Heatmap: Cluster_200 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00222960 (evm_27.TU.AmTr_v1.0_scaffold00002.242)
-0.85 -1.34 -0.27 2.01 0.62 -6.66 -2.66 -3.47 -1.96 -1.93 0.71 0.34 0.21 -0.13 0.68 0.26 -0.18 0.2 0.09 0.47 -0.89 0.15
AMTR_s00002p00240930 (evm_27.TU.AmTr_v1.0_scaffold00002.302)
-1.89 0.46 -0.81 1.61 0.65 0.04 -1.28 -2.29 -1.95 -2.12 0.72 0.43 0.06 0.08 -0.69 0.09 0.32 0.16 0.65 -0.07 -0.56 -0.52
AMTR_s00002p00250530 (evm_27.TU.AmTr_v1.0_scaffold00002.354)
0.18 0.1 0.44 0.83 -1.41 -2.56 -1.78 -3.56 -0.47 -0.88 0.45 0.38 0.33 0.37 -0.11 0.26 0.25 0.42 0.25 0.03 0.34 0.16
AMTR_s00003p00271780 (evm_27.TU.AmTr_v1.0_scaffold00003.470)
- -3.62 -2.22 2.07 -0.88 -1.83 -1.2 -3.3 -0.5 -0.86 0.7 0.82 -0.66 -0.1 0.38 0.17 1.07 0.35 -0.06 0.48 -0.02 -0.29
AMTR_s00004p00132530 (evm_27.TU.AmTr_v1.0_scaffold00004.126)
0.65 - -1.14 1.6 -0.65 - -6.92 -8.3 -7.17 -8.15 0.76 0.43 0.92 0.65 0.32 0.74 0.31 -0.43 0.13 -0.03 0.15 0.76
AMTR_s00005p00079980 (evm_27.TU.AmTr_v1.0_scaffold00005.13)
0.13 - - 1.22 -0.81 - 0.23 - -1.73 -0.77 2.49 - - - -3.17 - 0.64 - 2.62 0.32 -0.37 -1.04
AMTR_s00005p00164560 (evm_27.TU.AmTr_v1.0_scaffold00005.50)
0.24 -0.47 -0.4 1.59 -2.95 - -5.74 -9.37 -5.09 -4.63 0.93 1.02 -0.98 -0.48 -2.0 1.32 0.35 1.11 0.37 -0.56 1.21 -1.03
AMTR_s00006p00035230 (evm_27.TU.AmTr_v1.0_scaffold00006.8)
-2.53 - - 0.59 -2.02 - -4.21 -6.0 -3.76 -3.26 1.73 0.12 0.21 0.14 -2.1 0.55 -0.12 1.22 1.62 1.06 1.01 0.06
AMTR_s00006p00261340 (evm_27.TU.AmTr_v1.0_scaffold00006.232)
-1.0 -0.81 0.52 1.65 0.72 -0.77 -1.78 -1.75 -2.75 -2.31 0.83 0.37 0.05 -0.51 -0.39 0.01 0.94 -0.45 0.02 0.42 -0.68 -0.02
AMTR_s00007p00266960 (evm_27.TU.AmTr_v1.0_scaffold00007.379)
-2.05 -3.85 0.6 1.99 -0.17 -1.54 -2.49 -2.99 -0.77 -1.22 0.42 0.48 -0.05 -0.51 0.57 -0.22 0.15 -0.16 -0.15 0.24 1.07 -0.49
AMTR_s00009p00261350 (evm_27.TU.AmTr_v1.0_scaffold00009.331)
0.69 0.39 0.43 0.28 0.0 -0.46 -1.51 -2.23 -2.04 -2.01 0.81 0.69 1.04 -0.23 0.15 -0.06 0.96 -0.82 -1.07 -1.33 -2.81 0.89
AMTR_s00010p00170700 (evm_27.TU.AmTr_v1.0_scaffold00010.136)
-0.03 0.55 -1.55 1.62 -1.06 -5.81 -7.15 -7.1 -4.84 -5.8 0.38 0.21 0.21 0.12 1.07 -0.09 0.93 0.08 0.1 0.51 -0.81 0.85
AMTR_s00010p00231390 (evm_27.TU.AmTr_v1.0_scaffold00010.266)
- - - 2.67 -2.35 - -4.62 - -3.26 -4.58 1.79 0.82 -2.53 0.24 -2.73 -2.08 0.76 0.1 1.0 1.18 -0.78 -0.62
