Heatmap: Cluster_64 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
1.59 5.52 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.89 2.05 -3.14 - - - 0.03 -2.34 - - -1.09 1.53 -0.13 0.69 - - -3.59 0.89 - 1.25 0.62 -1.27 -0.24 0.58 - -0.49 -0.29 - - -0.14 - 1.22 - - 2.15 -0.07 -0.01 1.42 -0.3 -0.34 -1.23 -0.48 0.94 2.88 -0.43 1.23 - - -
0.39 3.35 -0.36 -1.48 -1.78 0.15 -5.48 -1.74 -3.05 - -2.2 -1.06 -1.32 1.91 0.64 0.17 -2.91 0.1 - 1.03 -1.1 -0.05 -1.06 0.23 - 0.05 -0.28 -0.15 -0.53 - -1.07 1.16 -0.38 0.81 0.36 0.56 -1.0 0.82 - -1.67 -0.62 -0.25 0.31 0.41 0.21 0.48 - - -
0.98 3.81 0.74 -1.76 -0.71 2.97 - -0.22 -0.03 -4.4 -2.87 0.14 0.36 1.07 - - 0.22 -2.34 - -0.78 -0.9 -1.97 -4.66 -0.22 - 0.22 0.22 - - - - 1.17 - - - - - 0.17 - -2.38 0.2 0.22 0.18 -1.15 -0.3 0.91 - - -
- 4.39 - - - - - - - - - - - 4.7 - - - - - - -5.57 - - 1.03 - - - - - - - - - - - - - - - - - - - - - - - - -
-1.23 4.42 -1.27 - 1.92 1.03 - - 1.05 - -3.29 - - - - - 2.79 1.23 - -4.3 -0.81 -1.77 - - - - - - - - - 2.05 - - - - - - - - - -1.1 -0.1 -1.6 - 1.42 - - -
0.62 3.69 -0.72 - - -1.55 - - -0.3 - 0.68 -0.72 -1.74 3.97 - - - -0.95 - - -4.32 - -3.3 1.49 - -25.5 - - - - - 2.76 - - - - - - - -3.25 -4.55 -3.52 - -1.13 1.88 - - - -
2.04 5.38 - - - - - - - - - - - - - - - - - - - - - 1.68 - - - - - - - - - - - - - - - - - - - - - - - - -
-2.45 3.86 - - - 1.46 - -1.99 0.94 - -2.3 -0.13 - 0.63 - 2.14 - -3.08 3.06 -0.3 -2.43 -1.01 -3.06 -0.77 - 2.0 1.62 - - - - 1.59 - - - - - - - -0.72 -1.26 -2.04 -2.14 -3.08 - - - - -
0.36 4.73 - - - - - - - - - - - - - - - - - - 1.4 - - - - - - - - - - 4.22 - - - - - - - - - - - - - - - - -
-1.87 3.71 0.58 - 0.04 3.56 - - 2.52 -0.57 0.78 - - 0.88 - - - - - - - - - -0.96 - - - - - - 1.75 2.46 - - - - 0.79 - - - -2.68 - - -3.62 - - - - -
0.85 2.98 -0.49 0.59 0.56 1.31 - -2.77 -0.26 - -4.24 - - 3.19 - - - - - -0.77 -1.53 -2.41 0.06 0.52 - - - 0.6 - 0.4 - 2.41 0.54 1.03 - - 1.41 - - -2.22 -1.48 -0.24 - - - 1.57 - -0.63 -
-0.57 4.69 -0.59 - - - - - - - 0.55 1.16 - 1.35 - - - - - 1.34 - - - 1.79 - - - - - - - 2.94 - - - - - - - -0.23 - - 0.19 - - - - - -
-0.78 4.92 - - 2.15 - - - - - 1.03 - - - - - - - - - - -0.8 - 2.16 - - - - - - - 2.73 - - - - - - - - - - - - - - - - -
-3.05 1.07 -3.32 -3.58 -1.53 0.9 -3.79 -3.02 1.14 -4.57 -3.16 -1.39 -0.03 -0.22 -3.38 - -3.76 -1.34 - -0.9 -0.95 -1.29 -2.82 -1.21 -1.74 -3.18 -4.76 -1.68 -0.36 2.36 0.9 1.65 -0.72 -2.78 0.09 0.15 -0.45 0.12 -0.21 -2.01 0.15 -0.69 0.45 0.6 -2.43 -1.2 2.51 2.39 1.71
-1.32 2.13 - -1.1 2.35 3.19 -4.12 -4.04 - -2.08 -2.29 - -0.0 2.77 - - -0.79 -2.2 - -4.64 -0.86 -0.08 -2.36 1.38 - - - - -0.94 - 1.47 2.26 0.36 - -0.81 -0.77 - 0.74 0.57 -2.13 -1.49 -0.58 -0.3 -1.62 - - - - -
