Heatmap: Cluster_241 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo432354 (PACid_15402783)
-1.67 -2.35 -2.52 -2.65 - -1.07 - 0.6 -4.3 - - -0.78 -1.1 -3.09 -0.09 - -2.1 -1.54 - - 4.41 - - - - 2.13 - - -1.28 -2.2 -2.23 -
Smo85878 (PACid_15422987)
-3.15 -2.02 -0.83 -2.2 - -1.08 -1.5 0.19 -0.25 -1.66 - -2.61 -0.23 -1.19 0.32 -2.71 - -0.35 -0.88 - 4.09 - - -3.86 -1.92 2.47 - - -2.38 -1.94 -3.98 -3.05

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.