.34	0.06	-	-5.04	-4.68	-0.23	-0.11	-1.29	1.17	1.45	1.6	-0.32	-0.25	-1.3	-1.12
Smo437336 (PACid_15417439)	-0.11	-0.12	0.01	0.23	0.33	0.3	0.43	0.66	0.51	0.5	0.33	0.16	-0.48	-0.5	0.02	-0.34	-0.58	-1.28	0.07	-1.62	-1.55	-2.37	-0.54	-0.42	-0.51	0.72	0.89	0.92	-0.31	-0.2	-0.14	0.02
Smo437796 (PACid_15420626)	-0.09	0.01	-0.08	0.34	0.44	0.35	0.39	0.5	0.43	0.26	0.22	0.02	0.12	-0.66	-0.19	0.14	-0.45	-1.25	-0.05	-1.63	-3.9	-2.66	-0.22	-0.2	-0.88	0.81	1.2	1.22	-0.32	-0.29	-0.81	-0.84
Smo439124 (PACid_15421614)	-0.16	-0.21	-0.19	0.05	0.33	0.31	0.29	0.41	0.15	0.06	0.01	-0.42	-0.02	-1.04	0.27	-0.0	-0.46	-0.23	0.11	-4.72	-1.77	-2.34	-0.01	0.13	-0.85	0.97	1.29	1.13	-0.17	-0.13	-0.39	-0.5
Smo439355 (PACid_15423237)	-0.16	-0.31	-0.22	0.23	0.42	0.33	0.52	0.71	0.45	0.39	0.25	0.04	-0.22	-0.52	-1.1	0.16	-0.58	-2.21	0.43	-5.33	-2.63	-4.95	-0.2	-0.33	-1.54	1.18	0.96	0.94	-0.17	-0.17	0.14	0.14
Smo439455 (PACid_15401736)	-0.16	-0.49	-0.32	0.03	0.5	0.51	0.64	0.7	0.57	0.3	0.21	0.09	-0.68	-1.25	-0.15	-0.23	-0.66	-1.89	-0.05	-4.03	-2.51	-1.11	-0.72	-0.49	-1.59	1.43	1.23	1.31	-0.3	0.01	-0.79	-0.6
Smo440240 (PACid_15403339)	-0.11	-0.29	-0.23	0.23	0.37	0.37	0.54	0.68	0.48	0.5	0.28	0.26	-0.39	0.22	-0.15	-0.11	-0.51	-1.79	0.27	-3.84	-2.88	-4.18	-0.37	-0.48	-0.99	0.93	0.92	0.98	-0.26	-0.2	-0.23	-0.29
Smo440330 (PACid_15404069)	0.18	0.32	0.37	0.39	0.39	0.27	0.06	0.15	0.15	0.08	0.17	0.03	-0.02	-0.15	0.48	0.31	-0.13	-0.92	0.22	-4.34	-2.95	-3.12	-0.31	-0.29	-0.65	0.75	0.72	0.83	-0.18	-0.01	-0.54	-0.54
Smo442419 (PACid_15410797)	-0.15	0.15	0.17	0.29	0.4	0.25	0.19	0.37	0.16	0.2	0.06	-0.08	0.1	-0.22	0.44	0.28	-0.47	-0.94	0.73	-8.39	-	-	-0.19	-0.08	-4.09	0.83	1.12	1.15	-0.13	-0.07	-0.92	-0.8
Smo442877 (PACid_15414045)	-0.5	-0.31	-0.28	0.05	0.3	0.39	0.51	0.58	0.38	0.19	0.04	-0.35	-0.36	-0.09	0.49	0.03	-0.92	-1.68	0.17	-1.18	-2.25	-0.75	-0.48	-0.38	-0.75	1.09	1.22	1.11	-0.53	-0.38	-0.5	-0.53
Smo443474 (PACid_15413914)	-0.03	-0.15	-0.11	0.02	-0.42	-0.08	0.28	0.56	0.39	0.47	0.43	0.18	-0.4	0.05	0.83	-0.17	-0.69	-1.68	0.11	-3.92	-	-1.98	-0.34	-0.49	-1.46	0.69	1.34	1.31	0.07	0.12	-0.7	-0.76
Smo446134 (PACid_15420176)	0.09	0.04	-0.04	0.14	0.4	0.04	0.06	0.17	0.39	0.23	0.28	0.14	-0.19	0.33	0.52	-0.14	-0.32	-0.96	-0.22	-3.82	-1.79	-3.04	-0.22	-0.05	-1.04	1.18	0.9	0.85	-0.34	-0.27	-0.43	-0.35