1.63 4.94 - - - - - - - - -0.49 - - - - - - - - - -0.05 -1.57 - 1.77 - - - - - - - 3.3 - - - - - - - - - - - - - - - - -
-0.34 4.05 - - 1.62 2.55 - - 0.35 - -2.91 0.81 - - - - -1.09 -3.54 - -4.73 -1.8 - -1.14 0.62 - - - - - - - 1.35 3.51 - - - - - - - -1.28 -0.3 0.58 - - - - - -
-0.35 5.41 - - - - - - - - - - - - - - - - - - - 1.7 - 1.27 - - - - - - - - - - - - - - - - - - - - - - - - -
-4.72 3.49 - - 0.85 1.66 -1.34 - 0.0 - -0.1 2.95 - 3.24 - - -4.39 -2.17 - -2.12 -4.12 -3.66 -3.14 0.32 - -0.31 -1.85 - - -14.87 - 3.07 - - - 0.35 - - - -9.03 -1.58 -2.7 - -8.23 - - - - -
1.44 5.27 - - - - - - - - - - - 2.95 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 4.31 - - - 1.78 - - 0.62 - - 3.49 - - - - - 0.55 - -0.41 - -0.09 - 0.85 - - - - - - - 2.98 - - - - - - - - - - - - - - - - -
0.47 5.28 - - - - - - - - - - - - - - - - - - - - - 1.11 - - - - - - - 2.42 - - - - - - - - - - - 0.43 - - - - -
- 5.48 - - - - - - - - 1.48 - - - - - - - - - - - - 0.6 - - - - - - - - - - - - - - - - - - - - - - - - -
-1.76 3.27 -0.42 - - 1.75 - - - - - - - 4.15 - - - - - - - - -1.37 0.86 - 1.8 - - - - - - - - - - - - - - - - - 3.13 1.45 - - - -
0.72 4.29 - - - 0.83 0.76 2.11 - - -3.12 - - - - - -1.26 - - -5.82 -2.28 -2.24 - 0.53 - - - - - - - 1.84 - - - - - - - - - - - 3.81 - - - - -
-1.78 4.1 -3.36 - -1.02 0.87 - - 1.32 -2.56 1.07 - - 3.64 - - - - - -3.54 -3.56 -3.83 -3.02 0.37 - -0.39 - - - - - 2.23 - 0.31 - - - 0.42 - -3.5 - -2.73 - - -0.53 - 0.43 - -
0.3 3.89 -0.03 -2.34 - 0.68 -4.97 - - - -0.49 0.34 -0.07 -0.9 -0.4 - -2.28 -0.54 - -0.48 -2.32 0.43 -3.25 0.95 1.32 0.9 - - - 1.57 - 2.24 - - - 1.68 - - - -1.8 -0.96 -1.04 -1.01 -2.83 0.7 0.23 - -0.45 -
-1.41 3.21 -2.0 - -1.24 -1.05 - - 0.12 - -0.87 -0.6 - 3.72 - - - - - -1.98 -1.16 -4.78 -2.32 0.83 - 0.72 - - - -0.73 - 3.57 - - - 0.85 - 0.81 1.17 - - - -3.38 - - - - - -
-2.07 3.76 - - 0.63 2.88 - -1.89 2.59 0.94 -1.89 - - 2.85 - - - - - - -1.57 - -1.58 -1.97 - - - - - - - 2.4 - - - - - - - 0.09 -1.66 -3.07 0.85 - 0.12 - - - -
-0.33 3.88 -1.78 - - - - - 2.84 - 1.14 -1.23 - 2.6 - - -1.92 -3.25 - -2.45 -2.4 -2.12 -2.79 1.5 - - - - - 0.77 - 3.5 - - - - - - - - -2.03 - - -2.66 - - - - -
-0.45 4.05 -0.54 - - - - - 0.57 - 1.51 - - 2.94 - - - -1.86 - - - -1.25 -2.1 1.22 - - - - - - - 3.6 - - 1.7 - - - - -1.47 - - - - - - - - -
0.6 4.18 - - - 4.63 - - - - - - - - - - - - - - - - - - - - - - - - - 2.17 - - - - - - - - - - - - - - - - -
-0.13 4.1 - - - - - - 3.1 - - - - - - - - - - - - - - - - - - - - - - 3.37 - - - - - - 3.52 - - - - -0.6 - - - - -