AMTR_s00012p00185720 (evm_27.TU.AmTr_v1.0_scaffold00012.117)
-0.81 0.75 -1.94 0.34 0.46 -3.42 -1.56 -6.9 -2.25 -2.08 1.4 0.58 1.23 0.28 0.26 -0.14 0.77 -0.52 0.14 -0.03 -1.12 0.31
AMTR_s00012p00263510 (evm_27.TU.AmTr_v1.0_scaffold00012.344)
-0.54 0.93 0.67 1.58 -0.23 -4.12 -2.06 -3.77 -1.86 -2.16 0.31 0.26 0.32 -0.4 0.02 -0.74 1.09 0.14 -0.17 0.07 -0.97 0.45
AMTR_s00013p00165620 (evm_27.TU.AmTr_v1.0_scaffold00013.89)
- -0.29 -9.26 1.28 0.43 - -2.13 -0.16 -1.5 -1.39 1.01 0.4 -0.39 0.64 -0.48 1.09 1.24 -0.22 -0.07 -0.53 0.31 -0.1
AMTR_s00019p00249840 (evm_27.TU.AmTr_v1.0_scaffold00019.404)
-3.63 -4.36 - 2.13 -0.39 - -2.06 - -2.11 -2.62 2.09 -1.59 0.02 -0.8 -0.74 -2.15 1.88 0.22 -0.43 -1.42 0.87 0.37
AMTR_s00022p00241860 (evm_27.TU.AmTr_v1.0_scaffold00022.350)
0.07 0.04 -1.23 1.6 -0.02 -5.99 -1.53 -6.9 -1.37 -1.74 0.45 -0.18 0.3 0.47 0.16 0.71 0.8 -0.34 -0.18 0.21 0.13 0.18
AMTR_s00025p00057340 (evm_27.TU.AmTr_v1.0_scaffold00025.34)
-1.09 - - 2.19 -0.68 - -2.11 -1.99 -1.26 -1.51 1.04 1.31 0.56 0.4 -0.59 0.09 1.09 -0.37 -1.47 -0.66 -1.02 0.71
AMTR_s00029p00248620 (evm_27.TU.AmTr_v1.0_scaffold00029.451)
1.54 - - 2.0 -1.39 - -5.75 -3.75 -2.93 -3.43 0.89 0.88 -1.35 -0.96 -1.15 -0.15 0.97 0.53 -0.01 -0.77 1.6 -1.29
AMTR_s00033p00200750 (evm_27.TU.AmTr_v1.0_scaffold00033.165)
0.41 -1.25 0.92 1.54 0.41 -5.94 -7.09 -7.82 -6.61 -6.21 0.53 0.13 -0.2 -0.21 0.86 -0.17 0.94 -0.17 -0.35 0.12 0.85 -0.68
AMTR_s00033p00201280 (evm_27.TU.AmTr_v1.0_scaffold00033.170)
- - 1.47 1.89 -0.19 - -4.94 - -4.91 -4.94 1.57 -0.35 -0.91 -1.4 -1.38 0.13 1.65 -0.86 0.38 -0.24 0.79 -0.24
AMTR_s00035p00240710 (evm_27.TU.AmTr_v1.0_scaffold00035.64)
- -0.43 - 2.62 0.45 - -6.3 -2.66 -1.73 -2.68 0.34 0.32 -0.77 0.04 0.29 -0.66 0.92 0.45 -1.94 0.32 0.56 -0.18
AMTR_s00036p00074650 (evm_27.TU.AmTr_v1.0_scaffold00036.27)
-0.17 -0.05 -0.25 2.04 0.52 -8.12 -1.72 -6.69 -1.98 -1.56 0.42 -0.04 0.68 0.01 0.37 -0.37 0.48 -0.34 -0.37 -0.02 -0.61 0.33
AMTR_s00044p00155390 (evm_27.TU.AmTr_v1.0_scaffold00044.164)
0.84 0.69 -0.6 1.98 0.21 -6.64 -1.53 -1.11 -0.86 -0.83 0.58 0.08 0.58 -0.17 -0.58 -1.38 -0.82 -0.3 -0.54 -1.0 -1.44 0.98
AMTR_s00045p00115420 (evm_27.TU.AmTr_v1.0_scaffold00045.111)
-0.68 -0.64 0.05 1.91 -1.19 0.88 -0.93 -1.02 -1.29 -1.3 1.23 -0.1 -0.67 -0.5 0.46 -0.6 -2.11 -2.68 -1.13 0.93 -1.35 1.02
AMTR_s00045p00154890 (evm_27.TU.AmTr_v1.0_scaffold00045.168)
