Heatmap: Cluster_365 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo137771 (PACid_15422279)
0.4 0.52 0.74 -1.06 -0.12 0.27 -1.67 -1.0 -0.51 -0.11 -0.77 0.14 - 0.66 -2.71 -1.99 -0.83 -0.19 -0.97 2.54 -2.42 - -1.21 -2.15 2.03 -0.31 -1.11 1.29 -0.76 -0.53 -0.49 -1.23
Smo137836 (PACid_15422936)
0.87 1.74 1.07 0.83 -0.51 0.36 0.04 -0.95 -0.13 0.01 0.8 0.04 - -0.91 -3.04 -3.72 -1.29 0.24 -1.07 2.74 - - -2.22 -3.95 -0.41 -2.89 -2.49 -0.67 0.04 -0.7 -0.1 -0.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.