-1.51 3.37 - -0.64 0.8 2.96 - - 0.57 - -1.0 - - 4.18 - - - - - - -0.22 -1.79 0.46 -0.12 - - - - - - - 0.31 - - - - - - 1.54 -1.88 -2.08 - - - - - - - -
-3.16 1.93 -0.69 - 1.29 1.38 -3.11 -1.04 1.63 -1.88 -1.31 -0.35 0.21 1.66 - 0.22 -3.19 -2.86 - -1.96 -1.05 0.9 -0.32 0.6 - -1.51 - 1.7 - 0.81 0.36 2.52 0.42 - -0.02 - -0.65 -1.35 -3.06 -1.77 -0.18 -0.21 0.56 0.61 -0.3 -0.89 -0.61 -0.53 -
0.26 4.01 -0.58 - 1.47 3.76 - - -1.2 - -3.55 - -0.79 0.81 - - -2.89 -1.39 - 0.17 -3.28 -3.72 -3.84 -0.57 - 0.13 1.85 - - - 0.01 1.18 - - - - - - - - -2.83 -1.36 -2.02 - - - - -0.77 -
- 4.71 - - - - - - 3.52 - - - - - - - - - - - - - - - - - - - - - - 3.51 - - - - - - - - - - - - - - - - -
2.26 5.08 - - - - - - 3.36 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.23 4.67 - - - - - - 0.33 - 0.27 - - - - - - -0.52 - - - 0.12 - 0.99 3.42 - - - - - - 2.64 - - - - - - - - - - - - - - - - -
0.95 4.37 2.03 - - 1.68 - - 2.09 1.73 1.03 - - - - - - - - - - - - -1.21 - - - - - 2.26 - 2.1 - - - - - - - - - - - - - - - - -
-2.37 3.35 -2.95 - - 3.77 -0.54 1.37 1.79 -19.37 -6.12 - - - - - - -28.35 - -3.81 -3.43 -4.83 - -19.93 - 1.48 -11.33 - 1.32 - - - - - - - - - - - -2.01 -1.63 - 0.15 1.25 3.09 - - -
-0.36 4.69 - - - - - - 3.69 - - - - - - - - - - - - - - - - - - - - - - 3.24 - - - - - - - - - - - - - - - - -
- 4.93 1.18 - -0.11 - - - - - - - - - - - -0.97 - - - 0.98 0.57 - 1.27 - - - - - - - 3.17 - - - - - - - - - - - - - - - - -
0.25 4.06 -1.74 - 0.35 3.15 - - 1.85 - -1.45 - - - - - - - - -1.34 - -1.4 -2.32 0.85 - 0.99 - - - - - 3.53 - - - - - - - - -1.21 - - - - - - - -
-2.81 3.0 -3.89 -3.01 1.96 2.9 -3.86 -12.93 0.66 -4.0 -5.32 - - 2.5 - - -4.04 -5.37 - -2.31 0.02 -1.52 -1.26 -0.01 - -0.73 - 1.09 0.77 - -0.49 2.79 -0.39 - - -0.57 -0.37 - 0.63 -1.82 -2.16 -0.73 -0.03 -1.43 -0.85 - - - -
-2.52 4.37 - - 3.39 - - - 0.66 - 0.71 1.53 - - - - - - - -0.22 - - - -0.83 - - - - - - - 3.28 - - - - - - - - -1.15 - - - - - - - -
-0.38 3.91 - - - 1.9 0.02 - 3.23 - -0.77 - - - - - - -2.25 - - -1.38 - - 0.6 - - - - - - - 4.03 - - - - - - - - - - - - - - - - -
3.05 4.78 - - 3.74 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.31 2.23 -1.59 - -1.18 -0.42 -4.34 -1.19 1.06 -2.52 0.03 2.36 -2.75 2.96 - - -1.66 0.15 - -1.46 -2.36 -1.31 -4.87 0.46 - 2.7 -0.54 - - - - 1.3 - - -0.82 - -0.29 - - -3.73 -2.55 -3.92 - 0.29 2.14 2.14 - - -
- 5.0 - - - - - - 2.21 -0.19 -3.08 0.66 - - - - - - - - - - -1.19 1.04 - - - - - - - 2.82 - - - - - - - - - - - -2.0 - - - - -
-3.43 4.2 - - 0.49 - - - - - -4.93 - - 4.0 - - - -1.29 - - -1.88 -1.78 -1.34 1.38 - - - - - - - - - - 1.56 - 0.84 - - -1.75 0.44 0.85 -0.15 - - - - - -
0.72 3.71 - - -2.06 1.46 - -3.0 -1.54 - -2.51 1.54 - - - - - -1.66 - - - -3.47 -4.0 0.79 - 2.71 - - - - - 1.88 - - - - - - - - - - -2.21 -1.69 3.37 1.49 0.75 - -