0.1 -8.68 1.12 2.21 0.8 -4.74 - -6.96 -9.09 - -0.57 -0.84 -1.27 -1.66 -0.14 0.74 -1.14 0.94 0.77 0.61 0.93 -1.79
AMTR_s00049p00060230 (evm_27.TU.AmTr_v1.0_scaffold00049.35)
0.62 -1.08 0.95 1.83 -0.66 -4.73 -3.14 -7.47 -3.05 -2.95 0.2 0.52 -0.17 -0.99 -1.41 0.67 1.17 0.62 0.75 -0.54 -0.55 -0.51
AMTR_s00049p00146760 (evm_27.TU.AmTr_v1.0_scaffold00049.127)
-0.08 0.03 -0.78 1.16 -1.29 -8.13 -2.65 -8.07 -2.06 -2.44 0.31 0.59 0.43 0.28 1.03 0.04 0.29 0.33 0.24 1.17 -0.69 0.38
AMTR_s00057p00198730 (evm_27.TU.AmTr_v1.0_scaffold00057.228)
1.07 - -0.29 1.83 -0.45 - -0.62 - -0.34 -0.57 0.04 0.65 0.48 -0.36 -0.75 -0.27 1.31 -0.39 -1.16 0.73 -0.45 -1.4
AMTR_s00059p00130960 (evm_27.TU.AmTr_v1.0_scaffold00059.107)
1.68 - -0.3 1.9 -0.32 - - -5.51 -8.42 -8.82 1.68 1.53 -2.33 - -2.63 - 2.59 -1.5 - - - -0.68
AMTR_s00067p00068680 (evm_27.TU.AmTr_v1.0_scaffold00067.44)
0.73 0.98 -5.84 0.46 0.16 - -1.34 -9.15 -0.95 -1.4 1.37 0.19 0.79 0.55 0.2 -0.96 0.38 -0.07 -0.09 -0.07 -0.04 -0.23
AMTR_s00067p00206920 (evm_27.TU.AmTr_v1.0_scaffold00067.231)
- -2.29 -1.28 1.82 -0.07 -6.04 0.15 -5.39 -0.63 -0.56 1.53 -0.04 0.04 0.21 -1.59 -2.56 1.18 0.14 -0.17 1.25 -1.54 -0.15
AMTR_s00067p00207090 (evm_27.TU.AmTr_v1.0_scaffold00067.232)
-5.54 - -3.06 1.41 -1.48 - -0.74 -8.87 -0.81 -0.93 1.66 0.62 -0.87 0.04 -2.05 -1.36 1.74 0.75 0.28 1.25 -0.27 -0.31
AMTR_s00068p00182430 (evm_27.TU.AmTr_v1.0_scaffold00068.140)
0.75 - 0.55 1.13 -2.57 -6.49 -8.73 - -5.44 -7.41 1.2 0.97 0.11 -1.8 -4.14 -3.9 1.47 1.02 0.28 -2.51 -1.25 2.03
AMTR_s00068p00205920 (evm_27.TU.AmTr_v1.0_scaffold00068.184)
-0.16 -0.54 -1.06 1.6 0.12 -7.65 -2.58 -5.0 -2.72 -2.63 0.82 0.03 0.08 0.43 0.95 -0.03 0.77 0.09 0.29 0.67 -0.8 0.05
AMTR_s00071p00135320 (evm_27.TU.AmTr_v1.0_scaffold00071.120)
-1.52 0.61 -0.92 0.87 0.21 -2.23 -0.39 -1.77 0.49 0.12 0.34 0.57 0.48 -0.17 0.32 -0.66 0.47 0.18 0.09 0.12 -1.76 -0.03
AMTR_s00074p00172650 (evm_27.TU.AmTr_v1.0_scaffold00074.87)
-0.98 - - 0.86 -1.89 - -6.29 - - - 2.37 -1.51 -2.45 -0.32 -1.37 - 1.57 0.62 -0.77 1.86 1.14 0.65
AMTR_s00077p00144570 (evm_27.TU.AmTr_v1.0_scaffold00077.144)
-1.46 -1.39 -0.67 1.58 -3.21 - -8.06 -7.25 -6.08 -5.86 1.36 1.6 0.7 -1.92 -1.17 -3.11 1.94 0.32 -0.17 -2.05 -3.27 1.65
AMTR_s00100p00114870 (evm_27.TU.AmTr_v1.0_scaffold00100.36)
- -1.63 -9.12 1.45 -2.35 - -4.66 -8.99 -2.82 -3.38 1.16 0.76 -1.88 -0.36 -0.69 0.55 1.52 0.97 0.65 0.57 1.55 -0.77