Smo61964 (PACid_15420095)	-0.19	-0.18	0.06	0.17	0.26	0.13	0.19	0.27	0.14	0.03	0.0	-0.09	-0.44	-0.2	0.75	-0.12	-0.05	-1.2	0.46	-3.07	-4.7	-3.67	-0.05	-0.0	-2.03	0.61	1.1	1.03	-0.12	-0.05	0.11	0.36
Smo75763 (PACid_15415158)	-0.18	0.04	0.09	0.38	0.5	0.34	0.26	0.32	0.02	-0.14	-0.09	-0.39	-0.03	-0.11	0.42	0.21	-0.28	-1.07	0.06	-4.35	-2.49	-4.99	0.03	0.05	-0.97	0.69	1.0	0.96	-0.49	-0.41	0.2	0.3
Smo76001 (PACid_15412591)	-0.61	-0.25	-0.05	0.18	0.25	0.36	0.16	0.4	0.16	-0.1	-0.23	-0.54	-0.23	-0.39	-0.48	0.44	-0.27	-1.2	0.74	-	-5.59	-	-0.33	-0.42	-2.57	1.24	1.43	1.54	-0.1	-0.05	-0.32	-0.17
Smo76535 (PACid_15416421)	0.01	-0.18	-0.06	0.01	0.2	0.04	0.09	0.31	0.19	0.13	0.12	-0.03	0.06	0.08	0.64	0.23	-0.39	-0.93	0.29	-2.67	-2.99	-2.82	-0.2	-0.1	-1.62	1.08	0.9	0.98	-0.26	-0.14	-0.19	-0.19
Smo78287 (PACid_15420126)	-0.16	0.02	0.02	0.27	0.53	0.3	0.16	0.25	0.15	0.1	0.02	-0.04	0.12	-0.47	-0.1	0.58	-0.43	-1.4	0.56	-2.74	-4.29	-5.99	0.05	0.16	-1.9	1.14	0.99	1.05	-0.12	-0.01	-0.91	-0.87
Smo78845 (PACid_15402274)	-0.17	-0.15	0.0	0.04	0.24	0.11	0.27	0.35	0.21	0.16	0.19	-0.07	-0.14	-0.47	0.52	-0.03	-0.6	-0.87	0.29	-2.11	-2.73	-1.1	-0.26	-0.13	-0.82	1.08	1.07	1.16	-0.44	-0.39	-0.41	-0.44
Smo79603 (PACid_15403486)	0.06	-0.09	0.02	0.06	0.08	0.09	-0.01	0.2	0.01	-0.06	-0.04	-0.12	0.04	-0.11	0.34	0.27	-0.21	-0.59	0.27	-3.79	-3.57	-3.19	-0.17	-0.05	-0.32	1.08	1.02	1.04	-0.24	-0.13	-0.15	-0.19
Smo81472 (PACid_15408278)	0.03	0.12	0.18	0.24	0.38	0.42	0.17	0.4	0.16	0.15	0.12	-0.13	0.26	-0.22	0.5	0.24	-0.34	-1.01	0.17	-3.29	-4.43	-3.47	-0.39	-0.15	-0.84	0.83	0.84	0.89	-0.39	-0.32	-0.32	-0.09
Smo82814 (PACid_15414278)	-0.01	-0.02	-0.45	-0.06	0.17	0.2	0.39	0.44	0.42	0.55	0.33	0.12	-0.25	-0.71	0.73	-0.13	-0.54	-0.55	0.1	-2.16	-2.1	-3.77	-0.24	0.12	-0.93	0.63	0.74	0.57	-0.24	-0.14	0.12	0.31
Smo87459 (PACid_15403438)	0.28	0.29	0.22	0.41	0.52	0.13	0.12	0.33	0.1	0.21	0.09	0.08	0.05	0.12	0.43	0.27	-0.44	-1.15	-0.22	-4.26	-2.94	-4.5	-0.29	-0.25	-1.72	0.94	1.02	0.87	-0.58	-0.49	-0.09	-0.22
Smo90980 (PACid_15416445)	0.18	0.08	0.1	0.1	0.34	0.32	-0.01	0.1	0.29	0.2	0.07	0.13	0.37	-0.19	-0.12	0.42	-0.43	-3.12	-0.02	-3.88	-3.02	-	0.07	0.12	-2.31	1.06	1.11	1.23	-0.21	-0.02	-0.87	-0.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.