- 5.46 - - - - - - - - - - - - - - - - - - - - - 2.29 - - - - - - - - - - - - - - - - - - - - - - - - -
-2.25 4.03 - - - - - - 1.99 - - - - - - - - - - -4.36 1.2 - -1.1 0.36 - - - - - 1.68 - 2.25 - - 2.66 2.09 - - - -0.37 - - 1.2 1.48 - - - - -
-0.04 4.32 - - - 2.9 - - - - - - - 3.4 - - 1.25 -1.46 - -2.8 -1.75 - -2.65 -0.39 - - 1.26 - - - - - - - - - - - - - -0.9 - - -1.65 - 1.38 - - -
-1.74 4.3 - - - - - -2.03 0.75 0.73 0.93 -0.26 - 2.09 - - - - - - -1.09 - -1.77 1.79 - - - - - - - 3.79 - - - - - - - -2.32 -2.17 - - - - - - - -
0.87 4.79 - - - - - - 1.13 - 1.24 2.48 - - - - - 0.32 - -0.61 - - - -0.34 - - - - - - - 1.97 - - - - - - - - - - - 1.42 - - - - -
-0.53 3.78 - - - 3.29 - - - - -2.88 - - 1.02 - - - - - - - -1.02 - -0.14 - 1.3 - - - - - 2.87 - - - - - - - -2.07 - -1.35 - 0.73 2.0 2.38 - - -
-1.01 4.33 - - - 1.86 - - - - - -0.36 - - - - - - - - - -2.67 -2.37 0.75 - 0.99 - - - - - 2.63 - - - - - - - - - - - 3.59 - - 0.8 - -
-1.33 3.71 -1.71 -1.9 - 0.76 - -2.85 -0.91 - 0.43 -1.32 - - - - -0.5 -1.47 4.09 - -1.8 -2.74 -2.86 -0.21 - - - - - - - 2.45 - - - - - 0.24 - -1.16 -0.5 0.12 0.57 - - - - - -0.15
-0.74 5.12 - - - - - - - - - - - - - - - - - - 0.77 - - 1.01 - - - - - - - 3.32 - - - - - - - - - - - - - - - - -
-1.65 4.79 - - - - - - 2.59 - - - - - - - - - - - - - - 1.55 - - - - - - - 3.6 - - - - - - - - - - - - - - - - -
0.12 3.95 - -0.76 - - -0.22 2.35 1.3 - - -0.63 - -0.38 - - -2.41 -2.09 - -6.0 -2.75 -2.87 - -0.31 - - - - - - - 1.89 - - - - - - - - - -0.43 - 0.34 3.65 1.16 - - -
-1.42 3.9 - - - 0.53 -1.37 1.52 - - -2.09 2.69 - - - - - - - - - 0.34 -1.77 0.21 - - - - - - - 3.52 - - - - - - - -1.69 - -0.93 -0.86 - - - 2.74 - -
-4.03 4.37 -1.16 - - - - -2.36 - - - - - -0.2 - - -2.59 - - -4.99 -3.49 -2.56 -2.4 1.16 - -0.38 - - - - - 3.02 - - - - - - - 1.89 3.09 -0.76 -0.73 -2.65 - - - - 0.46
0.18 5.39 - - - - - - - - - - - - - - - - - - - 0.93 - 2.05 - - - - - - - - - - - - - - - - - - - - - - - - -
-1.07 2.42 -0.65 0.46 -2.27 -0.67 -1.15 0.71 0.42 -1.24 -0.65 0.49 0.24 1.72 -1.74 -0.87 -0.27 -0.8 - 0.35 -1.62 -0.62 -1.57 -0.44 -1.74 -0.76 -3.01 -1.82 -3.07 -0.82 -1.47 1.83 -1.92 - -0.32 -1.97 -1.94 -0.9 -2.2 -2.08 -1.35 -0.62 -1.41 1.8 1.23 2.26 -0.86 0.39 1.01
-2.04 4.25 - 0.15 -1.28 3.88 -1.89 - 3.12 - - - - - - - - - - -1.66 - - - -0.31 - - - - - - - 1.0 - - - - - - - -2.03 - - - - - 0.26 - - -
-0.79 3.99 - 0.01 - 0.85 - - 0.77 - -0.26 1.04 - 0.49 - - -1.04 -3.46 3.41 - -3.19 - -3.26 0.66 - 0.47 - 0.56 - - - 2.82 - - - - - - - - -2.79 - - -0.54 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.