AMTR_s00107p00033530 (evm_27.TU.AmTr_v1.0_scaffold00107.12)
-1.6 -2.96 -1.67 1.12 -0.36 -1.31 -2.0 -1.47 -2.13 -1.96 1.83 0.43 0.64 0.24 0.5 -0.91 0.97 0.65 0.21 -0.85 -0.33 0.22
AMTR_s00111p00036140 (evm_27.TU.AmTr_v1.0_scaffold00111.18)
-2.71 0.29 0.44 1.14 -0.36 -5.57 -2.04 -7.04 -1.65 -1.82 0.97 0.74 -0.01 -0.3 0.33 0.14 0.83 0.53 0.52 -0.16 0.39 -0.43
AMTR_s00111p00045510 (evm_27.TU.AmTr_v1.0_scaffold00111.22)
0.0 -3.06 - 2.37 0.67 - -1.19 -3.64 -1.19 -1.03 0.97 0.61 0.11 -1.11 0.42 -0.28 0.76 -0.9 -0.59 0.08 -1.06 0.05
AMTR_s00113p00102950 (evm_27.TU.AmTr_v1.0_scaffold00113.21)
-0.72 -0.16 -0.61 2.83 1.13 - -8.69 - -10.14 -8.37 -0.59 -0.88 0.43 -0.52 -0.07 -5.35 -0.84 0.93 0.05 0.42 0.57 -7.68
AMTR_s00129p00057380 (evm_27.TU.AmTr_v1.0_scaffold00129.31)
-0.04 0.97 - 2.3 -0.14 -0.68 -4.2 -7.38 -3.78 -3.95 0.5 -0.16 0.34 -0.6 0.83 -2.11 1.45 -1.69 -1.41 0.0 -1.23 0.42
AMTR_s00133p00080150 (evm_27.TU.AmTr_v1.0_scaffold00133.33)
0.05 0.86 0.47 1.57 -0.58 -3.61 0.01 -1.77 -0.45 -0.4 0.44 0.3 0.36 0.13 -0.97 0.78 -0.27 -0.59 -0.56 -0.81 -0.75 -0.45
AMTR_s00146p00052750 (evm_27.TU.AmTr_v1.0_scaffold00146.28)
-0.78 0.51 -0.61 2.32 -0.67 -4.98 -3.22 -1.16 -1.54 -2.08 0.37 0.95 0.11 0.13 -0.87 -1.76 1.09 0.13 -0.23 -0.32 -1.18 -0.01
AMTR_s00157p00050850 (evm_27.TU.AmTr_v1.0_scaffold00157.17)
-0.64 -1.96 0.06 1.48 -1.56 - -1.54 -5.27 -0.5 -0.99 0.97 1.33 -0.02 -0.05 0.65 0.21 1.25 -0.61 -0.49 -0.18 -1.02 0.11
AMTR_s00157p00052260 (evm_27.TU.AmTr_v1.0_scaffold00157.18)
-1.18 0.15 0.12 1.69 -0.67 - -1.27 -1.81 -0.79 -0.9 1.12 0.64 0.29 -0.09 0.83 -0.21 1.1 -1.08 -1.15 -0.41 -2.88 0.26
AMTR_s00170p00065620 (evm_27.TU.AmTr_v1.0_scaffold00170.32)
-1.62 -0.58 -1.34 2.1 1.05 -7.37 -7.47 -7.52 -7.63 -7.66 0.09 0.22 0.04 -0.47 0.46 -0.58 0.25 0.69 0.57 0.2 1.01 -0.37
AMTR_s01033p00010870 (evm_27.TU.AmTr_v1.0_scaffold01033.1)
-0.13 - -0.23 0.79 -3.27 -3.75 -0.0 - -0.1 0.01 1.65 -0.1 1.0 -0.62 -1.75 -1.08 1.2 0.52 0.6 0.24 -0.86 -0.1
AMTR_s01500p00007820 (evm_27.TU.AmTr_v1.0_scaffold01500.1)
1.4 - - 2.61 -0.51 - -1.13 - -0.8 -1.52 0.98 0.08 -2.33 -2.34 -3.24 -2.48 2.64 -1.11 -0.91 -2.94 - -3.29
AMTR_s04298p00004120 (evm_27.TU.AmTr_v1.0_scaffold04298.1)
- - - 2.14 -4.07 - -3.01 - -1.25 -1.57 2.09 0.86 -0.42 0.6 -0.83 -0.92 1.84 -1.55 -0.94 0.03 -0.12 -0.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.